Strain Fitness in Escherichia coli BW25113 around b1793
Experiment: Cephalothin 0.01 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Cephalothin 0.01 mg/ml |
---|---|---|---|---|---|
remove | |||||
1,874,429 | - | yeaN | b1791 | 0.62 | +0.7 |
1,874,429 | - | yeaN | b1791 | 0.62 | -0.3 |
1,874,429 | - | yeaN | b1791 | 0.62 | -0.8 |
1,874,429 | - | yeaN | b1791 | 0.62 | +0.5 |
1,874,457 | - | yeaN | b1791 | 0.64 | -0.1 |
1,874,518 | - | yeaN | b1791 | 0.69 | -0.3 |
1,874,614 | + | yeaN | b1791 | 0.78 | +0.0 |
1,874,783 | + | +0.5 | |||
1,875,211 | + | yeaO | b1792 | 0.80 | +2.0 |
1,875,211 | + | yeaO | b1792 | 0.80 | +0.3 |
1,875,211 | + | yeaO | b1792 | 0.80 | +0.1 |
1,875,241 | - | yeaO | b1792 | 0.89 | +1.3 |
1,875,241 | - | yeaO | b1792 | 0.89 | -0.3 |
1,875,291 | + | +0.3 | |||
1,875,416 | - | yoaF | b1793 | 0.45 | -2.1 |
1,875,530 | + | yoaF | b1793 | 0.89 | -2.6 |
1,875,571 | + | +0.1 | |||
1,875,582 | + | -0.9 | |||
1,875,724 | + | -1.0 | |||
1,875,848 | - | yeaP | b1794 | 0.11 | -1.5 |
1,876,009 | + | yeaP | b1794 | 0.26 | -1.3 |
1,876,093 | + | yeaP | b1794 | 0.35 | -0.3 |
1,876,241 | - | yeaP | b1794 | 0.49 | +0.1 |
1,876,257 | + | yeaP | b1794 | 0.50 | +1.1 |
1,876,257 | + | yeaP | b1794 | 0.50 | +0.7 |
1,876,257 | + | yeaP | b1794 | 0.50 | +1.7 |
1,876,257 | + | yeaP | b1794 | 0.50 | -1.3 |
1,876,257 | + | yeaP | b1794 | 0.50 | +0.0 |
1,876,347 | + | yeaP | b1794 | 0.59 | -0.6 |
1,876,361 | - | yeaP | b1794 | 0.61 | -0.9 |
1,876,377 | + | yeaP | b1794 | 0.62 | -0.7 |
1,876,377 | + | yeaP | b1794 | 0.62 | -2.3 |
1,876,421 | - | yeaP | b1794 | 0.66 | -0.0 |
1,876,421 | - | yeaP | b1794 | 0.66 | -1.0 |
1,876,452 | + | yeaP | b1794 | 0.69 | +1.4 |
1,876,480 | + | yeaP | b1794 | 0.72 | +2.0 |
1,876,506 | + | yeaP | b1794 | 0.75 | +0.9 |
Or see this region's nucleotide sequence