Strain Fitness in Escherichia coli BW25113 around b2961

Experiment: Cephalothin 0.01 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cephalothin 0.01 mg/ml
3,100,069	-	yggL	b2959	0.73	-0.2
3,100,069	-	yggL	b2959	0.73	-0.7
3,100,096	+	yggL	b2959	0.82	+1.0
3,100,181	+				+0.1
3,100,187	-				+2.2
3,100,187	-				-0.0
3,100,189	-				+1.6
3,100,189	-				+0.0
3,100,250	+	yggH	b2960	0.13	+0.3
3,100,250	+	yggH	b2960	0.13	+0.3
3,100,258	-	yggH	b2960	0.14	+0.8
3,100,258	-	yggH	b2960	0.14	+1.3
3,100,258	-	yggH	b2960	0.14	+2.7
3,100,260	-	yggH	b2960	0.15	+1.6
3,100,393	-	yggH	b2960	0.33	+2.0
3,100,406	-	yggH	b2960	0.35	+0.2
3,100,441	+	yggH	b2960	0.40	+0.7
3,100,441	+	yggH	b2960	0.40	+0.9
3,100,474	+	yggH	b2960	0.44	+0.3
3,100,521	-	yggH	b2960	0.51	+1.3
3,100,521	-	yggH	b2960	0.51	+1.2
3,100,568	-	yggH	b2960	0.57	+0.2
3,100,600	+	yggH	b2960	0.62	-1.0
3,100,600	+	yggH	b2960	0.62	-0.4
3,100,616	-	yggH	b2960	0.64	+0.2
3,100,827	-				+1.7
3,100,829	-				-1.0
3,100,974	+				-0.8
3,100,974	+				-1.7
3,100,974	+				-0.2
3,101,012	-				+1.0
3,101,070	-				+0.3
3,101,070	-				+0.9
3,101,122	+				-2.8
3,101,122	+				+2.1
3,101,124	+				-1.0
3,101,124	+				-1.7
3,101,251	+	mutY	b2961	0.21	-2.0
3,101,251	+	mutY	b2961	0.21	-1.3
3,101,259	+	mutY	b2961	0.21	-0.7
3,101,259	+	mutY	b2961	0.21	-0.3
3,101,430	+	mutY	b2961	0.38	-1.7
3,101,430	+	mutY	b2961	0.38	+0.3
3,101,456	-	mutY	b2961	0.40	+0.9
3,101,462	-	mutY	b2961	0.41	+0.0
3,101,462	-	mutY	b2961	0.41	-2.3
3,101,483	-	mutY	b2961	0.43	-0.3
3,101,483	-	mutY	b2961	0.43	-0.4
3,101,483	-	mutY	b2961	0.43	+0.7
3,101,483	-	mutY	b2961	0.43	-1.3
3,101,561	+	mutY	b2961	0.50	-0.3
3,101,605	+	mutY	b2961	0.54	-0.9
3,101,620	+	mutY	b2961	0.56	+0.3
3,101,811	-	mutY	b2961	0.74	+0.5
3,101,911	+	mutY	b2961	0.83	-1.8
3,101,942	+	mutY	b2961	0.86	-1.8
3,102,040	+				-0.5
3,102,152	+	yggX	b2962	0.13	+0.0
3,102,350	-	yggX	b2962	0.85	-1.3
3,102,350	-	yggX	b2962	0.85	-1.7
3,102,352	+	yggX	b2962	0.86	-1.7
3,102,352	+	yggX	b2962	0.86	-2.5
3,102,352	-	yggX	b2962	0.86	+0.3
3,102,443	-				+0.5
3,102,604	+	mltC	b2963	0.14	+1.3
3,102,604	+	mltC	b2963	0.14	-0.0
3,102,612	-	mltC	b2963	0.15	-0.2
3,102,622	-	mltC	b2963	0.15	+2.7
3,102,623	-	mltC	b2963	0.16	-0.1
3,102,623	-	mltC	b2963	0.16	+0.3
3,102,631	-	mltC	b2963	0.16	+1.7
3,102,636	+	mltC	b2963	0.17	+0.3
3,102,636	+	mltC	b2963	0.17	+0.1
3,102,636	+	mltC	b2963	0.17	+0.0
3,102,638	+	mltC	b2963	0.17	+1.9
3,102,638	+	mltC	b2963	0.17	+1.1
3,102,644	-	mltC	b2963	0.17	+2.3
3,102,644	-	mltC	b2963	0.17	-0.2
3,102,646	-	mltC	b2963	0.18	+0.3
3,102,648	+	mltC	b2963	0.18	+1.1
3,102,648	+	mltC	b2963	0.18	+1.5
3,102,676	-	mltC	b2963	0.20	+1.6
3,102,694	+	mltC	b2963	0.22	+1.6
3,102,700	-	mltC	b2963	0.23	-0.1
3,102,700	-	mltC	b2963	0.23	+0.3
3,102,729	+	mltC	b2963	0.25	-0.4
3,102,729	+	mltC	b2963	0.25	+0.9
3,102,737	-	mltC	b2963	0.26	+1.3
3,102,737	-	mltC	b2963	0.26	+1.2
3,102,789	+	mltC	b2963	0.31	+0.8
3,102,816	-	mltC	b2963	0.33	+1.2
3,102,858	+	mltC	b2963	0.37	+0.8
3,102,868	+	mltC	b2963	0.38	+0.0
3,102,960	-	mltC	b2963	0.47	+0.8
3,102,964	+	mltC	b2963	0.47	+0.9
3,102,964	+	mltC	b2963	0.47	+1.7
3,102,973	+	mltC	b2963	0.48	+1.1
3,102,974	-	mltC	b2963	0.48	-0.1
3,102,974	-	mltC	b2963	0.48	+0.3
3,102,985	+	mltC	b2963	0.49	-0.1
3,102,985	+	mltC	b2963	0.49	-2.0
3,102,992	-	mltC	b2963	0.50	+0.7
3,102,995	-	mltC	b2963	0.50	+2.2
3,103,017	-	mltC	b2963	0.52	+0.8
3,103,024	+	mltC	b2963	0.53	+0.8