Strain Fitness in Escherichia coli BW25113 around b1614
Experiment: Cephalothin 0.01 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | Cephalothin 0.01 mg/ml |
|---|---|---|---|---|---|
| remove | |||||
| 1,686,883 | - | manA | b1613 | 0.24 | -1.5 |
| 1,687,299 | + | manA | b1613 | 0.59 | +0.8 |
| 1,687,351 | + | manA | b1613 | 0.64 | +0.2 |
| 1,687,526 | - | manA | b1613 | 0.79 | +0.3 |
| 1,687,932 | - | +0.7 | |||
| 1,688,065 | + | ydgA | b1614 | 0.13 | -0.1 |
| 1,688,226 | + | ydgA | b1614 | 0.23 | -1.5 |
| 1,688,573 | - | ydgA | b1614 | 0.46 | +1.8 |
| 1,688,718 | - | ydgA | b1614 | 0.56 | +1.7 |
| 1,688,786 | - | ydgA | b1614 | 0.60 | +1.9 |
| 1,688,901 | + | ydgA | b1614 | 0.68 | +2.3 |
| 1,688,940 | + | ydgA | b1614 | 0.71 | +1.4 |
| 1,689,240 | + | +1.4 | |||
| 1,689,593 | - | -1.8 | |||
| 1,689,678 | - | +1.3 | |||
| 1,689,678 | - | -1.5 | |||
| 1,689,759 | + | uidC | b1615 | 0.12 | -0.5 |
| 1,689,777 | - | uidC | b1615 | 0.13 | +1.1 |
| 1,689,777 | - | uidC | b1615 | 0.13 | -1.2 |
| 1,690,093 | - | uidC | b1615 | 0.38 | -2.1 |
| 1,690,093 | - | uidC | b1615 | 0.38 | -2.1 |
| 1,690,166 | + | uidC | b1615 | 0.44 | -0.8 |
| 1,690,208 | + | uidC | b1615 | 0.47 | -1.2 |
| 1,690,209 | + | uidC | b1615 | 0.47 | +0.5 |
| 1,690,291 | + | uidC | b1615 | 0.54 | +0.3 |
| 1,690,308 | + | uidC | b1615 | 0.55 | +1.1 |
| 1,690,368 | + | uidC | b1615 | 0.60 | +1.3 |
Or see this region's nucleotide sequence