Strain Fitness in Escherichia coli BW25113 around b2806

Experiment: Cephalothin 0.01 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cephalothin 0.01 mg/ml
2,937,173	+	fucU	b2804	0.62	-0.8
2,937,434	-				-0.4
2,937,434	-				+0.2
2,937,439	-				-0.8
2,937,473	-	fucR	b2805	0.11	-1.4
2,937,629	+	fucR	b2805	0.33	+0.8
2,937,677	-	fucR	b2805	0.39	-0.5
2,937,677	-	fucR	b2805	0.39	-0.4
2,937,681	+	fucR	b2805	0.40	+1.4
2,937,747	-	fucR	b2805	0.49	+0.2
2,937,769	+	fucR	b2805	0.52	+0.2
2,937,769	+	fucR	b2805	0.52	-1.1
2,937,811	-	fucR	b2805	0.58	-0.9
2,937,811	-	fucR	b2805	0.58	+0.2
2,937,817	+	fucR	b2805	0.58	-0.7
2,937,862	+	fucR	b2805	0.64	-0.8
2,938,088	+				-1.4
2,938,132	-				-0.5
2,938,204	-				+0.2
2,938,353	-	ygdE	b2806	0.17	+0.8
2,938,353	-	ygdE	b2806	0.17	+1.9
2,938,398	-	ygdE	b2806	0.21	+1.5
2,938,443	+	ygdE	b2806	0.25	-1.4
2,938,443	-	ygdE	b2806	0.25	-1.8
2,938,553	+	ygdE	b2806	0.35	-0.2
2,938,561	-	ygdE	b2806	0.36	-0.8
2,938,561	-	ygdE	b2806	0.36	-2.4
2,938,587	+	ygdE	b2806	0.38	-3.4
2,938,610	+	ygdE	b2806	0.40	-0.5
2,938,698	+	ygdE	b2806	0.48	-0.5
2,938,711	-	ygdE	b2806	0.50	+0.6
2,938,711	-	ygdE	b2806	0.50	+0.4
2,938,750	-	ygdE	b2806	0.53	-0.8
2,938,758	+	ygdE	b2806	0.54	-0.3
2,938,780	-	ygdE	b2806	0.56	-0.2
2,938,780	-	ygdE	b2806	0.56	+0.2
2,938,795	-	ygdE	b2806	0.57	-0.8
2,938,795	-	ygdE	b2806	0.57	+1.4
2,938,810	+	ygdE	b2806	0.59	+0.6
2,938,810	+	ygdE	b2806	0.59	-0.8
2,938,868	-	ygdE	b2806	0.64	-0.1
2,938,883	-	ygdE	b2806	0.65	+1.2
2,938,969	+	ygdE	b2806	0.73	-1.5
2,938,974	+	ygdE	b2806	0.73	-1.5
2,938,974	+	ygdE	b2806	0.73	-0.1
2,938,986	+	ygdE	b2806	0.75	-2.4
2,939,038	-	ygdE	b2806	0.79	-1.1
2,939,298	-	ygdD	b2807	0.10	-2.9
2,939,347	+	ygdD	b2807	0.22	-2.1
2,939,405	+	ygdD	b2807	0.37	-1.3
2,939,442	-	ygdD	b2807	0.46	-2.8
2,939,465	-	ygdD	b2807	0.52	+0.2
2,939,470	+	ygdD	b2807	0.54	-2.3
2,939,470	+	ygdD	b2807	0.54	-1.3
2,939,545	+	ygdD	b2807	0.72	-1.3
2,939,553	-	ygdD	b2807	0.74	-1.8
2,939,648	+				-3.1
2,939,648	+				-1.3
2,939,655	+				-2.1
2,939,663	-				-0.8
2,939,663	-				+0.7
2,939,778	-	gcvA	b2808	0.12	+3.4
2,939,778	-	gcvA	b2808	0.12	+3.0
2,939,804	+	gcvA	b2808	0.14	-2.1
2,939,912	-	gcvA	b2808	0.26	+3.9
2,939,914	-	gcvA	b2808	0.26	+3.9
2,939,982	-	gcvA	b2808	0.34	+3.6
2,939,982	-	gcvA	b2808	0.34	+3.9
2,939,985	-	gcvA	b2808	0.34	+3.4
2,939,987	-	gcvA	b2808	0.34	+2.7
2,940,001	+	gcvA	b2808	0.36	-0.3
2,940,068	+	gcvA	b2808	0.43	-0.8
2,940,171	-	gcvA	b2808	0.54	-0.8
2,940,171	-	gcvA	b2808	0.54	+1.8