Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_4200

Experiment: marine broth

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	marine broth
5,014,525	+		Echvi_4199	0.29	+0.9
5,014,532	-		Echvi_4199	0.29	-0.9
5,014,532	-		Echvi_4199	0.29	+2.2
5,014,561	+		Echvi_4199	0.31	+1.6
5,014,610	-		Echvi_4199	0.35	-0.6
5,014,611	+		Echvi_4199	0.35	-0.3
5,014,621	+		Echvi_4199	0.36	+0.5
5,014,629	+		Echvi_4199	0.37	-0.7
5,014,630	-		Echvi_4199	0.37	+0.3
5,014,630	-		Echvi_4199	0.37	-0.7
5,014,630	-		Echvi_4199	0.37	-0.4
5,014,687	+		Echvi_4199	0.42	-0.7
5,014,717	+		Echvi_4199	0.44	+0.5
5,014,723	-		Echvi_4199	0.44	-0.2
5,014,723	-		Echvi_4199	0.44	+0.3
5,014,723	-		Echvi_4199	0.44	-0.3
5,014,737	+		Echvi_4199	0.46	+0.3
5,014,737	+		Echvi_4199	0.46	-0.2
5,014,738	-		Echvi_4199	0.46	+0.6
5,014,738	-		Echvi_4199	0.46	-0.7
5,014,746	+		Echvi_4199	0.46	+0.3
5,014,746	+		Echvi_4199	0.46	+0.5
5,014,777	+		Echvi_4199	0.49	+0.0
5,014,777	+		Echvi_4199	0.49	+0.7
5,014,777	+		Echvi_4199	0.49	-0.1
5,014,777	+		Echvi_4199	0.49	-0.5
5,014,777	+		Echvi_4199	0.49	-0.6
5,014,777	+		Echvi_4199	0.49	-1.2
5,014,777	+		Echvi_4199	0.49	-1.8
5,014,777	+		Echvi_4199	0.49	+0.5
5,014,777	+		Echvi_4199	0.49	+0.1
5,014,778	-		Echvi_4199	0.49	+0.3
5,014,778	-		Echvi_4199	0.49	-0.5
5,014,778	-		Echvi_4199	0.49	-1.3
5,014,778	-		Echvi_4199	0.49	+0.5
5,014,778	-		Echvi_4199	0.49	+0.1
5,014,779	+		Echvi_4199	0.49	-0.6
5,014,779	+		Echvi_4199	0.49	-0.5
5,014,779	+		Echvi_4199	0.49	-1.7
5,014,779	+		Echvi_4199	0.49	-1.2
5,014,779	+		Echvi_4199	0.49	+1.8
5,014,780	-		Echvi_4199	0.49	+1.8
5,014,780	-		Echvi_4199	0.49	-0.6
5,014,780	-		Echvi_4199	0.49	-0.2
5,014,780	-		Echvi_4199	0.49	+0.5
5,014,780	-		Echvi_4199	0.49	+0.8
5,014,804	-		Echvi_4199	0.51	+1.2
5,014,823	-		Echvi_4199	0.52	-0.7
5,014,862	-		Echvi_4199	0.56	-0.0
5,014,862	-		Echvi_4199	0.56	+0.2
5,014,925	+		Echvi_4199	0.61	-0.0
5,014,925	+		Echvi_4199	0.61	+0.1
5,014,926	-		Echvi_4199	0.61	+0.6
5,014,957	+		Echvi_4199	0.63	-0.2
5,014,967	+		Echvi_4199	0.64	+0.5
5,014,976	-		Echvi_4199	0.65	-0.5
5,014,976	-		Echvi_4199	0.65	+0.8
5,014,982	-		Echvi_4199	0.65	-1.2
5,015,006	-		Echvi_4199	0.67	-0.1
5,015,007	+		Echvi_4199	0.67	-0.9
5,015,007	+				+3.4
5,015,008	-		Echvi_4199	0.67	+1.2
5,015,028	+		Echvi_4199	0.69	+0.0
5,015,028	+		Echvi_4199	0.69	-0.1
5,015,028	+		Echvi_4199	0.69	+0.7
5,015,031	-		Echvi_4199	0.69	+0.9
5,015,036	-		Echvi_4199	0.69	+1.4
5,015,036	-		Echvi_4199	0.69	-0.9
5,015,036	-		Echvi_4199	0.69	+1.3
5,015,053	+		Echvi_4199	0.71	+0.3
5,015,143	-				+0.8
5,015,217	-		Echvi_4199	0.84	+0.7
5,015,236	+		Echvi_4199	0.85	-1.1
5,015,259	-		Echvi_4199	0.87	-0.2
5,015,276	+		Echvi_4199	0.89	-2.6
5,015,305	-				+1.2
5,015,364	-				-0.2
5,015,376	-				-0.6
5,015,420	+				-0.0
5,015,421	-				+0.2
5,015,424	-				-0.2
5,015,447	-				-0.9
5,015,453	-				+0.2
5,015,457	-				-0.7
5,015,457	-				-1.5
5,015,460	+				-0.1
5,015,460	+				+0.0
5,015,465	+				-0.2
5,015,523	+				-0.4
5,015,523	+				-2.7
5,015,524	-				+0.1
5,015,529	-				-0.3
5,015,551	-				+0.1
5,015,588	-				-0.8
5,015,591	+				-0.1
5,015,591	+				+0.0
5,015,591	+				+0.2
5,015,656	-				+0.1
5,015,724	+		Echvi_4200	0.13	-1.1
5,015,725	-		Echvi_4200	0.13	+0.2
5,015,748	+		Echvi_4200	0.14	-0.5
5,015,748	+		Echvi_4200	0.14	+0.3
5,015,794	+		Echvi_4200	0.17	+0.9
5,015,796	+		Echvi_4200	0.17	-0.1
5,015,797	-		Echvi_4200	0.17	-0.6
5,015,807	+		Echvi_4200	0.17	-1.9
5,015,807	+		Echvi_4200	0.17	+1.8
5,015,808	-		Echvi_4200	0.18	+0.2
5,015,808	-		Echvi_4200	0.18	+1.0
5,015,808	-		Echvi_4200	0.18	+0.3
5,015,811	+		Echvi_4200	0.18	-0.8
5,015,812	-		Echvi_4200	0.18	+0.5
5,015,827	+		Echvi_4200	0.19	-0.8
5,015,869	+		Echvi_4200	0.21	-1.1
5,015,869	+		Echvi_4200	0.21	-0.3
5,015,869	+		Echvi_4200	0.21	-1.8
5,015,869	+		Echvi_4200	0.21	-1.0
5,015,869	+		Echvi_4200	0.21	-1.2
5,015,869	+		Echvi_4200	0.21	+1.2
5,015,869	+		Echvi_4200	0.21	+0.1
5,015,869	+		Echvi_4200	0.21	-1.9
5,015,870	-		Echvi_4200	0.21	+0.4
5,015,870	-		Echvi_4200	0.21	+1.1
5,015,870	-		Echvi_4200	0.21	-1.7
5,015,870	-		Echvi_4200	0.21	-0.6
5,015,870	-		Echvi_4200	0.21	+2.4
5,015,870	-		Echvi_4200	0.21	-0.1
5,015,870	-		Echvi_4200	0.21	-0.3
5,015,870	-		Echvi_4200	0.21	-0.7
5,015,871	+		Echvi_4200	0.21	+0.1
5,015,871	+		Echvi_4200	0.21	-0.8
5,015,951	-		Echvi_4200	0.25	+1.1
5,015,951	-		Echvi_4200	0.25	+0.2
5,015,965	-		Echvi_4200	0.26	-2.0
5,015,995	-		Echvi_4200	0.27	+0.4
5,015,996	+		Echvi_4200	0.27	-0.2
5,016,018	-		Echvi_4200	0.28	-0.3
5,016,092	+		Echvi_4200	0.32	+0.4
5,016,092	+		Echvi_4200	0.32	-1.4
5,016,093	-		Echvi_4200	0.32	-0.4
5,016,093	-		Echvi_4200	0.32	+0.4
5,016,093	-		Echvi_4200	0.32	-0.1
5,016,093	-		Echvi_4200	0.32	-0.2
5,016,103	-		Echvi_4200	0.33	-2.3
5,016,129	+		Echvi_4200	0.34	+1.8
5,016,130	-		Echvi_4200	0.34	-0.4
5,016,142	-		Echvi_4200	0.35	+0.2
5,016,144	+		Echvi_4200	0.35	-0.0
5,016,164	-		Echvi_4200	0.36	-1.1
5,016,265	+		Echvi_4200	0.41	-0.2
5,016,265	+		Echvi_4200	0.41	+1.6
5,016,266	-		Echvi_4200	0.41	+1.1
5,016,346	+		Echvi_4200	0.45	-0.9
5,016,352	+		Echvi_4200	0.45	+0.4
5,016,353	-		Echvi_4200	0.45	+1.2
5,016,353	-		Echvi_4200	0.45	-0.5
5,016,355	+		Echvi_4200	0.45	-0.0
5,016,355	+		Echvi_4200	0.45	-0.8
5,016,355	+		Echvi_4200	0.45	-2.9
5,016,356	-		Echvi_4200	0.45	-0.1
5,016,356	-		Echvi_4200	0.45	-0.1
5,016,356	-		Echvi_4200	0.45	+1.3
5,016,356	-		Echvi_4200	0.45	+0.5
5,016,363	+		Echvi_4200	0.46	+0.1
5,016,364	-		Echvi_4200	0.46	-0.7
5,016,367	-		Echvi_4200	0.46	-0.5
5,016,367	-		Echvi_4200	0.46	+0.0
5,016,401	+		Echvi_4200	0.48	-1.2
5,016,402	-		Echvi_4200	0.48	-0.4
5,016,460	-		Echvi_4200	0.51	-1.1
5,016,460	-		Echvi_4200	0.51	-0.5
5,016,476	-		Echvi_4200	0.52	+0.2
5,016,527	+		Echvi_4200	0.54	+0.2
5,016,528	-		Echvi_4200	0.54	-0.5
5,016,561	+		Echvi_4200	0.56	-0.5
5,016,561	+		Echvi_4200	0.56	-0.3
5,016,562	-		Echvi_4200	0.56	+1.4
5,016,586	+		Echvi_4200	0.57	+0.3
5,016,587	-		Echvi_4200	0.57	-1.2
5,016,606	+		Echvi_4200	0.58	+0.3
5,016,606	+		Echvi_4200	0.58	-0.8
5,016,606	+		Echvi_4200	0.58	+0.4
5,016,607	-		Echvi_4200	0.58	+0.2
5,016,607	-		Echvi_4200	0.58	-0.7
5,016,607	-		Echvi_4200	0.58	-0.3
5,016,607	-		Echvi_4200	0.58	-0.4
5,016,609	+				+1.8
5,016,610	-		Echvi_4200	0.58	-0.2
5,016,690	+		Echvi_4200	0.62	+0.5
5,016,690	+		Echvi_4200	0.62	-0.9
5,016,691	-		Echvi_4200	0.63	-0.4
5,016,694	+		Echvi_4200	0.63	-0.1
5,016,695	-		Echvi_4200	0.63	-0.7
5,016,710	-		Echvi_4200	0.64	-0.0
5,016,728	-		Echvi_4200	0.64	-0.8
5,016,743	+		Echvi_4200	0.65	-0.3
5,016,743	+		Echvi_4200	0.65	-0.7
5,016,757	-		Echvi_4200	0.66	+0.6
5,016,781	+		Echvi_4200	0.67	-1.1
5,016,781	+		Echvi_4200	0.67	-0.1
5,016,809	-		Echvi_4200	0.69	-0.5
5,016,829	-		Echvi_4200	0.70	-1.0
5,016,928	+		Echvi_4200	0.75	-0.9
5,016,928	+		Echvi_4200	0.75	+0.6
5,016,928	+		Echvi_4200	0.75	-1.4
5,016,929	-		Echvi_4200	0.75	+0.0
5,016,940	+		Echvi_4200	0.75	-0.2
5,016,941	-		Echvi_4200	0.75	-0.6
5,017,003	+		Echvi_4200	0.78	-2.3
5,017,004	-		Echvi_4200	0.78	-0.5
5,017,011	+		Echvi_4200	0.79	-0.9
5,017,013	+		Echvi_4200	0.79	+0.6
5,017,014	-		Echvi_4200	0.79	-0.2
5,017,131	+		Echvi_4200	0.85	-0.4
5,017,135	-		Echvi_4200	0.85	-0.0
5,017,189	+		Echvi_4200	0.88	-1.3
5,017,192	+		Echvi_4200	0.88	+0.4
5,017,204	-		Echvi_4200	0.89	+0.3
5,017,310	-				+0.9
5,017,310	-				-0.9
5,017,310	-				-0.5
5,017,310	-				-0.5
5,017,310	-				+1.2
5,017,310	-				-0.6
5,017,314	+				+0.7
5,017,314	+				-0.4
5,017,314	+				+0.0
5,017,314	+				+1.6
5,017,343	-				+0.2
5,017,357	-				-0.5
5,017,374	+				+2.3
5,017,374	+				+0.1
5,017,374	+				+1.3
5,017,374	+				-0.0
5,017,374	+				+1.5
5,017,374	+				+0.2
5,017,375	-				+1.4
5,017,375	-				-1.0
5,017,375	-				+0.1
5,017,377	+				+1.8
5,017,377	+				+1.8
5,017,378	-				-1.0
5,017,378	-				+0.2
5,017,378	-				+0.1
5,017,378	-				+0.4
5,017,378	-				+0.6
5,017,378	-				+0.6
5,017,378	-				-1.7
5,017,388	-				-1.5
5,017,446	-				-1.8
5,017,446	-				-0.4
5,017,470	+				-0.4
5,017,470	+				+0.4
5,017,470	+				+0.4
5,017,471	-				-0.1
5,017,471	-				-0.2
5,017,471	-				+1.1
5,017,504	-				-1.3
5,017,570	-				+1.0
5,017,621	+				-0.7
5,017,633	-				-0.0
5,017,678	+				-0.4
5,017,722	+				+0.1
5,017,722	+				-0.7
5,017,722	+				-0.2
5,017,722	+				+0.1
5,017,723	-				-0.5
5,017,723	-				-1.2
5,017,723	-				-1.7
5,017,728	+				-0.8
5,017,728	+				+0.2
5,017,729	-				-0.4
5,017,735	+				-0.3
5,017,839	+				-0.9
5,017,839	+				+0.0
5,017,840	-				-0.4
5,017,840	-				+0.3
5,017,843	+				+0.1
5,017,844	-				+0.5
5,017,844	-				-1.7
5,017,844	-				+0.3
5,017,844	-				+0.2
5,017,844	-				-1.7
5,017,853	-				-1.5
5,017,853	-				-0.2
5,017,862	-				-1.1
5,017,957	+		Echvi_4201	0.11	-1.4
5,017,961	-		Echvi_4201	0.11	-1.0
5,017,981	+		Echvi_4201	0.11	+0.3
5,017,981	+		Echvi_4201	0.11	+0.1
5,018,040	+		Echvi_4201	0.13	-1.0
5,018,041	-		Echvi_4201	0.13	-0.2
5,018,108	+		Echvi_4201	0.14	-1.7
5,018,109	-		Echvi_4201	0.14	-0.6
5,018,111	+		Echvi_4201	0.14	-1.0
5,018,112	-		Echvi_4201	0.14	+1.8
5,018,112	-		Echvi_4201	0.14	+3.4
5,018,123	-		Echvi_4201	0.15	-0.8
5,018,161	+		Echvi_4201	0.15	-1.3
5,018,161	+		Echvi_4201	0.15	+0.0
5,018,161	+		Echvi_4201	0.15	-0.9
5,018,162	-		Echvi_4201	0.15	+0.4
5,018,162	-		Echvi_4201	0.15	-0.2
5,018,169	+		Echvi_4201	0.16	-0.2
5,018,169	+		Echvi_4201	0.16	+0.2
5,018,179	-		Echvi_4201	0.16	-0.3
5,018,179	-		Echvi_4201	0.16	-0.3
5,018,201	+		Echvi_4201	0.16	-0.5
5,018,201	+		Echvi_4201	0.16	-1.8
5,018,201	+		Echvi_4201	0.16	-0.2
5,018,201	+		Echvi_4201	0.16	-1.8
5,018,201	+		Echvi_4201	0.16	-0.4
5,018,201	+		Echvi_4201	0.16	-1.5
5,018,201	+		Echvi_4201	0.16	+0.3
5,018,201	+		Echvi_4201	0.16	+0.5
5,018,201	+		Echvi_4201	0.16	-1.9
5,018,201	+		Echvi_4201	0.16	+1.3
5,018,202	-		Echvi_4201	0.16	+0.1
5,018,202	-		Echvi_4201	0.16	+0.6
5,018,203	+		Echvi_4201	0.16	+0.6
5,018,203	+		Echvi_4201	0.16	-0.4
5,018,267	+		Echvi_4201	0.18	-0.0
5,018,267	+		Echvi_4201	0.18	-0.5
5,018,267	+		Echvi_4201	0.18	-1.9
5,018,327	+		Echvi_4201	0.19	-0.2
5,018,337	-		Echvi_4201	0.20	-0.2
5,018,355	+		Echvi_4201	0.20	+0.1
5,018,355	+		Echvi_4201	0.20	+0.7
5,018,355	+		Echvi_4201	0.20	-1.8
5,018,355	+		Echvi_4201	0.20	+1.0
5,018,355	+		Echvi_4201	0.20	+0.1
5,018,355	+		Echvi_4201	0.20	-0.6
5,018,355	+		Echvi_4201	0.20	-0.1
5,018,355	+		Echvi_4201	0.20	-0.7
5,018,355	+		Echvi_4201	0.20	+0.5
5,018,355	+		Echvi_4201	0.20	+0.6
5,018,355	+		Echvi_4201	0.20	-1.4
5,018,355	+		Echvi_4201	0.20	-0.1
5,018,356	-		Echvi_4201	0.20	+0.3
5,018,356	-		Echvi_4201	0.20	-0.0
5,018,356	-		Echvi_4201	0.20	-0.0
5,018,356	-		Echvi_4201	0.20	-0.5
5,018,360	+		Echvi_4201	0.20	-0.8
5,018,391	-		Echvi_4201	0.21	+1.1
5,018,391	-		Echvi_4201	0.21	+1.2
5,018,408	+		Echvi_4201	0.21	-0.5
5,018,408	+		Echvi_4201	0.21	-0.3
5,018,410	+		Echvi_4201	0.21	-0.9
5,018,410	+		Echvi_4201	0.21	-0.7
5,018,411	-		Echvi_4201	0.21	-1.4
5,018,411	-		Echvi_4201	0.21	+0.3