Strain Fitness in Escherichia coli BW25113 around b3334

Experiment: Cephalothin 0.01 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cephalothin 0.01 mg/ml
3,462,115	+	yheK	b3333	0.15	+0.2
3,462,124	+	yheK	b3333	0.15	+1.1
3,462,124	+	yheK	b3333	0.15	+0.5
3,462,124	+	yheK	b3333	0.15	-1.3
3,462,132	-	yheK	b3333	0.16	-0.3
3,462,137	+	yheK	b3333	0.17	+2.7
3,462,142	+	yheK	b3333	0.17	-1.1
3,462,142	+	yheK	b3333	0.17	-1.8
3,462,155	-	yheK	b3333	0.18	+0.7
3,462,167	-	yheK	b3333	0.19	-1.1
3,462,167	-	yheK	b3333	0.19	+0.5
3,462,187	-	yheK	b3333	0.21	-1.1
3,462,204	-	yheK	b3333	0.22	+0.5
3,462,205	+	yheK	b3333	0.22	+0.5
3,462,246	-	yheK	b3333	0.26	+0.0
3,462,246	-	yheK	b3333	0.26	-1.1
3,462,246	-	yheK	b3333	0.26	-1.1
3,462,276	-	yheK	b3333	0.29	-0.7
3,462,294	-	yheK	b3333	0.30	-0.1
3,462,302	+	yheK	b3333	0.31	+1.3
3,462,302	+	yheK	b3333	0.31	-0.5
3,462,312	+	yheK	b3333	0.32	-0.7
3,462,320	-	yheK	b3333	0.32	-0.1
3,462,399	-	yheK	b3333	0.39	+0.8
3,462,400	-	yheK	b3333	0.39	-0.1
3,462,417	-	yheK	b3333	0.41	-0.1
3,462,417	-	yheK	b3333	0.41	-0.3
3,462,421	-	yheK	b3333	0.41	-0.5
3,462,421	-	yheK	b3333	0.41	-1.1
3,462,459	-	yheK	b3333	0.44	+0.9
3,462,461	+				+1.5
3,462,469	-	yheK	b3333	0.45	+1.1
3,462,478	-	yheK	b3333	0.46	+0.3
3,462,503	-	yheK	b3333	0.48	-0.5
3,462,506	+	yheK	b3333	0.48	+1.5
3,462,506	+	yheK	b3333	0.48	+0.0
3,462,506	+	yheK	b3333	0.48	-0.8
3,462,506	+	yheK	b3333	0.48	+0.9
3,462,512	+	yheK	b3333	0.49	-2.7
3,462,512	+	yheK	b3333	0.49	-0.2
3,462,514	+	yheK	b3333	0.49	-0.3
3,462,520	-	yheK	b3333	0.49	+0.2
3,462,520	-	yheK	b3333	0.49	+0.3
3,462,522	-	yheK	b3333	0.50	+0.2
3,462,527	-	yheK	b3333	0.50	-1.1
3,462,537	+	yheK	b3333	0.51	-0.4
3,462,540	+	yheK	b3333	0.51	-0.7
3,462,545	-	yheK	b3333	0.52	-0.3
3,462,547	+	yheK	b3333	0.52	+0.1
3,462,593	+	yheK	b3333	0.56	-1.5
3,462,593	+	yheK	b3333	0.56	-0.5
3,462,621	-	yheK	b3333	0.58	-0.7
3,462,690	-	yheK	b3333	0.64	-0.8
3,462,690	-	yheK	b3333	0.64	+1.1
3,462,763	-	yheK	b3333	0.70	-0.5
3,462,763	-	yheK	b3333	0.70	-0.7
3,462,837	+	yheK	b3333	0.77	+6.0
3,462,837	+	yheK	b3333	0.77	+5.5
3,462,864	+	yheK	b3333	0.79	+0.3
3,462,870	+	yheK	b3333	0.80	+1.0
3,462,870	+	yheK	b3333	0.80	+0.5
3,462,878	-	yheK	b3333	0.80	+1.3
3,462,891	-	yheK	b3333	0.81	-1.1
3,462,905	+	yheK	b3333	0.83	-0.1
3,462,907	+	yheK	b3333	0.83	-0.9
3,462,915	+	yheK	b3333	0.83	+1.1
3,462,928	+	yheK	b3333	0.85	-1.5
3,462,928	-	yheK	b3333	0.85	-0.3
3,462,928	-	yheK	b3333	0.85	+0.1
3,462,945	+	yheK	b3333	0.86	+2.5
3,462,948	-	yheK	b3333	0.86	-2.1
3,462,956	-	yheK	b3333	0.87	+0.5
3,462,996	-				-2.1
3,462,996	-				-1.0
3,462,999	+				+1.1
3,463,002	-				+1.8
3,463,007	-				-1.1
3,463,022	+				+0.4
3,463,022	+				+1.5
3,463,030	-				+0.1
3,463,032	+				+1.0
3,463,032	+				-0.8
3,463,040	-				+1.2
3,463,040	-				+0.2
3,463,040	-				+0.2
3,463,040	-				+0.8
3,463,040	-				-1.5
3,463,076	+				-0.7
3,463,077	+				-2.1
3,463,081	-				-1.8
3,463,084	-				+0.5
3,463,085	-				+0.0
3,463,085	-				-0.5
3,463,085	-				+1.5
3,463,085	-				+0.5
3,463,095	-				+0.1
3,463,115	-				-0.3
3,463,161	-	pshM	b3334	0.12	-0.3
3,463,161	-	pshM	b3334	0.12	+0.4
3,463,215	+	pshM	b3334	0.24	-0.8
3,463,217	+	pshM	b3334	0.24	-1.1
3,463,217	+	pshM	b3334	0.24	-0.8
3,463,217	+	pshM	b3334	0.24	-2.9
3,463,223	-	pshM	b3334	0.26	-1.5
3,463,233	+	pshM	b3334	0.28	+1.1
3,463,252	+	pshM	b3334	0.32	-1.1
3,463,270	+	pshM	b3334	0.36	-0.7
3,463,294	+	pshM	b3334	0.41	-1.8
3,463,302	-	pshM	b3334	0.43	-1.7
3,463,302	-	pshM	b3334	0.43	+0.0
3,463,393	-	pshM	b3334	0.63	+1.5
3,463,420	-	pshM	b3334	0.68	-0.5
3,463,420	-	pshM	b3334	0.68	-1.1
3,463,459	+	pshM	b3334	0.77	+0.4
3,463,459	+	pshM	b3334	0.77	-0.1
3,463,470	+	pshM	b3334	0.79	+1.3
3,463,470	+	pshM	b3334	0.79	+0.0
3,463,486	-	pshM	b3334	0.83	+1.8
3,463,486	-	pshM	b3334	0.83	-2.8
3,463,488	-	pshM	b3334	0.83	-1.9
3,463,519	-				-0.5
3,463,533	-				-1.1
3,463,535	-				+0.8
3,463,544	+				-1.1
3,463,546	+				+2.3
3,463,552	-				+1.3
3,463,624	+				-0.5
3,463,624	+				-1.1
3,463,639	-	gspO	b3335	0.11	-0.8
3,463,639	-	gspO	b3335	0.11	+0.5
3,463,640	-	gspO	b3335	0.11	-0.8
3,463,640	-	gspO	b3335	0.11	+0.5
3,463,647	-	gspO	b3335	0.12	-0.7
3,463,654	+	gspO	b3335	0.13	+1.5
3,463,654	+	gspO	b3335	0.13	-1.8
3,463,696	-	gspO	b3335	0.19	-0.5
3,463,716	+	gspO	b3335	0.22	-1.1
3,463,716	+	gspO	b3335	0.22	+0.5
3,463,717	+	gspO	b3335	0.22	-0.8
3,463,719	+	gspO	b3335	0.23	+1.1
3,463,719	+	gspO	b3335	0.23	-0.5
3,463,720	+	gspO	b3335	0.23	+0.1
3,463,720	+	gspO	b3335	0.23	+0.5
3,463,725	-	gspO	b3335	0.24	-0.3
3,463,728	-	gspO	b3335	0.24	-1.1
3,463,759	+	gspO	b3335	0.29	+1.4
3,463,767	+	gspO	b3335	0.30	-1.2
3,463,768	-	gspO	b3335	0.30	-0.3
3,463,775	+	gspO	b3335	0.31	+0.1
3,463,775	+	gspO	b3335	0.31	-0.5
3,463,775	-	gspO	b3335	0.31	-0.2
3,463,775	-	gspO	b3335	0.31	+1.1
3,463,777	+	gspO	b3335	0.31	+0.7
3,463,812	-	gspO	b3335	0.36	+2.1
3,463,832	-	gspO	b3335	0.39	+0.9
3,463,844	-	gspO	b3335	0.41	-0.7
3,463,858	+	gspO	b3335	0.43	+0.0
3,463,878	+	gspO	b3335	0.46	+2.5
3,463,893	+	gspO	b3335	0.48	-1.9
3,463,918	+	gspO	b3335	0.52	-0.3
3,463,918	+	gspO	b3335	0.52	-0.6
3,463,922	+	gspO	b3335	0.53	+0.7
3,463,963	+	gspO	b3335	0.59	+1.9
3,463,963	+	gspO	b3335	0.59	-1.1
3,463,965	+	gspO	b3335	0.59	+0.6
3,463,971	-	gspO	b3335	0.60	-0.8
3,463,974	-	gspO	b3335	0.60	+0.2
3,463,991	-	gspO	b3335	0.63	+0.1
3,463,995	-	gspO	b3335	0.63	-0.1
3,464,030	-	gspO	b3335	0.69	-0.2
3,464,062	+	gspO	b3335	0.73	+1.1
3,464,062	+	gspO	b3335	0.73	+1.5
3,464,063	-	gspO	b3335	0.73	-0.5
3,464,072	-	gspO	b3335	0.75	+1.1
3,464,100	+	gspO	b3335	0.79	+0.9
3,464,121	-	gspO	b3335	0.82	-0.5
3,464,121	-	gspO	b3335	0.82	-1.1
3,464,125	-	gspO	b3335	0.83	+0.4
3,464,126	-	gspO	b3335	0.83	+0.9
3,464,158	+	gspO	b3335	0.87	+0.4
3,464,192	+				+0.5
3,464,210	+				+0.0
3,464,210	-				+0.5
3,464,215	+				-0.5
3,464,215	+				-1.1
3,464,218	-				+0.4
3,464,249	+				-1.6
3,464,257	+				-0.4
3,464,266	-				+2.6
3,464,266	-				-1.4
3,464,294	-				+1.1
3,464,296	-				-0.9
3,464,330	+	bfr	b3336	0.12	+0.3
3,464,338	-	bfr	b3336	0.14	+1.1
3,464,360	-	bfr	b3336	0.19	+0.5
3,464,360	-	bfr	b3336	0.19	-1.1
3,464,406	-	bfr	b3336	0.28	+0.7
3,464,423	+	bfr	b3336	0.32	-0.4
3,464,427	-	bfr	b3336	0.33	+0.3
3,464,427	-	bfr	b3336	0.33	-0.2
3,464,427	-	bfr	b3336	0.33	-1.3
3,464,438	-	bfr	b3336	0.35	-0.5
3,464,473	-	bfr	b3336	0.42	+1.7
3,464,485	-	bfr	b3336	0.45	-0.2
3,464,498	-	bfr	b3336	0.48	-0.5
3,464,502	-	bfr	b3336	0.48	+0.1
3,464,503	-	bfr	b3336	0.49	+1.1
3,464,504	+	bfr	b3336	0.49	-0.7
3,464,504	+	bfr	b3336	0.49	-1.6
3,464,517	+	bfr	b3336	0.52	+2.1
3,464,523	+	bfr	b3336	0.53	-1.1
3,464,523	+	bfr	b3336	0.53	-0.5
3,464,523	+	bfr	b3336	0.53	+1.1