Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1392

Experiment: marine broth

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	marine broth
1,602,579	+		Echvi_1391	0.16	+0.5
1,602,580	-		Echvi_1391	0.16	+0.4
1,602,580	-		Echvi_1391	0.16	-1.0
1,602,600	+		Echvi_1391	0.18	+0.2
1,602,600	+		Echvi_1391	0.18	-0.3
1,602,601	-		Echvi_1391	0.18	+1.6
1,602,601	-		Echvi_1391	0.18	-0.5
1,602,601	-		Echvi_1391	0.18	+0.6
1,602,601	-		Echvi_1391	0.18	-1.7
1,602,601	-		Echvi_1391	0.18	-0.6
1,602,602	+		Echvi_1391	0.18	-0.4
1,602,603	-		Echvi_1391	0.18	-1.5
1,602,603	-		Echvi_1391	0.18	+0.4
1,602,603	-		Echvi_1391	0.18	+0.6
1,602,633	+		Echvi_1391	0.21	+0.4
1,602,774	+		Echvi_1391	0.34	-0.2
1,602,775	-		Echvi_1391	0.34	+0.9
1,602,888	-		Echvi_1391	0.44	+0.4
1,602,917	+		Echvi_1391	0.47	-0.7
1,602,964	+		Echvi_1391	0.51	+1.4
1,602,964	+		Echvi_1391	0.51	+2.0
1,602,996	-		Echvi_1391	0.54	+0.6
1,602,997	+		Echvi_1391	0.54	-0.7
1,603,074	-		Echvi_1391	0.61	-0.4
1,603,118	+		Echvi_1391	0.65	+0.4
1,603,119	-		Echvi_1391	0.65	-0.5
1,603,149	+		Echvi_1391	0.68	-0.2
1,603,150	-		Echvi_1391	0.68	+1.1
1,603,171	+		Echvi_1391	0.70	-0.7
1,603,197	+		Echvi_1391	0.72	-0.2
1,603,197	+		Echvi_1391	0.72	-0.7
1,603,197	+		Echvi_1391	0.72	+0.4
1,603,229	+		Echvi_1391	0.75	-0.4
1,603,230	-		Echvi_1391	0.75	+0.9
1,603,257	+		Echvi_1391	0.78	-0.6
1,603,258	-		Echvi_1391	0.78	+1.2
1,603,258	-		Echvi_1391	0.78	-0.1
1,603,261	+		Echvi_1391	0.78	+0.4
1,603,261	+		Echvi_1391	0.78	+0.7
1,603,262	-		Echvi_1391	0.78	-0.5
1,603,262	-		Echvi_1391	0.78	-0.4
1,603,442	+				-1.6
1,603,443	-				+1.0
1,603,443	-				-0.3
1,603,443	-				-0.0
1,603,443	-				-1.1
1,603,443	-				-2.7
1,603,444	+				-0.3
1,603,445	-				-0.2
1,603,447	-				+1.1
1,603,447	-				-0.1
1,603,447	-				+0.4
1,603,463	-				-0.2
1,603,473	+				+0.5
1,603,473	+				-0.3
1,603,474	-				+0.3
1,603,505	+				-0.6
1,603,508	-				-2.8
1,603,508	-				-0.6
1,603,514	+				+2.0
1,603,514	+				+0.8
1,603,529	+				-0.6
1,603,561	+				+0.1
1,603,561	+				+0.7
1,603,562	-				+1.0
1,603,586	-				-1.0
1,603,719	+				-0.2
1,603,720	-				-1.5
1,603,726	+				-0.8
1,603,727	-				-0.6
1,603,732	-				-1.2
1,603,750	+				-0.1
1,603,750	+				-2.2
1,603,751	-				-0.2
1,603,751	-				+1.0
1,603,752	+				-0.2
1,603,752	+				-1.4
1,603,753	-				-1.0
1,603,771	+				-0.0
1,603,827	+		Echvi_1392	0.10	-0.4
1,603,828	-		Echvi_1392	0.10	+0.2
1,603,835	-		Echvi_1392	0.10	-0.7
1,603,837	+		Echvi_1392	0.10	-0.8
1,603,861	+		Echvi_1392	0.11	-1.3
1,603,861	+		Echvi_1392	0.11	-1.1
1,603,873	-		Echvi_1392	0.12	+0.7
1,603,873	-		Echvi_1392	0.12	-0.6
1,603,873	-				+2.0
1,603,897	-		Echvi_1392	0.12	+0.4
1,604,131	+		Echvi_1392	0.20	-0.9
1,604,132	-		Echvi_1392	0.20	-0.3
1,604,151	+		Echvi_1392	0.21	-0.2
1,604,196	+		Echvi_1392	0.22	-0.5
1,604,299	-		Echvi_1392	0.25	+0.7
1,604,332	+		Echvi_1392	0.26	+0.4
1,604,333	-		Echvi_1392	0.26	-1.0
1,604,336	-		Echvi_1392	0.27	-0.1
1,604,397	-		Echvi_1392	0.29	+0.4
1,604,463	+		Echvi_1392	0.31	-0.9
1,604,485	+		Echvi_1392	0.31	+0.9
1,604,485	+		Echvi_1392	0.31	-0.3
1,604,486	-		Echvi_1392	0.31	+0.1
1,604,495	+		Echvi_1392	0.32	-0.1
1,604,495	+		Echvi_1392	0.32	-1.6
1,604,496	-		Echvi_1392	0.32	+0.9
1,604,516	+		Echvi_1392	0.32	-1.0
1,604,516	+		Echvi_1392	0.32	+0.2
1,604,517	-		Echvi_1392	0.32	-1.1
1,604,517	-		Echvi_1392	0.32	-0.6
1,604,540	-		Echvi_1392	0.33	-0.5
1,604,540	-		Echvi_1392	0.33	-0.2
1,604,557	+		Echvi_1392	0.34	-1.3
1,604,566	+		Echvi_1392	0.34	+0.8
1,604,567	-		Echvi_1392	0.34	+0.4
1,604,578	+		Echvi_1392	0.34	-0.8
1,604,579	-		Echvi_1392	0.34	-0.8
1,604,579	-		Echvi_1392	0.34	+0.2
1,604,643	+		Echvi_1392	0.36	+0.4
1,604,829	+		Echvi_1392	0.42	-0.6
1,604,830	-		Echvi_1392	0.43	-0.8
1,604,840	+		Echvi_1392	0.43	-0.9
1,604,840	+		Echvi_1392	0.43	+0.1
1,604,841	-		Echvi_1392	0.43	-1.1
1,604,841	-		Echvi_1392	0.43	-0.5
1,604,908	+		Echvi_1392	0.45	-1.0
1,604,908	+		Echvi_1392	0.45	+0.1
1,604,909	-		Echvi_1392	0.45	+0.6
1,605,002	-		Echvi_1392	0.48	+0.1
1,605,002	-		Echvi_1392	0.48	-0.1
1,605,013	+		Echvi_1392	0.48	-1.1
1,605,028	-		Echvi_1392	0.49	+0.1
1,605,076	-		Echvi_1392	0.50	-2.4
1,605,105	+		Echvi_1392	0.51	+0.2
1,605,114	+		Echvi_1392	0.52	-0.4
1,605,114	+		Echvi_1392	0.52	+1.4
1,605,114	+		Echvi_1392	0.52	-0.5
1,605,114	+		Echvi_1392	0.52	-0.1
1,605,114	+		Echvi_1392	0.52	-0.0
1,605,114	+		Echvi_1392	0.52	-0.4
1,605,115	-		Echvi_1392	0.52	+0.4
1,605,116	+		Echvi_1392	0.52	+1.0
1,605,261	+		Echvi_1392	0.56	-1.9
1,605,261	+		Echvi_1392	0.56	+0.2
1,605,262	-		Echvi_1392	0.57	-1.1
1,605,268	+		Echvi_1392	0.57	+0.3
1,605,317	-		Echvi_1392	0.58	-0.8
1,605,451	+		Echvi_1392	0.63	+0.1
1,605,459	+		Echvi_1392	0.63	-1.7
1,605,459	+		Echvi_1392	0.63	+0.2
1,605,460	-		Echvi_1392	0.63	-0.1
1,605,460	-		Echvi_1392	0.63	-0.7
1,605,460	-		Echvi_1392	0.63	+0.0
1,605,463	+		Echvi_1392	0.63	+1.2
1,605,463	+		Echvi_1392	0.63	-0.6
1,605,495	+		Echvi_1392	0.64	-1.1
1,605,496	-		Echvi_1392	0.64	-2.4
1,605,519	-		Echvi_1392	0.65	-1.0
1,605,529	+		Echvi_1392	0.65	-1.7
1,605,541	+		Echvi_1392	0.66	+0.2
1,605,541	+		Echvi_1392	0.66	-0.6
1,605,553	+		Echvi_1392	0.66	-1.0
1,605,558	+		Echvi_1392	0.66	+0.3
1,605,558	+		Echvi_1392	0.66	+2.0
1,605,634	+		Echvi_1392	0.69	-0.8
1,605,700	+		Echvi_1392	0.71	-1.0
1,605,700	+		Echvi_1392	0.71	-1.2
1,605,701	-		Echvi_1392	0.71	-1.3
1,605,701	-		Echvi_1392	0.71	+0.4
1,605,701	-		Echvi_1392	0.71	+0.3
1,605,701	-		Echvi_1392	0.71	-0.0
1,605,807	-		Echvi_1392	0.74	+1.0
1,605,875	-		Echvi_1392	0.76	+0.8
1,605,875	-		Echvi_1392	0.76	-0.3
1,605,883	+		Echvi_1392	0.77	+0.1
1,605,884	-		Echvi_1392	0.77	-0.2
1,605,887	+		Echvi_1392	0.77	-0.4
1,605,888	-		Echvi_1392	0.77	-0.3
1,605,888	-		Echvi_1392	0.77	+2.0
1,605,888	-		Echvi_1392	0.77	-0.9
1,605,889	+		Echvi_1392	0.77	-0.3
1,605,890	-		Echvi_1392	0.77	-1.0
1,605,890	-		Echvi_1392	0.77	+0.3
1,605,946	+		Echvi_1392	0.79	-1.0
1,605,955	-		Echvi_1392	0.79	+0.5
1,606,015	-		Echvi_1392	0.81	-0.6
1,606,061	+		Echvi_1392	0.82	-0.5
1,606,061	+		Echvi_1392	0.82	+0.8
1,606,062	-		Echvi_1392	0.82	-0.5
1,606,092	+		Echvi_1392	0.83	+2.0
1,606,093	-		Echvi_1392	0.83	+0.1
1,606,093	-		Echvi_1392	0.83	-1.2
1,606,101	+		Echvi_1392	0.84	+0.1
1,606,189	+		Echvi_1392	0.87	+0.1
1,606,190	-		Echvi_1392	0.87	+0.3
1,606,293	+		Echvi_1392	0.90	-0.8
1,606,347	+				-1.0
1,606,348	-				-0.8
1,606,408	+				+0.3
1,606,408	+				+0.8
1,606,420	-				-0.6
1,606,426	-				+0.7
1,606,442	+				-0.9
1,606,461	+				-0.1
1,606,497	-				-1.8
1,606,497	-				+1.0
1,606,511	+				+0.5
1,606,512	-				-1.5
1,606,512	-				+0.5
1,606,512	-				+0.4
1,606,540	+				+1.2
1,606,541	-				-0.0
1,606,541	-				+0.0
1,606,561	+				-0.6
1,606,588	-				-1.9
1,606,625	-				-0.6
1,606,656	-				+0.7
1,606,690	+				-0.6
1,606,690	+				-0.3
1,606,703	+				+0.4
1,606,704	-				-1.6
1,606,708	+				+0.1
1,606,759	+				+0.2
1,606,791	+		Echvi_1393	0.10	+1.4
1,606,825	+		Echvi_1393	0.13	-0.7
1,606,835	+		Echvi_1393	0.13	-1.5
1,606,836	-		Echvi_1393	0.13	+0.4
1,606,897	+		Echvi_1393	0.18	-0.1
1,606,987	+		Echvi_1393	0.24	-0.3
1,606,987	+		Echvi_1393	0.24	-0.3
1,607,041	+		Echvi_1393	0.28	+0.7
1,607,042	-		Echvi_1393	0.28	+1.6
1,607,055	-		Echvi_1393	0.29	+2.0
1,607,158	+		Echvi_1393	0.37	+0.1
1,607,158	+		Echvi_1393	0.37	-0.2
1,607,204	+		Echvi_1393	0.40	-2.2
1,607,204	+		Echvi_1393	0.40	-0.1
1,607,205	-		Echvi_1393	0.40	-0.8
1,607,205	-		Echvi_1393	0.40	-0.7
1,607,262	+		Echvi_1393	0.45	-0.9
1,607,262	+		Echvi_1393	0.45	+0.8
1,607,263	-		Echvi_1393	0.45	-0.2
1,607,320	+		Echvi_1393	0.49	+0.0
1,607,347	+		Echvi_1393	0.51	-0.1
1,607,348	-		Echvi_1393	0.51	+0.4
1,607,383	+		Echvi_1393	0.53	-0.8
1,607,457	+		Echvi_1393	0.59	-1.1
1,607,457	+		Echvi_1393	0.59	-0.3
1,607,457	+		Echvi_1393	0.59	+0.0
1,607,544	-		Echvi_1393	0.65	-0.5
1,607,589	+		Echvi_1393	0.68	+2.0
1,607,590	-		Echvi_1393	0.69	-1.0
1,607,590	-		Echvi_1393	0.69	-0.9
1,607,590	-		Echvi_1393	0.69	+0.1