Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1668

Experiment: marine broth

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	marine broth
1,940,874	+		Echvi_1667	0.71	+0.3
1,940,970	+		Echvi_1667	0.75	-0.5
1,940,971	-		Echvi_1667	0.75	+0.1
1,940,984	+		Echvi_1667	0.75	+1.3
1,940,984	+		Echvi_1667	0.75	-0.3
1,940,985	-		Echvi_1667	0.75	+1.4
1,940,985	-		Echvi_1667	0.75	+0.1
1,941,055	+		Echvi_1667	0.78	+1.1
1,941,055	+		Echvi_1667	0.78	-0.0
1,941,055	+		Echvi_1667	0.78	+0.1
1,941,056	-		Echvi_1667	0.78	+0.4
1,941,099	-		Echvi_1667	0.79	-1.1
1,941,110	-		Echvi_1667	0.80	+0.7
1,941,374	+		Echvi_1667	0.89	+0.1
1,941,374	+		Echvi_1667	0.89	-0.8
1,941,435	-				+0.1
1,941,435	-				-1.0
1,941,510	+				-1.4
1,941,545	-				-0.7
1,941,559	+				+1.2
1,941,610	+				+1.4
1,941,610	+				-0.3
1,941,675	+				+0.6
1,941,676	-				-0.5
1,941,685	+				+0.4
1,941,692	+				-1.1
1,941,693	-				+1.6
1,941,693	-				-0.8
1,941,701	+				+0.6
1,941,701	+				+0.6
1,941,701	+				-0.5
1,941,800	+				+0.2
1,941,800	+				+0.2
1,941,801	-				+0.9
1,941,801	-				-0.4
1,941,844	+				+0.5
1,941,844	+				-0.2
1,941,845	-				-1.8
1,941,845	-				-0.4
1,941,877	+				-0.3
1,941,878	-				+0.9
1,941,878	-				-0.6
1,941,878	-				+0.8
1,941,878	-				+1.0
1,942,011	+				-0.4
1,942,011	+				-0.4
1,942,170	-				-1.0
1,942,241	-		Echvi_1668	0.12	-1.1
1,942,387	+		Echvi_1668	0.16	-0.5
1,942,426	-		Echvi_1668	0.17	-0.9
1,942,426	-		Echvi_1668	0.17	+0.8
1,942,444	+		Echvi_1668	0.18	-1.2
1,942,444	+		Echvi_1668	0.18	-0.2
1,942,444	+		Echvi_1668	0.18	-2.0
1,942,444	+		Echvi_1668	0.18	+0.2
1,942,445	-		Echvi_1668	0.18	-0.1
1,942,511	+		Echvi_1668	0.19	-0.1
1,942,511	+		Echvi_1668	0.19	+0.6
1,942,512	-		Echvi_1668	0.19	+0.4
1,942,552	-		Echvi_1668	0.21	-1.1
1,942,575	+		Echvi_1668	0.21	-0.2
1,942,642	+		Echvi_1668	0.23	+1.5
1,942,643	-		Echvi_1668	0.23	+1.9
1,942,643	-		Echvi_1668	0.23	-1.0
1,942,683	-		Echvi_1668	0.24	-0.5
1,942,710	-		Echvi_1668	0.25	+0.6
1,942,710	-		Echvi_1668	0.25	-0.5
1,942,847	+		Echvi_1668	0.29	-0.1
1,942,931	-		Echvi_1668	0.31	-1.4
1,942,961	-		Echvi_1668	0.32	+0.6
1,942,971	-		Echvi_1668	0.32	+0.3
1,942,971	-		Echvi_1668	0.32	+0.2
1,943,282	+		Echvi_1668	0.41	-0.7
1,943,282	+		Echvi_1668	0.41	-0.1
1,943,282	+		Echvi_1668	0.41	-0.8
1,943,316	+		Echvi_1668	0.42	+0.0
1,943,316	+		Echvi_1668	0.42	+0.3
1,943,317	-		Echvi_1668	0.42	-1.4
1,943,371	+		Echvi_1668	0.44	-0.4
1,943,372	-		Echvi_1668	0.44	+0.0
1,943,402	+		Echvi_1668	0.45	-3.0
1,943,429	-		Echvi_1668	0.45	-0.4
1,943,429	-		Echvi_1668	0.45	-0.2
1,943,429	-		Echvi_1668	0.45	-0.6
1,943,461	+		Echvi_1668	0.46	-0.8
1,943,462	-		Echvi_1668	0.46	+0.7
1,943,462	-		Echvi_1668	0.46	+0.7
1,943,462	-		Echvi_1668	0.46	-1.0
1,943,574	-		Echvi_1668	0.50	-0.2
1,943,574	-		Echvi_1668	0.50	-0.0
1,943,574	-		Echvi_1668	0.50	+0.2
1,943,574	-		Echvi_1668	0.50	+3.3
1,943,575	+		Echvi_1668	0.50	-0.7
1,943,616	-		Echvi_1668	0.51	-1.2
1,943,618	+		Echvi_1668	0.51	-0.2
1,943,618	+		Echvi_1668	0.51	+0.1
1,943,618	+		Echvi_1668	0.51	-0.9
1,943,619	-		Echvi_1668	0.51	+0.6
1,943,619	-		Echvi_1668	0.51	-0.3
1,943,619	-		Echvi_1668	0.51	-0.2
1,943,619	-		Echvi_1668	0.51	-0.3
1,943,619	-		Echvi_1668	0.51	+0.4
1,943,625	-		Echvi_1668	0.51	+0.1
1,943,637	-		Echvi_1668	0.51	+0.7
1,943,666	+		Echvi_1668	0.52	-0.3
1,943,667	-		Echvi_1668	0.52	-0.3
1,943,681	-		Echvi_1668	0.53	+0.3
1,943,681	-		Echvi_1668	0.53	-0.1
1,943,681	-		Echvi_1668	0.53	-0.8
1,943,725	-		Echvi_1668	0.54	-0.5
1,943,764	+		Echvi_1668	0.55	+0.1
1,943,846	+		Echvi_1668	0.57	+0.7
1,943,849	-		Echvi_1668	0.57	+0.3
1,943,985	-		Echvi_1668	0.61	-0.1
1,943,990	+		Echvi_1668	0.61	-0.2
1,944,025	+		Echvi_1668	0.62	+0.4
1,944,060	+				+1.9
1,944,060	+		Echvi_1668	0.63	-1.1
1,944,128	+		Echvi_1668	0.65	-0.7
1,944,128	+		Echvi_1668	0.65	+1.1
1,944,128	+		Echvi_1668	0.65	-1.9
1,944,131	+		Echvi_1668	0.65	-0.4
1,944,131	+		Echvi_1668	0.65	-1.6
1,944,132	-		Echvi_1668	0.65	-0.5
1,944,132	-		Echvi_1668	0.65	+0.6
1,944,252	-		Echvi_1668	0.69	-0.7
1,944,252	-		Echvi_1668	0.69	-0.2
1,944,284	+		Echvi_1668	0.70	+0.2
1,944,334	-		Echvi_1668	0.71	-0.1
1,944,334	-		Echvi_1668	0.71	-0.4
1,944,585	+		Echvi_1668	0.78	-1.0
1,944,662	+		Echvi_1668	0.80	+0.6
1,944,663	-		Echvi_1668	0.80	-0.6
1,944,736	+		Echvi_1668	0.82	-1.8
1,944,736	+		Echvi_1668	0.82	-0.1
1,944,737	-		Echvi_1668	0.82	-0.4
1,944,743	+		Echvi_1668	0.83	-1.3
1,944,744	-		Echvi_1668	0.83	-0.3
1,944,926	+		Echvi_1668	0.88	-0.1
1,944,926	+		Echvi_1668	0.88	+0.4
1,944,926	+		Echvi_1668	0.88	+0.6
1,944,926	+		Echvi_1668	0.88	+0.5
1,944,926	+		Echvi_1668	0.88	-0.4
1,944,927	-		Echvi_1668	0.88	-1.2
1,944,927	-		Echvi_1668	0.88	-0.5
1,944,951	-		Echvi_1668	0.88	-1.8
1,945,055	+				-0.4
1,945,055	+				-0.5
1,945,056	-				+0.5
1,945,058	-				+1.1
1,945,078	+				-0.1
1,945,079	-				+0.7
1,945,132	+				-0.9
1,945,136	+				-0.2
1,945,292	+				+0.4
1,945,293	-				+0.9
1,945,293	-				+1.5
1,945,293	-				+0.8
1,945,295	-				-0.9
1,945,295	-				+0.0
1,945,300	+				-0.9
1,945,301	-				-0.7
1,945,369	+				+0.9
1,945,384	+				+0.2
1,945,411	+				-1.1
1,945,412	-				-0.3
1,945,416	-				-0.2
1,945,423	+				+0.7
1,945,447	-				+0.8
1,945,450	-				-0.4
1,945,453	+				-0.3
1,945,453	+				-0.4
1,945,453	+				+0.5
1,945,453	+				-1.5
1,945,454	-				-0.5
1,945,454	-				-0.8
1,945,454	-				-0.5
1,945,555	+				-0.2
1,945,559	+				-1.0
1,945,745	-		Echvi_1669	0.14	+1.2
1,945,799	+		Echvi_1669	0.16	+0.4
1,945,871	+		Echvi_1669	0.19	+0.4
1,945,908	+		Echvi_1669	0.20	+1.2
1,945,908	+		Echvi_1669	0.20	+0.9
1,945,908	+		Echvi_1669	0.20	+0.6
1,945,909	-		Echvi_1669	0.20	+0.4
1,945,964	-		Echvi_1669	0.23	+0.2
1,945,964	-		Echvi_1669	0.23	-1.4
1,946,036	+		Echvi_1669	0.26	-0.1
1,946,037	-		Echvi_1669	0.26	-0.1
1,946,076	+		Echvi_1669	0.27	-0.2
1,946,077	-		Echvi_1669	0.27	-0.9
1,946,083	-		Echvi_1669	0.27	-0.6
1,946,083	-		Echvi_1669	0.27	-1.1
1,946,088	+		Echvi_1669	0.28	+1.3
1,946,088	+		Echvi_1669	0.28	-1.6
1,946,088	+		Echvi_1669	0.28	+0.1
1,946,088	+		Echvi_1669	0.28	+0.6
1,946,089	-		Echvi_1669	0.28	+0.7
1,946,089	-		Echvi_1669	0.28	-1.2
1,946,089	-		Echvi_1669	0.28	+0.9
1,946,231	-		Echvi_1669	0.33	-0.5
1,946,236	-		Echvi_1669	0.34	+0.0
1,946,250	+		Echvi_1669	0.34	-0.0
1,946,250	+		Echvi_1669	0.34	+0.1
1,946,250	+		Echvi_1669	0.34	+1.4
1,946,251	-		Echvi_1669	0.34	-0.5
1,946,251	-		Echvi_1669	0.34	+0.7
1,946,270	+		Echvi_1669	0.35	-0.8
1,946,271	-		Echvi_1669	0.35	-0.8
1,946,271	-		Echvi_1669	0.35	+0.8
1,946,271	-		Echvi_1669	0.35	+0.1
1,946,271	-		Echvi_1669	0.35	+0.3
1,946,295	+		Echvi_1669	0.36	+0.5
1,946,295	+		Echvi_1669	0.36	+1.6
1,946,295	+		Echvi_1669	0.36	+0.5
1,946,295	+		Echvi_1669	0.36	-0.1
1,946,296	-		Echvi_1669	0.36	-1.5
1,946,296	-		Echvi_1669	0.36	-1.2
1,946,296	-		Echvi_1669	0.36	-1.2
1,946,296	-		Echvi_1669	0.36	+0.2
1,946,296	-		Echvi_1669	0.36	+0.1
1,946,296	-		Echvi_1669	0.36	+1.4
1,946,296	-		Echvi_1669	0.36	+0.1
1,946,296	-		Echvi_1669	0.36	+0.1
1,946,296	-		Echvi_1669	0.36	-0.5
1,946,297	+		Echvi_1669	0.36	+1.2
1,946,297	+		Echvi_1669	0.36	-0.2
1,946,324	+		Echvi_1669	0.37	+0.6
1,946,324	+		Echvi_1669	0.37	+0.2
1,946,324	+		Echvi_1669	0.37	+0.8
1,946,325	-		Echvi_1669	0.37	-1.3
1,946,325	-		Echvi_1669	0.37	+0.9
1,946,325	-		Echvi_1669	0.37	+0.5
1,946,325	-		Echvi_1669	0.37	-0.7
1,946,325	-		Echvi_1669	0.37	+0.5
1,946,325	-		Echvi_1669	0.37	+0.3
1,946,325	-		Echvi_1669	0.37	+1.1
1,946,325	-		Echvi_1669	0.37	-0.4