Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_3786

Experiment: m.b. Vancomycin 0.06 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Vancomycin 0.06 mg/ml
4,515,888	-		Echvi_3785	0.45	+0.3
4,515,888	-		Echvi_3785	0.45	-0.5
4,516,125	-		Echvi_3785	0.61	-0.9
4,516,226	-		Echvi_3785	0.68	-0.7
4,516,261	-		Echvi_3785	0.70	+2.5
4,516,265	-		Echvi_3785	0.70	+0.7
4,516,339	+		Echvi_3785	0.75	-0.2
4,516,339	+		Echvi_3785	0.75	-0.4
4,516,339	+		Echvi_3785	0.75	+0.6
4,516,339	+		Echvi_3785	0.75	-0.8
4,516,340	-		Echvi_3785	0.75	-2.3
4,516,379	-		Echvi_3785	0.78	-0.7
4,516,555	-		Echvi_3785	0.89	+1.1
4,516,555	-		Echvi_3785	0.89	-1.4
4,516,619	+				+1.0
4,516,683	-				-0.5
4,516,683	-				-0.6
4,516,719	-				+0.3
4,516,724	+				-0.2
4,516,800	+				+0.3
4,516,801	-				-0.1
4,516,833	+				-0.6
4,516,853	+				-0.2
4,516,853	+				+0.0
4,516,854	-				+0.7
4,516,873	-				+0.6
4,516,875	-				+0.8
4,516,915	+				+0.5
4,517,004	+		Echvi_3786	0.11	-0.0
4,517,009	-		Echvi_3786	0.11	-0.5
4,517,031	+		Echvi_3786	0.13	-0.1
4,517,031	+		Echvi_3786	0.13	+0.8
4,517,043	-		Echvi_3786	0.13	-2.0
4,517,077	-		Echvi_3786	0.16	-0.3
4,517,081	-		Echvi_3786	0.16	+0.6
4,517,117	+		Echvi_3786	0.19	+0.5
4,517,117	+		Echvi_3786	0.19	-1.3
4,517,117	+		Echvi_3786	0.19	+0.8
4,517,135	-		Echvi_3786	0.20	-1.3
4,517,135	-		Echvi_3786	0.20	-0.7
4,517,139	+		Echvi_3786	0.20	-1.0
4,517,155	+		Echvi_3786	0.21	-1.4
4,517,192	+		Echvi_3786	0.24	-2.0
4,517,192	+		Echvi_3786	0.24	-0.3
4,517,192	+		Echvi_3786	0.24	+0.8
4,517,192	+		Echvi_3786	0.24	+0.3
4,517,192	+		Echvi_3786	0.24	-1.9
4,517,192	+		Echvi_3786	0.24	-0.1
4,517,279	+		Echvi_3786	0.30	-1.6
4,517,375	+		Echvi_3786	0.37	+0.6
4,517,376	-		Echvi_3786	0.37	-2.5
4,517,390	+		Echvi_3786	0.38	-0.5
4,517,391	-		Echvi_3786	0.38	-1.0
4,517,391	-		Echvi_3786	0.38	+0.1
4,517,391	-		Echvi_3786	0.38	-1.3
4,517,391	-		Echvi_3786	0.38	-0.2
4,517,527	+		Echvi_3786	0.48	+0.7
4,517,528	-		Echvi_3786	0.48	-1.5
4,517,547	+		Echvi_3786	0.49	+0.2
4,517,584	-		Echvi_3786	0.52	+0.3
4,517,608	+		Echvi_3786	0.54	+1.2
4,517,608	+		Echvi_3786	0.54	+1.0
4,517,608	+		Echvi_3786	0.54	-0.3
4,517,609	-		Echvi_3786	0.54	+4.7
4,517,609	-		Echvi_3786	0.54	-0.1
4,517,609	-		Echvi_3786	0.54	-0.3
4,517,651	+		Echvi_3786	0.57	+2.8
4,517,653	+		Echvi_3786	0.57	-0.1
4,517,659	+		Echvi_3786	0.58	+1.7
4,517,659	+		Echvi_3786	0.58	+1.2
4,517,735	-		Echvi_3786	0.63	-1.0
4,517,743	+		Echvi_3786	0.64	-0.9
4,517,782	+		Echvi_3786	0.66	+0.1
4,517,961	-		Echvi_3786	0.79	-0.7
4,517,961	-		Echvi_3786	0.79	-0.9
4,517,961	-		Echvi_3786	0.79	+1.0
4,518,067	+		Echvi_3786	0.87	+0.8
4,518,067	+		Echvi_3786	0.87	-0.2
4,518,068	-		Echvi_3786	0.87	+2.5
4,518,089	+		Echvi_3786	0.88	-1.5
4,518,089	+		Echvi_3786	0.88	-0.5
4,518,090	-		Echvi_3786	0.88	+0.5
4,518,090	-		Echvi_3786	0.88	-1.5
4,518,090	-		Echvi_3786	0.88	-2.8
4,518,212	-				-0.5
4,518,229	-				-0.1
4,518,229	-				-0.2
4,518,229	-				-0.2
4,518,262	+				+0.8
4,518,315	+				+0.5
4,518,332	+				+1.2
4,518,353	+				+0.1
4,518,393	+				+0.3
4,518,393	+				-0.5
4,518,393	+				-0.1
4,518,393	+				+0.4
4,518,519	+				+0.5
4,518,550	+				-1.8
4,518,666	+		Echvi_3787	0.14	+0.8
4,518,744	+		Echvi_3787	0.18	-0.5
4,518,749	+		Echvi_3787	0.19	-2.1
4,518,848	+		Echvi_3787	0.24	-0.5
4,518,858	+		Echvi_3787	0.24	+0.1
4,518,902	+		Echvi_3787	0.27	+1.3
4,518,902	+		Echvi_3787	0.27	-1.8
4,518,911	+		Echvi_3787	0.27	-0.3
4,518,911	+		Echvi_3787	0.27	-0.7
4,518,911	+		Echvi_3787	0.27	+0.3
4,518,919	+		Echvi_3787	0.28	+0.5
4,518,919	+		Echvi_3787	0.28	-0.7
4,518,923	+		Echvi_3787	0.28	+0.8
4,518,923	+		Echvi_3787	0.28	-0.2
4,519,003	+		Echvi_3787	0.32	+0.2
4,519,035	+		Echvi_3787	0.34	+1.1
4,519,146	-		Echvi_3787	0.40	-1.3
4,519,239	+		Echvi_3787	0.45	+0.1
4,519,239	+		Echvi_3787	0.45	-2.2
4,519,240	-		Echvi_3787	0.45	-0.3
4,519,241	+		Echvi_3787	0.45	+0.3