Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1317

Experiment: marine broth

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	marine broth
1,520,193	-		Echvi_1316	0.33	+1.2
1,520,247	+		Echvi_1316	0.37	-0.4
1,520,247	+		Echvi_1316	0.37	+0.8
1,520,248	-		Echvi_1316	0.37	+0.3
1,520,341	-		Echvi_1316	0.44	+0.4
1,520,341	-		Echvi_1316	0.44	-0.2
1,520,343	+		Echvi_1316	0.44	-1.5
1,520,363	+		Echvi_1316	0.45	-0.6
1,520,363	+		Echvi_1316	0.45	+0.9
1,520,363	+		Echvi_1316	0.45	+1.5
1,520,363	+		Echvi_1316	0.45	+0.5
1,520,364	-		Echvi_1316	0.45	-0.3
1,520,364	-		Echvi_1316	0.45	-0.3
1,520,364	-		Echvi_1316	0.45	-0.8
1,520,365	+		Echvi_1316	0.45	+1.0
1,520,365	+		Echvi_1316	0.45	-0.6
1,520,365	+		Echvi_1316	0.45	+0.4
1,520,365	+		Echvi_1316	0.45	+0.0
1,520,365	+		Echvi_1316	0.45	+0.1
1,520,365	+		Echvi_1316	0.45	-0.7
1,520,365	+		Echvi_1316	0.45	-0.0
1,520,365	+				+1.4
1,520,366	-		Echvi_1316	0.45	-0.6
1,520,366	-		Echvi_1316	0.45	+0.4
1,520,366	-		Echvi_1316	0.45	-0.9
1,520,369	+		Echvi_1316	0.46	+0.2
1,520,370	-		Echvi_1316	0.46	-0.0
1,520,370	-		Echvi_1316	0.46	-0.2
1,520,370	-		Echvi_1316	0.46	+2.6
1,520,371	+		Echvi_1316	0.46	+0.5
1,520,372	-		Echvi_1316	0.46	-0.4
1,520,388	-		Echvi_1316	0.47	-0.1
1,520,408	-		Echvi_1316	0.48	-0.2
1,520,533	+		Echvi_1316	0.57	+1.1
1,520,533	+		Echvi_1316	0.57	+0.3
1,520,533	+		Echvi_1316	0.57	+0.2
1,520,533	+		Echvi_1316	0.57	-0.8
1,520,534	-		Echvi_1316	0.57	+1.0
1,520,534	-		Echvi_1316	0.57	+0.6
1,520,534	-		Echvi_1316	0.57	-0.1
1,520,577	+		Echvi_1316	0.60	-0.2
1,520,578	-		Echvi_1316	0.60	-0.2
1,520,578	-		Echvi_1316	0.60	-1.8
1,520,578	-		Echvi_1316	0.60	-0.2
1,520,578	-		Echvi_1316	0.60	-1.2
1,520,578	-		Echvi_1316	0.60	-0.9
1,520,578	-		Echvi_1316	0.60	-1.0
1,520,578	-		Echvi_1316	0.60	-0.5
1,520,605	+		Echvi_1316	0.62	+0.1
1,520,605	+		Echvi_1316	0.62	+0.2
1,520,605	+		Echvi_1316	0.62	+0.6
1,520,605	+		Echvi_1316	0.62	-0.1
1,520,605	+		Echvi_1316	0.62	-0.2
1,520,606	-		Echvi_1316	0.62	-0.2
1,520,609	-		Echvi_1316	0.62	+0.2
1,520,609	-		Echvi_1316	0.62	-1.6
1,520,609	-		Echvi_1316	0.62	+0.4
1,520,620	-		Echvi_1316	0.63	-0.4
1,520,629	+		Echvi_1316	0.64	-0.5
1,520,654	-		Echvi_1316	0.66	-0.2
1,520,663	-		Echvi_1316	0.66	+0.6
1,520,705	+		Echvi_1316	0.69	+0.4
1,520,705	+		Echvi_1316	0.69	+0.4
1,520,705	+		Echvi_1316	0.69	-1.2
1,520,705	+		Echvi_1316	0.69	-0.3
1,520,705	+		Echvi_1316	0.69	-0.6
1,520,706	-		Echvi_1316	0.69	-1.6
1,520,706	-		Echvi_1316	0.69	+0.3
1,520,706	-		Echvi_1316	0.69	+0.1
1,520,706	-		Echvi_1316	0.69	+0.5
1,520,706	-		Echvi_1316	0.69	+0.5
1,520,706	-		Echvi_1316	0.69	+0.2
1,520,724	+		Echvi_1316	0.70	+0.5
1,520,724	+		Echvi_1316	0.70	+0.5
1,520,724	+		Echvi_1316	0.70	-0.4
1,520,725	-		Echvi_1316	0.71	-0.3
1,520,725	-		Echvi_1316	0.71	+0.5
1,520,725	-		Echvi_1316	0.71	-0.6
1,520,725	-		Echvi_1316	0.71	-1.3
1,520,865	+		Echvi_1316	0.80	+0.7
1,520,903	+		Echvi_1316	0.83	-0.8
1,520,986	-		Echvi_1316	0.89	-1.3
1,520,994	+		Echvi_1316	0.89	-0.3
1,521,075	-				-0.9
1,521,075	-				-0.7
1,521,078	-				+0.5
1,521,084	+				+0.4
1,521,085	-				-2.3
1,521,129	+				+0.7
1,521,131	+				+0.6
1,521,131	+				+0.5
1,521,151	+				+0.3
1,521,151	+				+1.0
1,521,152	-				+0.0
1,521,152	-				-0.5
1,521,175	+				-0.3
1,521,175	+				-0.1
1,521,175	+				-1.1
1,521,175	+				+0.3
1,521,176	-				-0.9
1,521,208	+				-0.5
1,521,209	-				+0.6
1,521,228	+				-0.1
1,521,228	+				-1.3
1,521,229	-				+0.3
1,521,238	+				+0.7
1,521,238	+				-1.1
1,521,238	+				+0.7
1,521,238	+				-0.5
1,521,238	+				-0.2
1,521,238	+				+1.0
1,521,238	+				+0.3
1,521,239	-				-0.1
1,521,239	-				-0.7
1,521,239	-				-0.0
1,521,242	+				-1.7
1,521,242	+				-0.6
1,521,243	-				+0.5
1,521,243	-				+0.8
1,521,243	-				+1.1
1,521,260	+		Echvi_1317	0.11	-0.5
1,521,285	+		Echvi_1317	0.14	+1.3
1,521,311	+		Echvi_1317	0.17	-0.5
1,521,312	-		Echvi_1317	0.17	-2.0
1,521,312	-		Echvi_1317	0.17	+1.2
1,521,325	+		Echvi_1317	0.18	+0.4
1,521,325	+		Echvi_1317	0.18	+0.4
1,521,325	+		Echvi_1317	0.18	-0.9
1,521,326	-		Echvi_1317	0.18	-0.5
1,521,328	+		Echvi_1317	0.18	-0.2
1,521,328	+		Echvi_1317	0.18	-0.4
1,521,329	-		Echvi_1317	0.18	-0.1
1,521,329	-		Echvi_1317	0.18	-2.0
1,521,388	+		Echvi_1317	0.25	-1.0
1,521,394	+		Echvi_1317	0.25	+1.6
1,521,395	-		Echvi_1317	0.25	+0.5
1,521,395	-		Echvi_1317	0.25	+0.3
1,521,467	+		Echvi_1317	0.33	+0.1
1,521,467	+		Echvi_1317	0.33	-0.4
1,521,468	-		Echvi_1317	0.33	-1.8
1,521,468	-		Echvi_1317	0.33	+0.4
1,521,468	-		Echvi_1317	0.33	+0.1
1,521,468	-		Echvi_1317	0.33	-1.0
1,521,524	+		Echvi_1317	0.39	-1.8
1,521,596	-		Echvi_1317	0.46	-1.0
1,521,626	-		Echvi_1317	0.49	-1.5
1,521,670	-		Echvi_1317	0.54	+4.2
1,521,670	-		Echvi_1317	0.54	-0.7
1,521,677	+		Echvi_1317	0.55	-0.5
1,521,698	+		Echvi_1317	0.57	-0.8
1,521,698	+		Echvi_1317	0.57	+0.6
1,521,698	+		Echvi_1317	0.57	-0.3
1,521,698	+		Echvi_1317	0.57	+0.7
1,521,698	+		Echvi_1317	0.57	-0.5
1,521,698	+		Echvi_1317	0.57	+0.8
1,521,699	-		Echvi_1317	0.57	-0.1
1,521,699	-		Echvi_1317	0.57	-0.9
1,521,699	-		Echvi_1317	0.57	-0.0
1,521,699	-		Echvi_1317	0.57	-1.6
1,521,705	-		Echvi_1317	0.58	-0.5
1,521,720	+		Echvi_1317	0.59	-0.2
1,521,720	+		Echvi_1317	0.59	+1.8
1,521,783	-		Echvi_1317	0.66	-0.2
1,521,783	-		Echvi_1317	0.66	-2.9
1,521,841	-		Echvi_1317	0.72	-0.3
1,521,841	-		Echvi_1317	0.72	-0.3
1,521,880	+		Echvi_1317	0.76	-0.2
1,521,881	-		Echvi_1317	0.76	-0.3
1,521,968	+		Echvi_1317	0.85	-0.2
1,522,069	-				-1.6
1,522,109	+				+2.1
1,522,179	-				+1.2
1,522,179	-				-1.8
1,522,183	-				+0.3
1,522,318	-		Echvi_1318	0.15	+0.2
1,522,322	+		Echvi_1318	0.15	+1.1
1,522,323	-		Echvi_1318	0.15	-0.7
1,522,338	-		Echvi_1318	0.16	+0.1
1,522,356	+		Echvi_1318	0.18	-1.8
1,522,356	+		Echvi_1318	0.18	-0.3
1,522,356	+		Echvi_1318	0.18	-0.2
1,522,356	+		Echvi_1318	0.18	-0.2
1,522,357	-		Echvi_1318	0.18	+0.1
1,522,357	-		Echvi_1318	0.18	+0.2
1,522,520	+		Echvi_1318	0.30	-0.6
1,522,521	-		Echvi_1318	0.30	+0.1
1,522,567	+		Echvi_1318	0.33	-0.0
1,522,610	+		Echvi_1318	0.37	-0.2
1,522,624	+		Echvi_1318	0.38	-0.2
1,522,624	+		Echvi_1318	0.38	+0.2
1,522,624	+		Echvi_1318	0.38	+0.2
1,522,625	-		Echvi_1318	0.38	-1.2
1,522,630	+		Echvi_1318	0.38	-0.0
1,522,734	+		Echvi_1318	0.46	+3.0
1,522,742	-		Echvi_1318	0.46	+0.6
1,522,784	-		Echvi_1318	0.50	-0.7
1,522,803	+		Echvi_1318	0.51	+0.4
1,522,826	-		Echvi_1318	0.53	-1.7
1,522,898	+		Echvi_1318	0.58	-0.4
1,522,909	+		Echvi_1318	0.59	-0.7
1,522,910	-		Echvi_1318	0.59	-0.1
1,522,995	-		Echvi_1318	0.65	-0.3