Strain Fitness in Pseudomonas sp. RS175 around PFR28_02602

Experiment: Malonic (C) 10 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Malonic (C) 10 mM
3,075,148	+		PFR28_02601	0.29	-0.6
3,075,148	+		PFR28_02601	0.29	-0.1
3,075,149	-		PFR28_02601	0.29	-0.1
3,075,149	-		PFR28_02601	0.29	+0.2
3,075,178	+		PFR28_02601	0.32	+0.2
3,075,179	-		PFR28_02601	0.32	+1.6
3,075,179	-		PFR28_02601	0.32	+0.5
3,075,179	-		PFR28_02601	0.32	-0.2
3,075,262	+		PFR28_02601	0.40	+0.1
3,075,390	+		PFR28_02601	0.53	+0.6
3,075,390	+		PFR28_02601	0.53	-2.5
3,075,390	+		PFR28_02601	0.53	+0.0
3,075,390	+		PFR28_02601	0.53	-0.8
3,075,390	+		PFR28_02601	0.53	+0.6
3,075,390	+		PFR28_02601	0.53	+0.7
3,075,391	-		PFR28_02601	0.53	-0.7
3,075,391	-		PFR28_02601	0.53	+0.3
3,075,391	-		PFR28_02601	0.53	+1.7
3,075,408	+		PFR28_02601	0.55	-0.9
3,075,408	+		PFR28_02601	0.55	-0.3
3,075,610	+		PFR28_02601	0.75	-1.1
3,075,610	+		PFR28_02601	0.75	+0.1
3,075,611	-		PFR28_02601	0.75	+1.0
3,075,611	-		PFR28_02601	0.75	+0.1
3,075,611	-		PFR28_02601	0.75	-0.0
3,075,900	+				-0.3
3,075,927	+				-0.2
3,075,928	-				-1.1
3,075,928	-				-0.3
3,075,986	+				-1.3
3,075,986	+				-0.3
3,075,987	-				-1.4
3,075,987	-				-1.2
3,075,987	-				+1.2
3,075,987	-				-0.9
3,075,987	-				+0.9
3,076,075	+		PFR28_02602	0.13	+0.4
3,076,104	-		PFR28_02602	0.16	-0.5
3,076,112	+		PFR28_02602	0.16	-0.9
3,076,112	+		PFR28_02602	0.16	+0.4
3,076,112	+		PFR28_02602	0.16	+0.0
3,076,112	+		PFR28_02602	0.16	-2.5
3,076,112	+		PFR28_02602	0.16	-1.2
3,076,112	+		PFR28_02602	0.16	+0.2
3,076,112	+		PFR28_02602	0.16	+0.8
3,076,112	+		PFR28_02602	0.16	+0.3
3,076,112	+		PFR28_02602	0.16	+0.3
3,076,112	+		PFR28_02602	0.16	-0.3
3,076,112	+		PFR28_02602	0.16	+0.6
3,076,112	+		PFR28_02602	0.16	-1.0
3,076,112	+		PFR28_02602	0.16	+0.7
3,076,112	+		PFR28_02602	0.16	+0.6
3,076,112	+		PFR28_02602	0.16	+0.2
3,076,112	+		PFR28_02602	0.16	+1.7
3,076,112	+		PFR28_02602	0.16	-2.0
3,076,112	+		PFR28_02602	0.16	+2.2
3,076,112	+		PFR28_02602	0.16	-1.7
3,076,112	+		PFR28_02602	0.16	-0.3
3,076,112	+		PFR28_02602	0.16	-0.5
3,076,113	-		PFR28_02602	0.17	+0.6
3,076,113	-		PFR28_02602	0.17	+0.3
3,076,113	-		PFR28_02602	0.17	+0.3
3,076,113	-		PFR28_02602	0.17	+1.0
3,076,113	-		PFR28_02602	0.17	+0.4
3,076,113	-		PFR28_02602	0.17	-0.0
3,076,113	-		PFR28_02602	0.17	+1.2
3,076,113	-		PFR28_02602	0.17	-0.2
3,076,113	-		PFR28_02602	0.17	-0.9
3,076,113	-		PFR28_02602	0.17	+1.3
3,076,113	-		PFR28_02602	0.17	+0.3
3,076,113	-		PFR28_02602	0.17	+0.0
3,076,113	-		PFR28_02602	0.17	+0.8
3,076,113	-		PFR28_02602	0.17	-0.7
3,076,113	-		PFR28_02602	0.17	-0.7
3,076,113	-		PFR28_02602	0.17	+0.2
3,076,113	-		PFR28_02602	0.17	+1.0
3,076,113	-		PFR28_02602	0.17	+1.4
3,076,113	-		PFR28_02602	0.17	-0.6
3,076,113	-		PFR28_02602	0.17	-1.7
3,076,113	-		PFR28_02602	0.17	+0.9
3,076,113	-		PFR28_02602	0.17	-2.4
3,076,113	-		PFR28_02602	0.17	+1.8
3,076,113	-		PFR28_02602	0.17	+0.1
3,076,113	-		PFR28_02602	0.17	+0.2
3,076,113	-		PFR28_02602	0.17	-1.2
3,076,113	-		PFR28_02602	0.17	+0.2
3,076,205	+		PFR28_02602	0.26	+0.0
3,076,205	+		PFR28_02602	0.26	+1.8
3,076,205	+		PFR28_02602	0.26	-0.2
3,076,206	-		PFR28_02602	0.26	+0.7
3,076,206	-		PFR28_02602	0.26	-0.7
3,076,295	+		PFR28_02602	0.35	+0.4
3,076,296	-		PFR28_02602	0.35	-1.6
3,076,297	+		PFR28_02602	0.35	-0.7
3,076,298	-		PFR28_02602	0.35	-0.5
3,076,316	+		PFR28_02602	0.37	+4.7
3,076,316	+		PFR28_02602	0.37	-0.3
3,076,316	+		PFR28_02602	0.37	+0.0
3,076,317	-		PFR28_02602	0.37	+0.3
3,076,317	-		PFR28_02602	0.37	+0.4
3,076,318	+		PFR28_02602	0.37	-0.5
3,076,366	+		PFR28_02602	0.42	+0.7
3,076,366	+		PFR28_02602	0.42	+1.1
3,076,366	+		PFR28_02602	0.42	+0.0
3,076,367	-		PFR28_02602	0.42	-1.3
3,076,367	-		PFR28_02602	0.42	+0.9
3,076,367	-		PFR28_02602	0.42	+1.2
3,076,436	-		PFR28_02602	0.49	-2.2
3,076,471	+		PFR28_02602	0.52	-0.7
3,076,496	+		PFR28_02602	0.55	-0.8
3,076,521	-		PFR28_02602	0.57	-1.1
3,076,553	+		PFR28_02602	0.60	-1.7
3,076,553	+		PFR28_02602	0.60	+1.2
3,076,553	+		PFR28_02602	0.60	+0.1
3,076,553	+		PFR28_02602	0.60	+0.6
3,076,553	+		PFR28_02602	0.60	+0.1
3,076,554	-		PFR28_02602	0.60	+1.0
3,076,554	-		PFR28_02602	0.60	+0.1
3,076,554	-		PFR28_02602	0.60	+0.3
3,076,554	-		PFR28_02602	0.60	+0.7
3,076,622	+		PFR28_02602	0.67	-0.1
3,076,622	+		PFR28_02602	0.67	-0.6
3,076,622	+		PFR28_02602	0.67	+0.3
3,076,623	-		PFR28_02602	0.67	-0.6
3,076,623	-		PFR28_02602	0.67	+0.1
3,076,623	-		PFR28_02602	0.67	-2.0
3,076,637	+		PFR28_02602	0.69	-0.8
3,076,637	+		PFR28_02602	0.69	-0.1
3,076,666	+		PFR28_02602	0.72	-0.1
3,076,666	+		PFR28_02602	0.72	-1.5
3,076,666	+		PFR28_02602	0.72	+0.8
3,076,667	-		PFR28_02602	0.72	+0.4
3,076,694	+		PFR28_02602	0.74	-0.5
3,076,694	+		PFR28_02602	0.74	+1.8
3,076,695	-		PFR28_02602	0.74	-1.1
3,076,695	-		PFR28_02602	0.74	+2.6
3,076,695	-		PFR28_02602	0.74	+0.1
3,076,823	+		PFR28_02602	0.87	+0.3
3,076,823	+		PFR28_02602	0.87	-0.2
3,076,823	+		PFR28_02602	0.87	+0.3
3,076,824	-		PFR28_02602	0.87	+1.3
3,076,824	-		PFR28_02602	0.87	+0.3
3,076,824	-		PFR28_02602	0.87	-0.1
3,076,826	+		PFR28_02602	0.87	-0.2
3,076,826	+		PFR28_02602	0.87	+0.8
3,076,826	+		PFR28_02602	0.87	+0.1
3,076,826	+		PFR28_02602	0.87	-0.2
3,076,827	-		PFR28_02602	0.88	+0.6
3,076,827	-		PFR28_02602	0.88	+0.3
3,076,827	-		PFR28_02602	0.88	-1.7
3,076,827	-		PFR28_02602	0.88	+1.2
3,076,827	-		PFR28_02602	0.88	+0.5
3,076,963	+				-0.9
3,077,021	+				+0.7
3,077,021	+				+0.3
3,077,270	+		PFR28_02603	0.18	-0.3
3,077,270	+		PFR28_02603	0.18	-2.9
3,077,270	+		PFR28_02603	0.18	-2.7
3,077,270	+		PFR28_02603	0.18	-1.6
3,077,271	-		PFR28_02603	0.18	-3.4
3,077,615	+		PFR28_02603	0.43	-1.9
3,077,615	+		PFR28_02603	0.43	-2.3
3,077,615	+		PFR28_02603	0.43	-3.4
3,077,615	+		PFR28_02603	0.43	-1.3
3,077,615	+		PFR28_02603	0.43	-1.3
3,077,615	+		PFR28_02603	0.43	-3.1
3,077,615	+		PFR28_02603	0.43	-0.4
3,077,616	-		PFR28_02603	0.43	-2.7
3,077,616	-		PFR28_02603	0.43	-2.2
3,077,616	-		PFR28_02603	0.43	-2.4
3,077,616	-		PFR28_02603	0.43	-2.7
3,077,616	-		PFR28_02603	0.43	-0.6
3,077,616	-		PFR28_02603	0.43	-3.1
3,077,616	-		PFR28_02603	0.43	-2.6
3,077,616	-		PFR28_02603	0.43	-3.6
3,077,616	-		PFR28_02603	0.43	+0.4
3,077,616	-		PFR28_02603	0.43	-3.0
3,077,616	-		PFR28_02603	0.43	-3.1
3,077,616	-		PFR28_02603	0.43	+0.1
3,077,616	-		PFR28_02603	0.43	-2.2
3,077,675	+		PFR28_02603	0.47	-4.2