Strain Fitness in Escherichia coli BW25113 around b2521

Experiment: Cephalothin 0.01 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cephalothin 0.01 mg/ml
2,649,566	+	yfhM	b2520	0.85	-2.4
2,649,602	+	yfhM	b2520	0.86	-1.0
2,649,608	-	yfhM	b2520	0.86	-1.0
2,649,608	-	yfhM	b2520	0.86	-2.0
2,649,695	+	yfhM	b2520	0.88	-1.4
2,649,695	+	yfhM	b2520	0.88	+0.6
2,649,701	-	yfhM	b2520	0.88	+0.5
2,649,720	+	yfhM	b2520	0.88	-0.2
2,649,787	-	yfhM	b2520	0.89	+0.0
2,649,787	-	yfhM	b2520	0.89	+1.6
2,650,071	-				+1.0
2,650,180	+				+2.2
2,650,180	+				-1.5
2,650,281	-				+0.6
2,650,328	-				+0.0
2,650,521	-				+0.2
2,650,627	-	sseA	b2521	0.13	+0.6
2,650,627	-	sseA	b2521	0.13	-0.4
2,650,638	-	sseA	b2521	0.14	+0.0
2,650,640	+	sseA	b2521	0.15	+0.0
2,650,640	+	sseA	b2521	0.15	-1.5
2,650,711	+	sseA	b2521	0.23	+0.0
2,650,829	+	sseA	b2521	0.37	-2.7
2,650,829	+	sseA	b2521	0.37	+1.4
2,650,829	+	sseA	b2521	0.37	+0.0
2,650,829	+	sseA	b2521	0.37	-1.0
2,650,911	+	sseA	b2521	0.47	-0.3
2,650,911	+	sseA	b2521	0.47	+0.5
2,650,924	+	sseA	b2521	0.48	-0.4
2,651,060	-	sseA	b2521	0.64	+0.5
2,651,060	-	sseA	b2521	0.64	+0.0
2,651,078	+	sseA	b2521	0.66	-1.8
2,651,091	-	sseA	b2521	0.68	+0.7
2,651,091	-	sseA	b2521	0.68	+0.0
2,651,105	+	sseA	b2521	0.70	-1.3
2,651,150	+	sseA	b2521	0.75	-0.5
2,651,195	+	sseA	b2521	0.80	-0.3
2,651,195	+	sseA	b2521	0.80	-2.3
2,651,231	+	sseA	b2521	0.85	+0.5
2,651,231	+	sseA	b2521	0.85	-0.2
2,651,245	-	sseA	b2521	0.86	-0.4
2,651,248	+	sseA	b2521	0.87	-0.5
2,651,254	+	sseA	b2521	0.87	-1.5
2,651,254	+	sseA	b2521	0.87	-1.3
2,651,293	+				-1.5
2,651,294	-				+1.5
2,651,294	-				+1.4
2,651,296	+				-1.8
2,651,296	+				+0.0
2,651,306	+				-0.6
2,651,418	+				+1.3
2,651,420	-				-0.6
2,651,420	-				-0.5
2,651,430	+				+0.9
2,651,441	+				+0.0
2,651,441	+				-1.0
2,651,442	+				-1.0
2,651,442	+				+0.4
2,651,443	+				+1.9
2,651,443	+				-0.3
2,651,443	+				-1.5
2,651,443	+				-0.2
2,651,446	+				-0.4
2,651,446	+				+0.0
2,651,446	+				+1.3
2,651,451	-				-1.0
2,651,454	-				+0.0
2,651,454	-				+0.5
2,651,455	+				+0.9
2,651,455	+				-0.5
2,651,455	+				-1.0
2,651,455	+				-1.0
2,651,457	+				+0.2
2,651,461	-				-0.5
2,651,461	-				+1.0
2,651,463	-				+0.0
2,651,479	+				-0.1
2,651,479	+				-0.7
2,651,541	+				+0.0
2,651,543	+				+1.0
2,651,553	+				+1.5
2,651,575	+				-2.0
2,651,575	+				+1.2
2,651,736	+				-0.5
2,651,755	+				+0.0
2,651,756	+				-0.2
2,651,756	+				+0.0
2,651,761	-				+0.0
2,651,763	-				+0.0
2,651,767	+				-0.4
2,651,773	-				-2.0
2,651,775	-				+0.0
2,651,775	-				+0.0
2,651,775	-				-1.0
2,651,775	-				-1.0
2,651,778	-				+0.0
2,651,781	-				-1.5
2,651,789	-				+1.0
2,651,792	+				-1.5
2,651,792	+				+1.6
2,651,792	+				-1.0
2,651,792	+				+0.4
2,651,792	+				+0.0
2,651,798	-				+0.0
2,651,798	-				-0.4
2,651,798	-				-1.5
2,651,798	-				-0.4
2,651,801	+				+0.6
2,651,801	+				-1.0
2,651,804	+				+0.4
2,651,809	-				-1.8
2,651,809	-				-0.2
2,651,809	-				+0.0
2,651,809	-				-0.7
2,651,809	-				-2.0
2,651,811	+				-1.0
2,651,812	-				-0.4
2,651,820	-				+0.5
2,651,822	-				-0.3
2,651,867	+				+0.3
2,651,867	+				-1.2
2,651,867	+				+0.7
2,651,867	+				+1.4
2,651,867	+				-1.5
2,651,867	+				+0.8
2,651,867	-				-0.2
2,651,870	+				+0.0
2,651,875	-				-1.0
2,651,875	-				+0.0
2,651,875	-				+0.0
2,651,875	-				+1.0
2,651,883	-				+0.5
2,651,884	+				+1.3
2,651,884	+				-0.5
2,651,890	-				-1.1
2,651,890	-				-1.0
2,651,890	-				-1.0
2,651,908	-	ryfA	b4440	0.10	+1.0
2,651,911	+	ryfA	b4440	0.11	+0.6
2,651,911	+	ryfA	b4440	0.11	-1.8
2,651,916	+	ryfA	b4440	0.13	+0.3
2,651,918	+	ryfA	b4440	0.13	-1.2
2,651,920	-	ryfA	b4440	0.14	-2.2
2,651,920	-	ryfA	b4440	0.14	+1.3
2,651,923	+	ryfA	b4440	0.15	-0.7
2,651,923	+	ryfA	b4440	0.15	-0.3
2,651,949	+	ryfA	b4440	0.24	+0.8
2,651,949	+	ryfA	b4440	0.24	-2.0
2,651,967	-	ryfA	b4440	0.30	-1.1
2,651,984	+	ryfA	b4440	0.35	-0.3
2,651,992	+	ryfA	b4440	0.38	-1.0
2,651,995	+	ryfA	b4440	0.39	-0.8
2,652,000	-	ryfA	b4440	0.40	-2.9
2,652,003	-	ryfA	b4440	0.41	+1.1
2,652,008	+	ryfA	b4440	0.43	-0.1
2,652,008	+	ryfA	b4440	0.43	-0.5
2,652,008	+	ryfA	b4440	0.43	-1.5
2,652,008	+	ryfA	b4440	0.43	+0.5
2,652,008	+	ryfA	b4440	0.43	+1.5
2,652,008	+	ryfA	b4440	0.43	+0.2
2,652,008	+	ryfA	b4440	0.43	+0.0
2,652,016	-	ryfA	b4440	0.46	+1.8
2,652,016	-	ryfA	b4440	0.46	-2.5
2,652,018	+	ryfA	b4440	0.46	+0.3
2,652,021	-	ryfA	b4440	0.47	-1.0
2,652,027	-	ryfA	b4440	0.49	+0.8
2,652,048	+	ryfA	b4440	0.56	+0.2
2,652,048	+	ryfA	b4440	0.56	+0.0
2,652,048	+	ryfA	b4440	0.56	-0.4
2,652,068	-	ryfA	b4440	0.63	-0.4
2,652,077	-	ryfA	b4440	0.66	+1.6
2,652,092	-	ryfA	b4440	0.71	+1.0
2,652,105	+	ryfA	b4440	0.75	+0.3
2,652,108	+	ryfA	b4440	0.76	+0.6
2,652,108	+	ryfA	b4440	0.76	+0.7
2,652,111	+	ryfA	b4440	0.77	+0.4
2,652,122	+	ryfA	b4440	0.81	-0.2
2,652,122	+	ryfA	b4440	0.81	+0.0
2,652,129	+	ryfA	b4440	0.83	-2.0
2,652,129	+	ryfA	b4440	0.83	-1.1
2,652,129	+	ryfA	b4440	0.83	+1.6
2,652,129	+	ryfA	b4440	0.83	-1.0
2,652,136	+	ryfA	b4440	0.85	+0.0
2,652,136	+	ryfA	b4440	0.85	+0.6
2,652,136	+	ryfA	b4440	0.85	-1.0
2,652,137	-	ryfA	b4440	0.86	-1.5
2,652,138	+	ryfA	b4440	0.86	+0.5
2,652,139	+	ryfA	b4440	0.86	-0.7
2,652,139	+	ryfA	b4440	0.86	+0.5
2,652,139	+	ryfA	b4440	0.86	+0.8
2,652,139	+	ryfA	b4440	0.86	+1.0
2,652,139	+	ryfA	b4440	0.86	-0.8
2,652,139	+	ryfA	b4440	0.86	+2.4
2,652,139	+	ryfA	b4440	0.86	-1.5
2,652,143	+	ryfA	b4440	0.88	+1.5
2,652,143	+	ryfA	b4440	0.88	-2.0
2,652,143	+	ryfA	b4440	0.88	-1.0
2,652,143	+	ryfA	b4440	0.88	+0.6
2,652,147	+	ryfA	b4440	0.89	-1.3
2,652,147	+	ryfA	b4440	0.89	-2.0
2,652,148	+	ryfA	b4440	0.89	-1.5
2,652,148	+	ryfA	b4440	0.89	+0.1
2,652,149	-	ryfA	b4440	0.89	-0.4
2,652,151	-				+0.3
2,652,156	-				+1.1
2,652,219	+				+0.0
2,652,219	+				+2.0
2,652,227	-				-1.0
2,652,227	-				+0.6
2,652,229	+				+0.5
2,652,239	-				+0.6
2,652,239	-				+1.0
2,652,251	-				-1.5
2,652,251	-				+0.0
2,652,255	+				-0.3
2,652,303	-	sseB	b2522	0.16	+1.0
2,652,303	-	sseB	b2522	0.16	+0.9
2,652,310	+	sseB	b2522	0.17	+1.3
2,652,318	-				+0.0
2,652,318	-	sseB	b2522	0.18	+0.0
2,652,318	-	sseB	b2522	0.18	-0.7
2,652,318	-	sseB	b2522	0.18	+0.0
2,652,318	-	sseB	b2522	0.18	-1.5
2,652,318	-	sseB	b2522	0.18	+1.6
2,652,322	+	sseB	b2522	0.18	+0.0
2,652,325	-	sseB	b2522	0.19	+1.2
2,652,326	-	sseB	b2522	0.19	-0.5
2,652,330	-	sseB	b2522	0.19	-1.0
2,652,330	-	sseB	b2522	0.19	-0.4
2,652,342	-	sseB	b2522	0.21	+0.5
2,652,342	-	sseB	b2522	0.21	-0.2
2,652,345	-	sseB	b2522	0.21	-2.0
2,652,345	-	sseB	b2522	0.21	-1.0