Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_3005

Experiment: m.b. Vancomycin 0.06 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Vancomycin 0.06 mg/ml
3,589,345	+				+0.0
3,589,346	-				-0.6
3,589,346	-				+0.3
3,589,447	-		Echvi_3004	0.15	-1.7
3,589,449	+		Echvi_3004	0.15	-0.5
3,589,498	+		Echvi_3004	0.21	-1.0
3,589,498	+		Echvi_3004	0.21	+1.2
3,589,717	+		Echvi_3004	0.44	-0.6
3,589,789	+		Echvi_3004	0.52	+0.9
3,589,789	+		Echvi_3004	0.52	+1.5
3,589,789	+		Echvi_3004	0.52	+1.2
3,589,789	+		Echvi_3004	0.52	-2.5
3,589,790	-		Echvi_3004	0.52	-1.5
3,589,792	-		Echvi_3004	0.53	-0.0
3,589,792	-		Echvi_3004	0.53	-1.5
3,589,811	-		Echvi_3004	0.55	+0.4
3,589,843	+		Echvi_3004	0.58	-1.0
3,589,862	-		Echvi_3004	0.60	+0.7
3,589,909	+		Echvi_3004	0.65	+0.4
3,589,981	-		Echvi_3004	0.73	-1.0
3,590,027	-				-0.1
3,590,047	+		Echvi_3004	0.81	+1.1
3,590,049	+		Echvi_3004	0.81	+0.3
3,590,050	-		Echvi_3004	0.81	+0.8
3,590,085	-		Echvi_3004	0.85	-0.3
3,590,085	-		Echvi_3004	0.85	+0.6
3,590,225	-				+0.1
3,590,228	+				+0.1
3,590,228	+				-0.7
3,590,229	-				-2.8
3,590,229	-				+0.2
3,590,229	-				-0.2
3,590,229	-				+0.8
3,590,229	-				-1.9
3,590,229	-				-0.2
3,590,229	-				-0.7
3,590,231	-				-0.1
3,590,246	+				-0.1
3,590,249	-				-0.8
3,590,280	+				+0.5
3,590,280	+				-0.8
3,590,280	+				-0.5
3,590,311	-				+1.1
3,590,330	+				+0.0
3,590,394	-				+0.9
3,590,541	+		Echvi_3005	0.13	-1.5
3,590,541	+		Echvi_3005	0.13	-2.8
3,590,634	-		Echvi_3005	0.19	-1.0
3,590,751	+		Echvi_3005	0.27	-2.8
3,590,785	+		Echvi_3005	0.29	-1.8
3,590,785	+		Echvi_3005	0.29	-3.4
3,590,786	-		Echvi_3005	0.29	-0.8
3,590,786	-		Echvi_3005	0.29	-0.3
3,590,790	+		Echvi_3005	0.29	-1.8
3,590,791	-		Echvi_3005	0.29	-1.7
3,590,835	+		Echvi_3005	0.32	-2.3
3,590,836	-		Echvi_3005	0.32	-2.4
3,590,847	-		Echvi_3005	0.33	-1.5
3,590,947	-		Echvi_3005	0.40	-1.1
3,591,004	-		Echvi_3005	0.43	-3.2
3,591,004	-		Echvi_3005	0.43	-0.9
3,591,027	+		Echvi_3005	0.45	-1.7
3,591,030	-		Echvi_3005	0.45	-0.8
3,591,195	-		Echvi_3005	0.56	-2.2
3,591,362	-		Echvi_3005	0.67	-0.1
3,591,427	+		Echvi_3005	0.71	-2.7
3,591,433	-		Echvi_3005	0.72	-1.8
3,591,434	+		Echvi_3005	0.72	-1.6
3,591,471	+		Echvi_3005	0.74	-2.4
3,591,472	-		Echvi_3005	0.74	-0.8
3,591,877	-				-0.1
3,591,877	-				+0.3
3,591,879	-				-1.2
3,591,903	+				-0.4
3,591,907	+				-0.3
3,591,934	+				-0.7
3,592,055	+				-0.5
3,592,084	-				-0.0
3,592,086	+				+0.9
3,592,144	-				+1.3
3,592,188	-		Echvi_3006	0.12	+0.2
3,592,210	+		Echvi_3006	0.15	+2.4
3,592,210	+		Echvi_3006	0.15	+0.6
3,592,210	+		Echvi_3006	0.15	+0.8
3,592,210	+		Echvi_3006	0.15	-0.2
3,592,210	+		Echvi_3006	0.15	-2.2
3,592,211	-		Echvi_3006	0.15	+1.2
3,592,211	-		Echvi_3006	0.15	+0.7
3,592,211	-		Echvi_3006	0.15	-0.1
3,592,211	-		Echvi_3006	0.15	+0.2
3,592,215	-		Echvi_3006	0.15	+0.5
3,592,264	-		Echvi_3006	0.21	-0.6
3,592,282	+		Echvi_3006	0.23	-1.3
3,592,332	+		Echvi_3006	0.29	-0.3
3,592,333	-		Echvi_3006	0.29	+0.8
3,592,335	+		Echvi_3006	0.29	-2.7
3,592,336	-		Echvi_3006	0.29	+0.6
3,592,336	-		Echvi_3006	0.29	-0.8
3,592,359	+		Echvi_3006	0.32	+0.2
3,592,414	-		Echvi_3006	0.38	+0.5
3,592,422	-		Echvi_3006	0.39	+1.5
3,592,422	-		Echvi_3006	0.39	-0.8
3,592,464	+		Echvi_3006	0.44	-1.3
3,592,464	+		Echvi_3006	0.44	-1.5
3,592,547	+		Echvi_3006	0.54	+0.1
3,592,547	+		Echvi_3006	0.54	-0.1
3,592,559	-		Echvi_3006	0.55	+1.5
3,592,584	+		Echvi_3006	0.58	-0.8
3,592,585	-		Echvi_3006	0.58	-1.0
3,592,695	-		Echvi_3006	0.71	-0.8
3,592,751	+		Echvi_3006	0.77	+1.5
3,592,751	+		Echvi_3006	0.77	+0.0
3,592,752	-		Echvi_3006	0.78	-0.9
3,592,752	-		Echvi_3006	0.78	+0.7
3,592,761	-		Echvi_3006	0.79	-0.7
3,592,806	+		Echvi_3006	0.84	-0.8
3,592,806	+		Echvi_3006	0.84	+1.5
3,592,807	-		Echvi_3006	0.84	-1.8
3,592,807	-		Echvi_3006	0.84	+0.6
3,592,807	-		Echvi_3006	0.84	-0.1
3,592,815	+		Echvi_3006	0.85	-0.6