Strain Fitness in Escherichia coli BW25113 around b2867

Experiment: Cephalothin 0.01 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cephalothin 0.01 mg/ml
2,999,700	-	xdhA	b2866	0.59	+0.3
2,999,765	+	xdhA	b2866	0.62	+0.9
2,999,878	-	xdhA	b2866	0.67	+0.0
2,999,898	+	xdhA	b2866	0.68	-1.3
2,999,898	+	xdhA	b2866	0.68	-0.7
2,999,939	+	xdhA	b2866	0.70	+1.5
2,999,950	-	xdhA	b2866	0.70	+1.6
2,999,950	-	xdhA	b2866	0.70	+0.3
3,000,004	+	xdhA	b2866	0.72	+1.1
3,000,004	+	xdhA	b2866	0.72	-2.3
3,000,080	-	xdhA	b2866	0.76	-0.0
3,000,115	-	xdhA	b2866	0.77	-0.7
3,000,115	-	xdhA	b2866	0.77	-1.7
3,000,119	+	xdhA	b2866	0.78	+0.3
3,000,128	+	xdhA	b2866	0.78	+0.3
3,000,136	-	xdhA	b2866	0.78	-1.5
3,000,228	-	xdhA	b2866	0.82	+0.3
3,000,270	+	xdhA	b2866	0.84	+0.3
3,000,384	-	xdhA	b2866	0.89	-0.2
3,000,421	-				+1.0
3,000,526	+				+0.9
3,000,526	+				-1.7
3,000,536	+				+1.0
3,000,561	+				+0.5
3,000,604	+				+0.3
3,000,656	-				-2.2
3,000,664	+				+1.3
3,000,669	+				-1.0
3,000,730	+	xdhB	b2867	0.11	-2.5
3,000,747	-	xdhB	b2867	0.13	+0.9
3,000,862	+	xdhB	b2867	0.26	-0.6
3,000,862	+	xdhB	b2867	0.26	-0.9
3,000,862	+	xdhB	b2867	0.26	-0.5
3,000,896	+	xdhB	b2867	0.30	+1.3
3,001,048	+	xdhB	b2867	0.47	-2.5
3,001,048	+	xdhB	b2867	0.47	+0.9
3,001,229	-	xdhB	b2867	0.67	-0.5
3,001,290	-	xdhB	b2867	0.74	+0.3
3,001,329	-	xdhB	b2867	0.79	-3.6
3,001,329	-	xdhB	b2867	0.79	-1.0
3,001,468	-				-0.5
3,001,567	+	xdhC	b2868	0.12	-0.3
3,001,567	+	xdhC	b2868	0.12	-0.3
3,001,616	+	xdhC	b2868	0.22	+0.3
3,001,616	+	xdhC	b2868	0.22	-0.7
3,001,665	+	xdhC	b2868	0.32	+1.4
3,001,678	-	xdhC	b2868	0.35	-0.1
3,001,691	-	xdhC	b2868	0.38	-0.9
3,001,745	+	xdhC	b2868	0.49	+1.9
3,001,756	+	xdhC	b2868	0.51	-0.2
3,001,776	+	xdhC	b2868	0.55	+0.6
3,001,859	-	xdhC	b2868	0.72	+0.2
3,001,940	+	xdhC	b2868	0.89	-0.3
3,001,948	-				+0.3
3,002,000	-				+0.3
3,002,034	+				-0.2
3,002,074	+				-0.2
3,002,223	-	ygeV	b2869	0.11	-1.3
3,002,224	-	ygeV	b2869	0.11	-0.1
3,002,224	-	ygeV	b2869	0.11	-1.1
3,002,249	-	ygeV	b2869	0.12	-0.7
3,002,254	-	ygeV	b2869	0.13	-1.3
3,002,276	+	ygeV	b2869	0.14	-0.1
3,002,276	+	ygeV	b2869	0.14	+1.4
3,002,293	+	ygeV	b2869	0.15	-1.5
3,002,379	+	ygeV	b2869	0.20	-0.6
3,002,407	+	ygeV	b2869	0.21	+0.1
3,002,436	-	ygeV	b2869	0.23	+0.3
3,002,490	-	ygeV	b2869	0.26	-0.4
3,002,490	-	ygeV	b2869	0.26	-0.6
3,002,490	-	ygeV	b2869	0.26	-0.0
3,002,501	+	ygeV	b2869	0.26	+0.3
3,002,505	-	ygeV	b2869	0.27	+0.3