Experiment: m.b. Vancomycin 0.06 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_0736 and Echvi_0737 are separated by 908 nucleotides Echvi_0737 and Echvi_0738 are separated by 221 nucleotides
Echvi_0736: Echvi_0736 - hypothetical protein, at 824,961 to 825,338
_0736
Echvi_0737: Echvi_0737 - Methylase involved in ubiquinone/menaquinone biosynthesis, at 826,247 to 826,879
_0737
Echvi_0738: Echvi_0738 - Acyl-CoA dehydrogenases, at 827,101 to 828,459
_0738
Position (kb) 826
827 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 825.343 kb on + strand at 825.344 kb on - strand at 825.344 kb on - strand at 825.347 kb on + strand at 825.351 kb on + strand at 825.385 kb on + strand at 825.386 kb on - strand at 825.395 kb on + strand at 825.395 kb on + strand at 825.395 kb on + strand at 825.395 kb on + strand at 825.396 kb on - strand at 825.398 kb on + strand at 825.398 kb on + strand at 825.399 kb on - strand at 825.442 kb on + strand at 825.497 kb on + strand at 825.498 kb on - strand at 825.498 kb on - strand at 825.568 kb on + strand at 825.569 kb on - strand at 825.569 kb on - strand at 825.574 kb on + strand at 825.574 kb on + strand at 825.585 kb on - strand at 825.594 kb on - strand at 825.594 kb on - strand at 825.703 kb on + strand at 825.728 kb on - strand at 825.728 kb on - strand at 825.748 kb on - strand at 825.808 kb on + strand at 825.808 kb on + strand at 825.808 kb on + strand at 825.810 kb on + strand at 825.810 kb on + strand at 825.846 kb on + strand at 825.846 kb on + strand at 825.847 kb on - strand at 825.848 kb on + strand at 825.848 kb on + strand at 825.849 kb on - strand at 825.902 kb on - strand at 825.902 kb on - strand at 825.902 kb on - strand at 825.973 kb on + strand at 825.973 kb on + strand at 825.975 kb on + strand at 825.975 kb on + strand at 825.985 kb on + strand at 825.985 kb on + strand at 825.985 kb on + strand at 826.019 kb on + strand at 826.047 kb on + strand at 826.048 kb on - strand at 826.052 kb on + strand at 826.184 kb on + strand at 826.184 kb on + strand at 826.185 kb on - strand at 826.185 kb on - strand at 826.185 kb on - strand at 826.185 kb on - strand at 826.233 kb on + strand at 826.272 kb on - strand at 826.301 kb on + strand at 826.366 kb on + strand, within Echvi_0737 at 826.366 kb on + strand, within Echvi_0737 at 826.391 kb on - strand, within Echvi_0737 at 826.474 kb on + strand, within Echvi_0737 at 826.475 kb on - strand, within Echvi_0737 at 826.495 kb on + strand, within Echvi_0737 at 826.540 kb on - strand, within Echvi_0737 at 826.631 kb on - strand, within Echvi_0737 at 826.735 kb on + strand, within Echvi_0737 at 826.745 kb on + strand, within Echvi_0737 at 826.746 kb on - strand, within Echvi_0737 at 826.746 kb on - strand, within Echvi_0737 at 826.746 kb on - strand, within Echvi_0737 at 826.747 kb on + strand, within Echvi_0737 at 826.747 kb on + strand, within Echvi_0737 at 826.747 kb on + strand, within Echvi_0737 at 826.749 kb on + strand, within Echvi_0737 at 826.749 kb on + strand, within Echvi_0737 at 826.749 kb on + strand, within Echvi_0737 at 826.749 kb on + strand, within Echvi_0737 at 826.750 kb on - strand, within Echvi_0737 at 826.750 kb on - strand, within Echvi_0737 at 826.750 kb on - strand, within Echvi_0737 at 826.750 kb on - strand, within Echvi_0737 at 826.750 kb on - strand, within Echvi_0737 at 826.750 kb on - strand, within Echvi_0737 at 826.750 kb on - strand, within Echvi_0737 at 826.750 kb on - strand, within Echvi_0737 at 826.777 kb on - strand, within Echvi_0737 at 826.796 kb on - strand, within Echvi_0737 at 826.858 kb on + strand at 826.951 kb on - strand at 826.979 kb on - strand at 826.992 kb on + strand at 827.031 kb on - strand at 827.038 kb on - strand at 827.038 kb on - strand at 827.040 kb on + strand at 827.041 kb on - strand at 827.041 kb on - strand at 827.043 kb on + strand at 827.050 kb on - strand at 827.063 kb on + strand at 827.063 kb on + strand at 827.064 kb on - strand at 827.095 kb on + strand at 827.095 kb on + strand at 827.111 kb on + strand at 827.189 kb on + strand at 827.288 kb on + strand, within Echvi_0738 at 827.289 kb on - strand, within Echvi_0738 at 827.289 kb on - strand, within Echvi_0738 at 827.436 kb on + strand, within Echvi_0738 at 827.436 kb on + strand, within Echvi_0738 at 827.436 kb on + strand, within Echvi_0738 at 827.437 kb on - strand, within Echvi_0738 at 827.437 kb on - strand, within Echvi_0738 at 827.437 kb on - strand, within Echvi_0738 at 827.437 kb on - strand, within Echvi_0738 at 827.437 kb on - strand, within Echvi_0738 at 827.437 kb on - strand, within Echvi_0738 at 827.437 kb on - strand, within Echvi_0738 at 827.479 kb on + strand, within Echvi_0738 at 827.479 kb on + strand, within Echvi_0738 at 827.479 kb on + strand, within Echvi_0738 at 827.479 kb on + strand, within Echvi_0738 at 827.479 kb on + strand, within Echvi_0738 at 827.480 kb on - strand, within Echvi_0738 at 827.480 kb on - strand, within Echvi_0738 at 827.480 kb on - strand, within Echvi_0738 at 827.480 kb on - strand, within Echvi_0738 at 827.480 kb on - strand, within Echvi_0738 at 827.480 kb on - strand, within Echvi_0738 at 827.480 kb on - strand, within Echvi_0738 at 827.480 kb on - strand, within Echvi_0738 at 827.560 kb on - strand, within Echvi_0738 at 827.608 kb on + strand, within Echvi_0738 at 827.702 kb on + strand, within Echvi_0738 at 827.733 kb on + strand, within Echvi_0738 at 827.740 kb on - strand, within Echvi_0738 at 827.859 kb on + strand, within Echvi_0738 at 827.860 kb on - strand, within Echvi_0738
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Vancomycin 0.06 mg/ml remove 825,343 + +0.1 825,344 - -0.5 825,344 - -1.0 825,347 + -0.7 825,351 + +1.3 825,385 + +0.5 825,386 - +1.0 825,395 + -0.5 825,395 + +0.3 825,395 + -0.1 825,395 + -1.0 825,396 - -0.2 825,398 + -0.7 825,398 + +0.1 825,399 - -0.4 825,442 + +0.9 825,497 + +0.5 825,498 - -0.6 825,498 - +0.6 825,568 + +1.6 825,569 - -1.0 825,569 - -2.6 825,574 + +1.0 825,574 + +0.3 825,585 - +0.5 825,594 - -0.5 825,594 - -0.1 825,703 + -0.2 825,728 - +0.0 825,728 - -0.3 825,748 - -1.0 825,808 + -0.6 825,808 + -0.4 825,808 + +0.0 825,810 + +0.8 825,810 + -0.3 825,846 + +3.6 825,846 + +0.0 825,847 - +0.0 825,848 + -1.5 825,848 + -1.2 825,849 - -0.1 825,902 - -0.3 825,902 - +2.0 825,902 - -0.4 825,973 + -2.7 825,973 + +1.6 825,975 + +0.6 825,975 + -0.3 825,985 + +0.0 825,985 + -0.4 825,985 + +0.8 826,019 + +0.6 826,047 + -0.4 826,048 - +0.6 826,052 + -0.4 826,184 + -0.4 826,184 + +0.0 826,185 - -0.8 826,185 - -2.8 826,185 - +1.0 826,185 - +0.3 826,233 + -0.6 826,272 - -0.6 826,301 + +0.3 826,366 + Echvi_0737 0.19 -0.7 826,366 + Echvi_0737 0.19 -0.2 826,391 - Echvi_0737 0.23 +2.4 826,474 + Echvi_0737 0.36 -1.1 826,475 - Echvi_0737 0.36 +0.6 826,495 + Echvi_0737 0.39 +1.5 826,540 - Echvi_0737 0.46 +0.5 826,631 - Echvi_0737 0.61 -0.2 826,735 + Echvi_0737 0.77 +0.1 826,745 + Echvi_0737 0.79 +0.5 826,746 - Echvi_0737 0.79 +1.2 826,746 - Echvi_0737 0.79 -0.2 826,746 - Echvi_0737 0.79 -0.5 826,747 + Echvi_0737 0.79 +0.9 826,747 + Echvi_0737 0.79 +0.4 826,747 + Echvi_0737 0.79 -0.1 826,749 + Echvi_0737 0.79 +0.7 826,749 + Echvi_0737 0.79 -0.0 826,749 + Echvi_0737 0.79 +0.0 826,749 + Echvi_0737 0.79 +0.8 826,750 - Echvi_0737 0.79 +1.1 826,750 - Echvi_0737 0.79 -0.1 826,750 - Echvi_0737 0.79 +1.0 826,750 - Echvi_0737 0.79 +0.3 826,750 - Echvi_0737 0.79 -0.1 826,750 - Echvi_0737 0.79 +1.0 826,750 - Echvi_0737 0.79 -0.1 826,750 - Echvi_0737 0.79 -2.8 826,777 - Echvi_0737 0.84 +1.6 826,796 - Echvi_0737 0.87 +0.7 826,858 + +0.4 826,951 - -1.7 826,979 - +0.2 826,992 + -1.3 827,031 - +0.8 827,038 - +1.0 827,038 - -1.0 827,040 + +0.0 827,041 - -2.0 827,041 - -1.3 827,043 + +0.8 827,050 - +0.7 827,063 + -1.0 827,063 + -0.2 827,064 - -1.5 827,095 + +0.1 827,095 + -1.5 827,111 + -1.1 827,189 + -1.4 827,288 + Echvi_0738 0.14 -0.8 827,289 - Echvi_0738 0.14 -0.5 827,289 - Echvi_0738 0.14 +0.5 827,436 + Echvi_0738 0.25 -0.9 827,436 + Echvi_0738 0.25 -0.7 827,436 + Echvi_0738 0.25 -0.7 827,437 - Echvi_0738 0.25 -0.3 827,437 - Echvi_0738 0.25 -0.7 827,437 - Echvi_0738 0.25 +0.0 827,437 - Echvi_0738 0.25 -0.0 827,437 - Echvi_0738 0.25 +0.4 827,437 - Echvi_0738 0.25 +0.2 827,437 - Echvi_0738 0.25 +0.2 827,479 + Echvi_0738 0.28 -0.2 827,479 + Echvi_0738 0.28 -0.8 827,479 + Echvi_0738 0.28 +0.2 827,479 + Echvi_0738 0.28 -0.5 827,479 + Echvi_0738 0.28 +0.8 827,480 - Echvi_0738 0.28 -0.5 827,480 - Echvi_0738 0.28 +0.6 827,480 - Echvi_0738 0.28 -1.0 827,480 - Echvi_0738 0.28 -1.2 827,480 - Echvi_0738 0.28 +0.9 827,480 - Echvi_0738 0.28 -0.1 827,480 - Echvi_0738 0.28 +0.3 827,480 - Echvi_0738 0.28 +0.3 827,560 - Echvi_0738 0.34 -0.8 827,608 + Echvi_0738 0.37 +0.5 827,702 + Echvi_0738 0.44 +0.9 827,733 + Echvi_0738 0.47 -1.4 827,740 - Echvi_0738 0.47 -0.4 827,859 + Echvi_0738 0.56 -1.2 827,860 - Echvi_0738 0.56 -1.0
Or see this region's nucleotide sequence