Strain Fitness in Escherichia coli BW25113 around b0930
Experiment: Cephalothin 0.01 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Cephalothin 0.01 mg/ml |
---|---|---|---|---|---|
remove | |||||
985,813 | - | ompF | b0929 | 0.64 | +5.9 |
985,880 | - | ompF | b0929 | 0.70 | +5.6 |
985,934 | + | ompF | b0929 | 0.75 | +6.4 |
985,934 | + | ompF | b0929 | 0.75 | +6.6 |
986,017 | + | ompF | b0929 | 0.83 | +4.5 |
986,017 | + | ompF | b0929 | 0.83 | +6.6 |
986,164 | - | +7.3 | |||
986,164 | - | +5.8 | |||
986,179 | - | +5.1 | |||
986,217 | - | +4.9 | |||
986,217 | - | +5.3 | |||
986,445 | - | -2.1 | |||
988,280 | - | +1.3 | |||
988,301 | + | -1.1 | |||
988,411 | + | -0.1 | |||
988,419 | - | +1.9 | |||
988,419 | - | -0.5 | |||
988,494 | + | -1.7 | |||
988,500 | - | pncB | b0931 | 0.10 | +0.9 |
988,654 | + | -0.1 | |||
988,670 | - | pncB | b0931 | 0.24 | -0.1 |
988,752 | - | pncB | b0931 | 0.31 | +0.2 |
988,752 | - | pncB | b0931 | 0.31 | -0.1 |
988,819 | + | pncB | b0931 | 0.37 | +0.4 |
988,819 | + | pncB | b0931 | 0.37 | +0.3 |
988,883 | + | pncB | b0931 | 0.42 | -1.1 |
989,105 | - | pncB | b0931 | 0.61 | +0.9 |
989,105 | - | pncB | b0931 | 0.61 | +0.9 |
989,167 | + | pncB | b0931 | 0.66 | -0.7 |
Or see this region's nucleotide sequence