Strain Fitness in Escherichia coli BW25113 around b1781
Experiment: Cephalothin 0.01 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | Cephalothin 0.01 mg/ml |
|---|---|---|---|---|---|
| remove | |||||
| 1,861,874 | - | -0.5 | |||
| 1,861,874 | - | -0.8 | |||
| 1,861,922 | + | -0.8 | |||
| 1,862,020 | - | yeaD | b1780 | 0.16 | -0.8 |
| 1,862,020 | - | yeaD | b1780 | 0.16 | +0.2 |
| 1,862,069 | - | yeaD | b1780 | 0.22 | +0.9 |
| 1,862,153 | + | yeaD | b1780 | 0.32 | +0.2 |
| 1,862,434 | + | yeaD | b1780 | 0.63 | -0.9 |
| 1,862,442 | - | yeaD | b1780 | 0.64 | +0.2 |
| 1,862,545 | + | yeaD | b1780 | 0.76 | +0.2 |
| 1,862,658 | - | yeaD | b1780 | 0.89 | -0.0 |
| 1,862,691 | - | -0.3 | |||
| 1,862,801 | + | -0.9 | |||
| 1,862,801 | + | +1.4 | |||
| 1,862,851 | - | -1.3 | |||
| 1,862,851 | - | +0.2 | |||
| 1,862,985 | - | yeaE | b1781 | 0.21 | -0.7 |
| 1,863,088 | - | yeaE | b1781 | 0.33 | -1.0 |
| 1,863,147 | + | yeaE | b1781 | 0.40 | -0.2 |
| 1,863,391 | - | yeaE | b1781 | 0.68 | -1.0 |
| 1,863,454 | + | yeaE | b1781 | 0.76 | -0.5 |
| 1,863,511 | + | yeaE | b1781 | 0.82 | -0.8 |
| 1,863,597 | - | -0.3 | |||
| 1,863,603 | - | +1.0 | |||
| 1,863,609 | - | -1.3 | |||
| 1,863,609 | - | -1.9 | |||
| 1,863,821 | - | -0.3 | |||
| 1,863,845 | - | mipA | b1782 | 0.13 | +0.7 |
| 1,864,037 | + | mipA | b1782 | 0.38 | +0.3 |
| 1,864,155 | + | mipA | b1782 | 0.54 | +1.7 |
| 1,864,155 | + | mipA | b1782 | 0.54 | -0.5 |
| 1,864,158 | - | mipA | b1782 | 0.55 | -0.7 |
| 1,864,158 | - | mipA | b1782 | 0.55 | +0.7 |
| 1,864,234 | - | mipA | b1782 | 0.65 | -0.3 |
| 1,864,234 | - | mipA | b1782 | 0.65 | +0.3 |
| 1,864,352 | - | mipA | b1782 | 0.81 | -0.1 |
| 1,864,398 | + | mipA | b1782 | 0.87 | +0.7 |
| 1,864,398 | + | mipA | b1782 | 0.87 | -0.6 |
| 1,864,659 | + | -0.7 | |||
| 1,864,659 | + | -0.0 |
Or see this region's nucleotide sequence