Strain Fitness in Escherichia coli BW25113 around b0537

Experiment: Cephalothin 0.01 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Cephalothin 0.01 mg/ml
563,058	+				-0.1
563,257	-	fimZ	b0535	0.29	+2.3
563,355	-	fimZ	b0535	0.45	+0.7
563,413	-	fimZ	b0535	0.54	-0.9
563,423	-	fimZ	b0535	0.56	+0.1
563,427	-	fimZ	b0535	0.56	+1.2
563,438	-	fimZ	b0535	0.58	+0.1
563,482	-	fimZ	b0535	0.65	+2.0
563,482	-	fimZ	b0535	0.65	-0.3
563,482	-	fimZ	b0535	0.65	+0.6
563,489	-	fimZ	b0535	0.66	+0.7
563,513	-	fimZ	b0535	0.70	+0.2
563,522	-	fimZ	b0535	0.71	-0.3
563,527	-	fimZ	b0535	0.72	-0.7
563,542	-	fimZ	b0535	0.74	+0.5
563,542	-	fimZ	b0535	0.74	+0.5
563,561	-	fimZ	b0535	0.77	+1.3
563,610	-	fimZ	b0535	0.85	+0.4
563,620	-	fimZ	b0535	0.87	+1.7
563,675	-				+1.3
563,683	-				+0.1
563,684	-				+1.3
563,684	-				-0.1
563,684	-				+3.1
563,684	-				-0.9
563,684	-				-0.9
563,684	-				+0.1
563,686	-				+0.8
563,705	-				+0.3
563,794	-				+0.1
563,802	-				+3.7
563,809	-				+0.3
563,828	-				+2.4
563,860	-				+3.8
563,925	+				+1.4
563,925	+				+3.4
564,129	+				+1.0
564,147	+				-0.5
564,147	+				+1.5
564,147	+				+1.1
564,147	+				-0.9
564,169	+	intD	b0537	0.11	-1.5
564,169	+	intD	b0537	0.11	-0.5
564,177	-	intD	b0537	0.12	+0.1
564,201	-	intD	b0537	0.14	+1.0
564,201	-	intD	b0537	0.14	+1.5
564,220	-	intD	b0537	0.16	+2.1
564,220	-	intD	b0537	0.16	+1.8
564,240	+	intD	b0537	0.17	+0.7
564,240	+	intD	b0537	0.17	+0.1
564,253	-	intD	b0537	0.18	+1.3
564,357	-	intD	b0537	0.27	-0.6
564,357	-	intD	b0537	0.27	+2.5
564,449	-	intD	b0537	0.35	+1.1
564,492	-	intD	b0537	0.39	+1.1
564,492	-	intD	b0537	0.39	+0.8
564,492	-	intD	b0537	0.39	+0.2
564,492	-	intD	b0537	0.39	+3.1
564,492	-	intD	b0537	0.39	+0.9
564,498	-	intD	b0537	0.40	+2.8
564,680	+	intD	b0537	0.55	+0.9
564,681	-	intD	b0537	0.55	+1.8
564,718	+	intD	b0537	0.58	-0.6
564,718	+	intD	b0537	0.58	-0.9
564,746	-	intD	b0537	0.61	+0.1
564,762	+	intD	b0537	0.62	+0.8
564,762	+	intD	b0537	0.62	-1.8
564,823	-	intD	b0537	0.67	+1.7
564,866	+	intD	b0537	0.71	+0.4
564,888	+	intD	b0537	0.73	+1.2
564,921	-	intD	b0537	0.76	-0.3
564,927	-	intD	b0537	0.76	+1.7
564,927	-	intD	b0537	0.76	-2.5
564,927	-	intD	b0537	0.76	+3.3
564,950	-	intD	b0537	0.78	-0.2
565,014	-	intD	b0537	0.84	-0.1
565,014	-	intD	b0537	0.84	+1.4
565,014	-	intD	b0537	0.84	-0.5
565,045	-	intD	b0537	0.87	-0.3
565,074	+	intD	b0537	0.89	+0.5
565,075	-	intD	b0537	0.89	+0.8
565,157	-				+2.1
565,157	-				+0.1
565,167	-				+3.2
565,232	-	xisD	b4633	0.68	+1.6
565,241	+	xisD	b4633	0.72	-1.5
565,244	+	xisD	b4633	0.73	-0.5
565,246	+	xisD	b4633	0.74	-0.5
565,254	-	xisD	b4633	0.78	-1.9
565,254	-	xisD	b4633	0.78	-0.9
565,264	-	xisD	b4633	0.82	+1.1
565,271	+	xisD	b4633	0.86	+0.1
565,271	+	xisD	b4633	0.86	+0.5
565,440	+	ybcC	b0539	0.43	-1.5
565,473	+	ybcC	b0539	0.54	-0.9
565,473	+	ybcC	b0539	0.54	+0.3
565,481	-	ybcC	b0539	0.57	+1.3
565,482	+	ybcC	b0539	0.58	-1.1
565,482	+	ybcC	b0539	0.58	-0.4
565,512	+	ybcC	b0539	0.68	-0.6
565,517	+	ybcC	b0539	0.70	+0.7
565,625	+				+0.6
565,757	-	peaD	b4508	0.51	+0.5
565,841	-	peaD	b4508	0.78	+0.5
565,910	-				+0.1
565,967	-	renD	b0542	0.65	+1.1
565,967	-	renD	b0542	0.65	-0.5
565,969	-	renD	b0542	0.67	+0.3
565,969	-	renD	b0542	0.67	+1.2