Strain Fitness in Escherichia coli BW25113 around b0944

Experiment: Cephalothin 0.01 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cephalothin 0.01 mg/ml
1,002,224	-	ycbU	b0942	0.21	-0.6
1,002,323	-	ycbU	b0942	0.39	-0.8
1,002,325	+	ycbU	b0942	0.39	+0.6
1,002,325	+	ycbU	b0942	0.39	-1.3
1,002,418	+	ycbU	b0942	0.56	-1.4
1,002,421	-	ycbU	b0942	0.57	+0.5
1,002,421	-	ycbU	b0942	0.57	-0.1
1,002,522	+	ycbU	b0942	0.76	-0.7
1,002,680	-				+0.8
1,002,688	+				-2.1
1,002,688	+				+0.9
1,002,766	+	b0943	b0943	0.20	-0.1
1,002,795	-	b0943	b0943	0.26	-0.1
1,002,803	+	b0943	b0943	0.27	+1.5
1,002,907	-	b0943	b0943	0.47	-2.9
1,002,921	+	b0943	b0943	0.50	+0.8
1,002,952	-	b0943	b0943	0.56	+0.3
1,002,952	-	b0943	b0943	0.56	-0.2
1,003,071	-	b0943	b0943	0.79	-0.8
1,003,071	-	b0943	b0943	0.79	-1.1
1,003,072	-	b0943	b0943	0.79	-0.3
1,003,109	+	b0943	b0943	0.87	-1.3
1,003,112	+	b0943	b0943	0.87	-0.5
1,003,338	+	ycbF	b0944	0.24	-0.4
1,003,385	+	ycbF	b0944	0.30	-1.1
1,003,393	-	ycbF	b0944	0.31	-1.7
1,003,460	-	ycbF	b0944	0.41	+1.5
1,003,616	+	ycbF	b0944	0.63	-0.1
1,003,627	+	ycbF	b0944	0.64	+0.4
1,003,688	-	ycbF	b0944	0.73	-0.5
1,003,705	-	ycbF	b0944	0.75	-0.5
1,003,705	-	ycbF	b0944	0.75	-0.9
1,003,723	+	ycbF	b0944	0.78	-1.7
1,003,723	+	ycbF	b0944	0.78	-0.5
1,003,775	+	ycbF	b0944	0.85	-1.9
1,003,775	+	ycbF	b0944	0.85	-0.1
1,003,959	-				+0.2
1,004,039	-				-0.7
1,004,050	-				-1.4
1,004,119	+	pyrD	b0945	0.13	+0.2
1,004,126	+	pyrD	b0945	0.13	-0.1
1,004,126	+	pyrD	b0945	0.13	+1.5
1,004,126	+	pyrD	b0945	0.13	-0.1
1,004,134	+	pyrD	b0945	0.14	-1.1
1,004,141	+	pyrD	b0945	0.15	-0.5
1,004,174	-	pyrD	b0945	0.18	-1.1
1,004,234	+	pyrD	b0945	0.24	-0.5
1,004,239	+	pyrD	b0945	0.25	-0.5
1,004,256	-	pyrD	b0945	0.26	+0.9
1,004,256	-	pyrD	b0945	0.26	+0.6
1,004,277	-	pyrD	b0945	0.28	-0.5
1,004,307	-	pyrD	b0945	0.31	-1.1
1,004,350	+	pyrD	b0945	0.36	-1.9
1,004,403	-	pyrD	b0945	0.41	+0.2
1,004,440	+	pyrD	b0945	0.44	+1.5
1,004,513	+	pyrD	b0945	0.52	+1.7
1,004,513	+	pyrD	b0945	0.52	-0.1
1,004,523	+	pyrD	b0945	0.53	-0.4
1,004,531	-	pyrD	b0945	0.53	-1.1
1,004,545	-	pyrD	b0945	0.55	-0.6
1,004,553	-	pyrD	b0945	0.56	-1.3
1,004,568	+	pyrD	b0945	0.57	+0.9
1,004,568	+	pyrD	b0945	0.57	+0.9
1,004,614	+	pyrD	b0945	0.62	-0.5
1,004,636	+	pyrD	b0945	0.64	+0.3
1,004,689	-	pyrD	b0945	0.69	+0.7
1,004,698	+	pyrD	b0945	0.70	-0.1
1,004,698	+	pyrD	b0945	0.70	+0.4
1,004,708	-	pyrD	b0945	0.71	+0.6
1,004,717	+	pyrD	b0945	0.72	-0.1
1,004,720	-	pyrD	b0945	0.72	-1.1
1,004,722	+	pyrD	b0945	0.72	-0.1
1,004,727	+	pyrD	b0945	0.73	+0.9
1,004,727	+	pyrD	b0945	0.73	-0.7
1,004,733	-	pyrD	b0945	0.73	-0.1
1,004,733	-	pyrD	b0945	0.73	-0.1
1,004,736	-	pyrD	b0945	0.74	-1.1
1,004,780	-	pyrD	b0945	0.78	-0.7
1,004,783	+	pyrD	b0945	0.78	-0.1
1,004,785	+	pyrD	b0945	0.79	+0.2
1,004,791	-	pyrD	b0945	0.79	+0.6
1,004,791	-	pyrD	b0945	0.79	+1.2
1,004,801	-	pyrD	b0945	0.80	-1.8
1,004,871	+	pyrD	b0945	0.87	-1.1
1,004,871	+	pyrD	b0945	0.87	+0.5
1,004,871	+	pyrD	b0945	0.87	-1.3