Strain Fitness in Escherichia coli BW25113 around b0961

Experiment: Cephalothin 0.01 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cephalothin 0.01 mg/ml
1,022,308	+	b0960	b0960	0.63	+1.3
1,022,316	-	b0960	b0960	0.63	+0.5
1,022,316	-	b0960	b0960	0.63	+0.5
1,022,336	-	b0960	b0960	0.64	+0.3
1,022,444	-	b0960	b0960	0.69	-0.8
1,022,444	-	b0960	b0960	0.69	-1.9
1,022,446	-	b0960	b0960	0.69	+1.2
1,022,512	+	b0960	b0960	0.72	+0.2
1,022,512	-	b0960	b0960	0.72	+0.1
1,022,565	+	b0960	b0960	0.75	+0.7
1,022,602	-	b0960	b0960	0.77	+1.9
1,022,603	+	b0960	b0960	0.77	+0.9
1,022,603	+	b0960	b0960	0.77	-0.1
1,022,644	+	b0960	b0960	0.79	-2.4
1,022,703	+	b0960	b0960	0.81	-0.1
1,022,713	-	b0960	b0960	0.82	-0.4
1,022,810	+	b0960	b0960	0.86	-0.1
1,022,819	+	b0960	b0960	0.87	-2.9
1,022,852	-	b0960	b0960	0.88	+0.2
1,022,884	-	b0960	b0960	0.90	+1.2
1,022,884	-	b0960	b0960	0.90	-1.9
1,022,886	+	b0960	b0960	0.90	+0.2
1,023,008	+				+0.6
1,023,160	+				-0.5
1,023,160	+				-0.1
1,023,170	-	yccF	b0961	0.10	-1.1
1,023,179	-	yccF	b0961	0.12	-0.3
1,023,400	+	yccF	b0961	0.62	-0.7
1,023,423	+	yccF	b0961	0.67	-1.1
1,023,423	+	yccF	b0961	0.67	+0.6
1,023,488	+	yccF	b0961	0.81	-0.1
1,023,512	+	yccF	b0961	0.87	+0.1
1,023,525	-	yccF	b0961	0.89	+0.6
1,023,525	-	yccF	b0961	0.89	+0.5
1,023,588	-				-2.9
1,023,689	-				-1.1
1,023,689	-				-1.1
1,023,698	-				+0.5
1,023,770	+				+2.9
1,023,770	+				-1.1
1,023,867	-				+0.9
1,023,867	-				-1.4
1,023,876	+				+2.5
1,023,937	-	helD	b0962	0.12	-0.5
1,024,110	+	helD	b0962	0.20	-0.8
1,024,181	-	helD	b0962	0.24	+0.8
1,024,387	-	helD	b0962	0.34	-0.3
1,024,483	-	helD	b0962	0.38	-1.7
1,024,483	-	helD	b0962	0.38	-1.7
1,024,499	+	helD	b0962	0.39	-0.4