Strain Fitness in Escherichia coli BW25113 around b2305

Experiment: Cephalothin 0.01 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cephalothin 0.01 mg/ml
2,419,683	+				+0.9
2,419,689	+				+1.2
2,419,689	+				-0.1
2,419,697	-				+0.1
2,419,720	-				+0.7
2,419,720	-				+0.2
2,419,725	-				+0.4
2,419,726	+				+0.9
2,419,728	+				-0.8
2,419,736	-				-1.1
2,419,736	-				+0.2
2,419,809	+				-0.2
2,419,816	+				-0.3
2,419,816	+				-1.5
2,419,821	+	yfcH	b2304	0.10	+0.1
2,419,821	+	yfcH	b2304	0.10	+0.9
2,419,865	+	yfcH	b2304	0.15	-0.8
2,419,874	-	yfcH	b2304	0.16	-0.7
2,420,059	-	yfcH	b2304	0.37	-1.1
2,420,077	-	yfcH	b2304	0.39	-2.4
2,420,077	-	yfcH	b2304	0.39	-2.7
2,420,089	-	yfcH	b2304	0.40	-1.5
2,420,225	-	yfcH	b2304	0.55	+2.1
2,420,225	-	yfcH	b2304	0.55	-0.7
2,420,228	-	yfcH	b2304	0.56	+0.5
2,420,228	-	yfcH	b2304	0.56	+1.3
2,420,267	+	yfcH	b2304	0.60	+0.8
2,420,267	+	yfcH	b2304	0.60	-0.4
2,420,303	+	yfcH	b2304	0.64	-0.1
2,420,346	+	yfcH	b2304	0.69	-0.3
2,420,373	-	yfcH	b2304	0.72	-0.1
2,420,373	-	yfcH	b2304	0.72	+1.0
2,420,404	-	yfcH	b2304	0.75	+1.8
2,420,404	-	yfcH	b2304	0.75	-0.1
2,420,450	-	yfcH	b2304	0.81	+0.1
2,420,450	-	yfcH	b2304	0.81	-0.2
2,420,487	+	yfcH	b2304	0.85	-1.9
2,420,487	+	yfcH	b2304	0.85	-0.3
2,420,495	-	yfcH	b2304	0.86	+0.1
2,420,521	+	yfcH	b2304	0.88	-0.1
2,420,526	+	yfcH	b2304	0.89	-2.1
2,420,632	+				-0.4
2,420,654	+				+0.3
2,420,677	-				-0.7
2,420,680	-				+1.2
2,420,758	-				+1.3
2,420,758	-				-0.7
2,420,772	+	yfcI	b2305	0.11	-1.7
2,420,775	-	yfcI	b2305	0.12	+0.3
2,420,775	-	yfcI	b2305	0.12	-0.1
2,420,784	-	yfcI	b2305	0.13	-1.2
2,420,801	-	yfcI	b2305	0.15	+0.2
2,420,932	+	yfcI	b2305	0.29	+1.4
2,420,932	+	yfcI	b2305	0.29	-2.4
2,420,953	-	yfcI	b2305	0.32	-0.2
2,420,966	-	yfcI	b2305	0.33	+0.8
2,420,987	+	yfcI	b2305	0.35	+0.9
2,420,990	+	yfcI	b2305	0.36	+0.7
2,420,990	+				-0.1
2,420,990	+	yfcI	b2305	0.36	-1.1
2,420,998	-	yfcI	b2305	0.37	+0.3
2,421,000	-	yfcI	b2305	0.37	+0.2
2,421,008	-	yfcI	b2305	0.38	+0.5
2,421,052	+	yfcI	b2305	0.43	-0.7
2,421,052	-	yfcI	b2305	0.43	+0.9
2,421,054	+	yfcI	b2305	0.43	-0.8
2,421,054	+	yfcI	b2305	0.43	+0.2
2,421,055	-	yfcI	b2305	0.43	+1.6
2,421,057	+	yfcI	b2305	0.43	+0.4
2,421,060	-	yfcI	b2305	0.44	+0.7
2,421,060	-	yfcI	b2305	0.44	+0.4
2,421,063	-	yfcI	b2305	0.44	+1.7
2,421,063	-	yfcI	b2305	0.44	+1.8
2,421,075	+	yfcI	b2305	0.45	-0.9
2,421,075	+	yfcI	b2305	0.45	-0.3
2,421,089	-	yfcI	b2305	0.47	+2.2
2,421,089	-	yfcI	b2305	0.47	+0.3
2,421,129	+	yfcI	b2305	0.51	+0.7
2,421,134	-	yfcI	b2305	0.52	+0.3
2,421,146	-	yfcI	b2305	0.53	+2.5
2,421,178	-	yfcI	b2305	0.57	+1.1
2,421,179	+	yfcI	b2305	0.57	-1.7
2,421,179	+	yfcI	b2305	0.57	+0.6
2,421,210	+	yfcI	b2305	0.60	-0.7
2,421,225	+	yfcI	b2305	0.62	-0.4
2,421,225	+	yfcI	b2305	0.62	+0.7
2,421,226	+	yfcI	b2305	0.62	+0.8
2,421,227	+	yfcI	b2305	0.62	+0.3
2,421,227	+	yfcI	b2305	0.62	-2.4
2,421,237	+	yfcI	b2305	0.64	-0.1
2,421,335	-	yfcI	b2305	0.75	-0.9
2,421,345	-	yfcI	b2305	0.76	-0.7
2,421,370	-	yfcI	b2305	0.78	-1.9
2,421,370	-	yfcI	b2305	0.78	+0.2
2,421,385	-	yfcI	b2305	0.80	+0.6
2,421,425	-	yfcI	b2305	0.85	+0.4
2,421,425	-	yfcI	b2305	0.85	-0.3
2,421,425	-	yfcI	b2305	0.85	+0.0
2,421,431	-	yfcI	b2305	0.85	+0.3
2,421,437	+	yfcI	b2305	0.86	-0.1
2,421,439	+	yfcI	b2305	0.86	+1.8
2,421,445	+	yfcI	b2305	0.87	+0.7
2,421,457	-	yfcI	b2305	0.88	+2.7
2,421,457	-	yfcI	b2305	0.88	+1.5
2,421,494	+				+0.9
2,421,494	+				-1.7
2,421,502	-				+0.9
2,421,503	-				-0.6
2,421,504	-				+1.5
2,421,535	-				-1.7
2,421,535	-				+2.2
2,421,694	+				-0.1
2,421,771	+				+0.9
2,421,771	+				+1.2
2,421,782	-				-3.5
2,421,790	-				-0.6
2,421,793	-				-0.1
2,421,793	-				-0.1
2,421,793	-				-1.7
2,421,793	-				+0.9
2,421,806	-				-1.4
2,421,860	-	hisP	b2306	0.13	-0.6
2,421,874	-	hisP	b2306	0.15	-0.6
2,421,918	-	hisP	b2306	0.21	+0.4
2,421,921	+	hisP	b2306	0.21	+0.3
2,421,928	-	hisP	b2306	0.22	+1.4
2,421,928	-	hisP	b2306	0.22	+0.1
2,421,963	+	hisP	b2306	0.26	+0.2
2,421,963	+	hisP	b2306	0.26	-0.1
2,421,971	-	hisP	b2306	0.28	-1.7
2,421,973	+	hisP	b2306	0.28	+1.9
2,421,981	-	hisP	b2306	0.29	-0.1
2,421,981	-	hisP	b2306	0.29	-0.7
2,422,005	-	hisP	b2306	0.32	-2.4
2,422,199	+	hisP	b2306	0.57	-0.1
2,422,199	+	hisP	b2306	0.57	-0.1
2,422,218	-	hisP	b2306	0.59	+0.8
2,422,232	+	hisP	b2306	0.61	-1.1
2,422,232	+	hisP	b2306	0.61	-1.1
2,422,255	-	hisP	b2306	0.64	-0.1
2,422,255	-	hisP	b2306	0.64	-1.1
2,422,375	+	hisP	b2306	0.80	-0.1
2,422,486	-				-1.1
2,422,538	-				+1.1
2,422,538	-				-1.1