Strain Fitness in Escherichia coli BW25113 around b3001

Experiment: Cephalothin 0.01 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cephalothin 0.01 mg/ml
3,144,992	+	yghX	b4658	0.14	+1.9
3,144,992	+	yghX	b4658	0.14	+2.8
3,145,000	-	yghX	b4658	0.15	+2.1
3,145,000	-	yghX	b4658	0.15	+0.1
3,145,009	+	yghX	b4658	0.16	+3.2
3,145,010	-	yghX	b4658	0.16	-1.0
3,145,034	+	yghX	b4658	0.19	+0.4
3,145,042	-	yghX	b4658	0.20	-0.6
3,145,042	-	yghX	b4658	0.20	+1.7
3,145,042	-	yghX	b4658	0.20	-0.1
3,145,042	-	yghX	b4658	0.20	+1.9
3,145,052	-	yghX	b4658	0.21	-1.3
3,145,080	+	yghX	b4658	0.24	-0.6
3,145,085	+	yghX	b4658	0.25	+0.6
3,145,152	+	yghX	b4658	0.33	+0.2
3,145,157	+	yghX	b4658	0.33	+1.4
3,145,240	+	yghX	b4658	0.43	-1.2
3,145,496	-	yghX	b4658	0.74	-1.2
3,145,501	-	yghX	b4658	0.75	-1.8
3,145,507	+	yghX	b4658	0.75	+0.4
3,145,507	+	yghX	b4658	0.75	-0.2
3,145,573	+	yghX	b4658	0.83	-0.3
3,145,581	-	yghX	b4658	0.84	-0.3
3,145,581	-	yghX	b4658	0.84	+0.2
3,145,640	+				+0.4
3,145,641	-				-0.2
3,145,762	-				-0.4
3,145,770	-				+0.1
3,145,916	+				+0.0
3,145,954	+				-0.6
3,146,065	+	yghZ	b3001	0.14	-0.6
3,146,065	+	yghZ	b3001	0.14	-1.6
3,146,242	-	yghZ	b3001	0.31	+0.1
3,146,295	+	yghZ	b3001	0.36	-1.2
3,146,320	+	yghZ	b3001	0.39	-0.6
3,146,320	+	yghZ	b3001	0.39	-2.3
3,146,380	-	yghZ	b3001	0.44	+0.4
3,146,387	+	yghZ	b3001	0.45	+1.6
3,146,387	+	yghZ	b3001	0.45	+0.2
3,146,438	-	yghZ	b3001	0.50	-1.6
3,146,438	-	yghZ	b3001	0.50	-0.6
3,146,527	+	yghZ	b3001	0.58	+0.4
3,146,527	+	yghZ	b3001	0.58	-0.6
3,146,542	+	yghZ	b3001	0.60	-0.6
3,146,579	+	yghZ	b3001	0.63	-1.0
3,146,588	+	yghZ	b3001	0.64	-0.5
3,146,652	+	yghZ	b3001	0.70	-1.4
3,146,660	-	yghZ	b3001	0.71	-1.2
3,146,753	-	yghZ	b3001	0.80	+0.4
3,146,753	-	yghZ	b3001	0.80	+2.2
3,146,753	-	yghZ	b3001	0.80	-0.4
3,146,840	+	yghZ	b3001	0.88	-0.6
3,146,842	+	yghZ	b3001	0.89	-0.8
3,146,842	+	yghZ	b3001	0.89	+1.4
3,146,863	+				-0.6
3,146,863	+				+0.4
3,146,869	-				+1.1
3,146,971	-				+0.9
3,146,995	-				-1.2
3,147,027	+				+0.6
3,147,309	-	yqhA	b3002	0.63	-0.1
3,147,435	-	yqhA	b3002	0.88	+0.4
3,147,435	-	yqhA	b3002	0.88	-0.6
3,147,461	+				-0.4
3,147,526	+				+0.4
3,147,526	+				+0.4
3,147,531	-				+3.7
3,147,538	+				+0.5
3,147,538	+				+2.2
3,147,540	+				+1.1
3,147,540	+				+0.9
3,147,650	-				-2.0
3,147,713	+				+0.7
3,147,713	+				+0.4
3,147,713	+				-1.8
3,147,723	+				-0.2
3,147,783	-	yghA	b3003	0.11	+2.8
3,147,865	-	yghA	b3003	0.20	+1.4
3,147,865	-	yghA	b3003	0.20	-0.4