Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_0938

Experiment: m.b. Vancomycin 0.06 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Vancomycin 0.06 mg/ml
1,082,558	+		Echvi_0937	0.57	-0.4
1,082,559	-		Echvi_0937	0.57	+0.1
1,082,578	+		Echvi_0937	0.59	-0.9
1,082,597	-		Echvi_0937	0.61	-0.6
1,082,629	+		Echvi_0937	0.64	+0.9
1,082,629	+		Echvi_0937	0.64	+0.3
1,082,629	+		Echvi_0937	0.64	-0.0
1,082,630	-		Echvi_0937	0.64	+0.1
1,082,739	+		Echvi_0937	0.76	+0.5
1,082,740	-		Echvi_0937	0.76	-0.2
1,082,742	+		Echvi_0937	0.76	-0.3
1,082,743	-		Echvi_0937	0.76	+1.3
1,082,776	+		Echvi_0937	0.80	+0.4
1,082,776	+		Echvi_0937	0.80	-1.4
1,082,800	+		Echvi_0937	0.83	-1.2
1,082,830	+		Echvi_0937	0.86	+0.9
1,082,830	+		Echvi_0937	0.86	+2.1
1,082,831	-		Echvi_0937	0.86	+0.3
1,082,833	+		Echvi_0937	0.86	+0.0
1,082,833	+		Echvi_0937	0.86	-1.0
1,082,834	-		Echvi_0937	0.86	-0.3
1,082,834	-		Echvi_0937	0.86	+0.2
1,082,860	-		Echvi_0937	0.89	+0.1
1,082,862	+		Echvi_0937	0.89	-0.7
1,082,862	+		Echvi_0937	0.89	-0.8
1,082,863	-		Echvi_0937	0.89	+0.1
1,082,863	-		Echvi_0937	0.89	-1.2
1,082,863	-		Echvi_0937	0.89	-0.3
1,082,891	+				+0.1
1,082,892	-				+0.3
1,083,006	+				+0.1
1,083,047	+				+1.0
1,083,085	-				+0.0
1,083,101	+				-1.3
1,083,102	-				+0.3
1,083,102	-				-1.3
1,083,147	-				-0.3
1,083,193	-				-0.5
1,083,200	-				+0.5
1,083,213	+				+0.9
1,083,213	+				-0.3
1,083,213	+				-1.1
1,083,214	-				-0.5
1,083,214	-				-1.7
1,083,217	+				-0.1
1,083,218	-				-0.4
1,083,218	-				+0.5
1,083,300	+				+0.1
1,083,301	-				+0.2
1,083,301	-				+0.1
1,083,301	-				-0.9
1,083,301	-				-0.4
1,083,376	+				-0.6
1,083,421	+				-0.9
1,083,421	+				-0.1
1,083,422	-				-1.8
1,083,481	+				-1.4
1,083,493	-				-0.4
1,083,502	+				-0.9
1,083,503	-				-2.8
1,083,507	-				+0.7
1,083,513	+				+2.9
1,083,513	+				-0.1
1,083,514	-				-0.3
1,083,514	-				+0.6
1,083,516	+				-0.3
1,083,516	+				+0.1
1,083,517	-				+0.5
1,083,517	-				-0.2
1,083,652	-		Echvi_0938	0.26	+0.6
1,083,661	+		Echvi_0938	0.28	-0.9
1,083,682	+		Echvi_0938	0.32	-0.3
1,083,682	+		Echvi_0938	0.32	+0.3
1,083,682	+		Echvi_0938	0.32	-0.7
1,083,683	-		Echvi_0938	0.32	-0.9
1,083,850	+		Echvi_0938	0.64	-1.2
1,083,850	+		Echvi_0938	0.64	-0.3
1,083,850	+		Echvi_0938	0.64	-0.3
1,083,851	-		Echvi_0938	0.64	+1.3
1,083,972	-		Echvi_0938	0.88	-0.5
1,083,990	+				+0.7
1,084,012	-				-0.4
1,084,089	+				-0.1
1,084,089	+				-0.0
1,084,090	-				-0.6
1,084,090	-				+1.3
1,084,090	-				-0.4
1,084,140	-				-0.4
1,084,157	+				+1.4
1,084,158	-				-1.6
1,084,180	-				-0.1
1,084,192	-				-1.2
1,084,192	-				-0.0
1,084,216	+				+0.1
1,084,216	+				+0.3
1,084,289	-		Echvi_0939	0.13	-0.9
1,084,303	+		Echvi_0939	0.14	+3.3
1,084,402	+		Echvi_0939	0.23	+0.5
1,084,403	-		Echvi_0939	0.23	-2.7
1,084,591	-		Echvi_0939	0.38	+0.8
1,084,662	-		Echvi_0939	0.44	-0.0
1,084,662	-		Echvi_0939	0.44	+0.6
1,084,693	-		Echvi_0939	0.47	-2.4
1,084,784	-		Echvi_0939	0.54	-0.1
1,084,889	+		Echvi_0939	0.63	-0.9
1,084,889	+		Echvi_0939	0.63	-0.2
1,084,890	-		Echvi_0939	0.63	-0.1
1,084,924	+		Echvi_0939	0.66	+1.2
1,084,924	+		Echvi_0939	0.66	-0.8
1,084,925	-		Echvi_0939	0.66	+0.2
1,084,976	+		Echvi_0939	0.70	+1.7
1,084,976	+		Echvi_0939	0.70	-1.3