Strain Fitness in Escherichia coli BW25113 around b3025

Experiment: Cephalothin 0.01 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cephalothin 0.01 mg/ml
3,166,909	-	ygiV	b3023	0.29	-2.1
3,166,956	-	ygiV	b3023	0.38	+1.0
3,166,956	-	ygiV	b3023	0.38	-1.3
3,166,989	+	ygiV	b3023	0.45	+0.4
3,166,989	+	ygiV	b3023	0.45	-1.2
3,167,060	+	ygiV	b3023	0.60	-2.2
3,167,154	+	ygiV	b3023	0.79	-0.9
3,167,158	+	ygiV	b3023	0.80	+0.8
3,167,175	+	ygiV	b3023	0.84	+2.4
3,167,175	+	ygiV	b3023	0.84	-0.2
3,167,175	+	ygiV	b3023	0.84	-1.9
3,167,192	+	ygiV	b3023	0.87	-0.5
3,167,227	+				+0.8
3,167,422	-	ygiW	b3024	0.30	-0.6
3,167,470	+	ygiW	b3024	0.42	-0.0
3,167,470	+	ygiW	b3024	0.42	+1.0
3,167,470	+	ygiW	b3024	0.42	+1.4
3,167,478	-	ygiW	b3024	0.44	-1.4
3,167,478	-	ygiW	b3024	0.44	-0.2
3,167,500	-	ygiW	b3024	0.49	+1.0
3,167,500	-	ygiW	b3024	0.49	-0.6
3,167,512	+	ygiW	b3024	0.52	+0.4
3,167,652	+	ygiW	b3024	0.88	+1.2
3,167,718	-				+2.0
3,167,793	-				-0.1
3,167,793	-				+1.6
3,167,798	+				+0.7
3,167,800	+				-1.2
3,167,800	+				-0.3
3,167,800	+				-0.6
3,167,979	+	qseB	b3025	0.20	+2.0
3,167,987	-	qseB	b3025	0.21	+1.2
3,167,987	-	qseB	b3025	0.21	+0.6
3,168,014	-	qseB	b3025	0.25	+0.6
3,168,014	-	qseB	b3025	0.25	+1.5
3,168,045	+	qseB	b3025	0.30	-1.2
3,168,096	+	qseB	b3025	0.37	-0.8
3,168,108	+	qseB	b3025	0.39	+0.5
3,168,112	+	qseB	b3025	0.40	-0.8
3,168,179	-	qseB	b3025	0.50	+1.4
3,168,192	+	qseB	b3025	0.52	-0.2
3,168,235	+	qseB	b3025	0.58	+0.9
3,168,287	+	qseB	b3025	0.66	+1.1
3,168,288	+	qseB	b3025	0.66	-1.2
3,168,288	+	qseB	b3025	0.66	-0.2
3,168,345	+	qseB	b3025	0.75	+0.7
3,168,357	-	qseB	b3025	0.77	+1.4
3,168,357	-	qseB	b3025	0.77	+0.4
3,168,383	+	qseB	b3025	0.81	-0.3
3,168,388	-	qseB	b3025	0.82	+0.4
3,168,388	-	qseB	b3025	0.82	+2.4
3,168,407	+	qseB	b3025	0.84	+0.6
3,168,485	+				+0.8
3,168,499	-				+1.6
3,168,560	-				-0.4
3,168,678	-	qseC	b3026	0.13	+0.8
3,168,797	+	qseC	b3026	0.22	-0.6
3,168,806	-	qseC	b3026	0.22	-1.9
3,168,824	+	qseC	b3026	0.24	-0.6
3,168,852	+	qseC	b3026	0.26	+0.4
3,168,909	+	qseC	b3026	0.30	+0.4
3,168,943	-	qseC	b3026	0.32	-0.2
3,169,046	+	qseC	b3026	0.40	-0.2
3,169,087	+	qseC	b3026	0.43	+0.4
3,169,161	+	qseC	b3026	0.49	+0.4
3,169,194	+	qseC	b3026	0.51	+0.4
3,169,200	-	qseC	b3026	0.51	+1.4
3,169,246	-	qseC	b3026	0.55	-1.2
3,169,247	-	qseC	b3026	0.55	-0.4
3,169,265	-	qseC	b3026	0.56	+0.4
3,169,341	-	qseC	b3026	0.62	-0.6
3,169,397	+	qseC	b3026	0.66	-0.6
3,169,397	+	qseC	b3026	0.66	+1.0
3,169,419	-	qseC	b3026	0.68	-2.2
3,169,477	+	qseC	b3026	0.72	-1.2
3,169,485	-	qseC	b3026	0.73	-0.6