Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_4419

Experiment: m.b. Vancomycin 0.06 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Vancomycin 0.06 mg/ml
5,283,201	+				+0.7
5,283,202	-				-0.8
5,283,260	-				-1.4
5,283,260	-				+1.0
5,283,262	+				+0.3
5,283,262	+				-0.5
5,283,349	-				+0.7
5,283,394	+				+1.8
5,283,395	-				+1.6
5,283,497	+		Echvi_4418	0.25	+1.3
5,283,497	+		Echvi_4418	0.25	+1.4
5,283,497	+		Echvi_4418	0.25	+1.1
5,283,498	-		Echvi_4418	0.25	+1.9
5,283,503	+		Echvi_4418	0.26	+2.2
5,283,534	+		Echvi_4418	0.31	+1.7
5,283,534	+		Echvi_4418	0.31	+1.0
5,283,535	-		Echvi_4418	0.31	+2.1
5,283,584	+		Echvi_4418	0.40	+2.2
5,283,732	-		Echvi_4418	0.65	+2.1
5,283,771	+		Echvi_4418	0.72	+1.4
5,283,940	+				+0.8
5,284,005	+				-0.6
5,284,015	+				+0.2
5,284,110	+				-1.5
5,284,150	+				-0.8
5,284,151	-				-1.8
5,284,166	+				-1.0
5,284,175	+				-1.4
5,284,175	+				-0.8
5,284,175	+				-0.5
5,284,175	+				-0.5
5,284,176	-				-1.4
5,284,176	-				-1.8
5,284,176	-				-1.8
5,284,176	-				-1.0
5,284,177	+				-0.8
5,284,177	+				-1.3
5,284,177	+				-2.1
5,284,178	-				-1.6
5,284,178	-				-2.3
5,284,178	-				-0.8
5,284,178	-				-1.7
5,284,275	-				-0.9
5,284,453	+		Echvi_4419	0.26	-0.8
5,284,453	+		Echvi_4419	0.26	-0.4
5,284,453	+		Echvi_4419	0.26	-1.3
5,284,454	-		Echvi_4419	0.26	-2.8
5,284,454	-		Echvi_4419	0.26	-1.2
5,284,454	-		Echvi_4419	0.26	-1.7
5,284,454	-		Echvi_4419	0.26	+1.6
5,284,454	-		Echvi_4419	0.26	+0.9
5,284,454	-		Echvi_4419	0.26	-0.3
5,284,455	+		Echvi_4419	0.26	-0.4
5,284,456	-		Echvi_4419	0.26	-1.2
5,284,464	+		Echvi_4419	0.27	-0.7
5,284,474	+		Echvi_4419	0.28	-0.6
5,284,483	+		Echvi_4419	0.29	-1.1
5,284,483	+		Echvi_4419	0.29	+0.0
5,284,519	+		Echvi_4419	0.32	-1.0
5,284,519	+		Echvi_4419	0.32	-1.0
5,284,519	+		Echvi_4419	0.32	-0.8
5,284,611	+		Echvi_4419	0.41	-1.2
5,284,631	-		Echvi_4419	0.42	-0.7
5,284,702	+		Echvi_4419	0.49	-2.5
5,284,703	-		Echvi_4419	0.49	-3.2
5,285,005	+		Echvi_4419	0.78	-1.6
5,285,005	+		Echvi_4419	0.78	-2.8
5,285,006	-		Echvi_4419	0.78	-0.1
5,285,006	-		Echvi_4419	0.78	-1.2
5,285,006	-		Echvi_4419	0.78	-0.5
5,285,006	-		Echvi_4419	0.78	-0.3
5,285,006	-		Echvi_4419	0.78	-2.0
5,285,006	-		Echvi_4419	0.78	-1.6
5,285,006	-		Echvi_4419	0.78	-1.9
5,285,007	+		Echvi_4419	0.78	-0.4
5,285,007	+		Echvi_4419	0.78	-1.0
5,285,008	-		Echvi_4419	0.78	+0.9
5,285,008	-		Echvi_4419	0.78	+0.6
5,285,008	-		Echvi_4419	0.78	-1.0
5,285,008	-		Echvi_4419	0.78	-2.0
5,285,113	-		Echvi_4419	0.88	-1.0
5,285,119	+		Echvi_4419	0.88	+1.2
5,285,120	-		Echvi_4419	0.89	+0.4
5,285,183	-				-0.6
5,285,281	-				+0.6
5,285,298	-				-0.1
5,285,298	-				+0.8
5,285,320	+				-1.2
5,285,321	-				+0.6
5,285,321	-				-0.6
5,285,353	-				+1.9
5,285,474	+		Echvi_4420	0.22	+0.6
5,285,474	+		Echvi_4420	0.22	-0.2
5,285,475	-		Echvi_4420	0.22	+1.0
5,285,475	-		Echvi_4420	0.22	-0.2
5,285,583	+		Echvi_4420	0.38	-0.3
5,285,583	+		Echvi_4420	0.38	+0.6
5,285,583	+		Echvi_4420	0.38	-1.0
5,285,583	+		Echvi_4420	0.38	-2.3
5,285,588	+		Echvi_4420	0.39	-0.1
5,285,589	-		Echvi_4420	0.39	-1.0
5,285,700	+		Echvi_4420	0.56	-1.0
5,285,728	+		Echvi_4420	0.60	+1.1
5,285,753	-		Echvi_4420	0.64	+0.9
5,285,753	-		Echvi_4420	0.64	-0.3
5,285,857	-		Echvi_4420	0.79	+0.0
5,285,971	-				-0.7
5,285,971	-				+0.1
5,286,031	+				+0.1
5,286,073	+		Echvi_4421	0.21	-1.2
5,286,117	+		Echvi_4421	0.35	-0.4
5,286,121	+		Echvi_4421	0.36	-0.5
5,286,121	+		Echvi_4421	0.36	-0.2
5,286,121	+		Echvi_4421	0.36	-0.3
5,286,122	-		Echvi_4421	0.36	-0.6
5,286,122	-		Echvi_4421	0.36	+1.9
5,286,207	+		Echvi_4421	0.63	+0.7
5,286,208	-		Echvi_4421	0.63	+0.5
5,286,208	-		Echvi_4421	0.63	-0.1