Experiment: m.b. Dimethyl Sulfoxide 12 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_4586 and Echvi_4587 overlap by 14 nucleotides Echvi_4587 and Echvi_4588 overlap by 4 nucleotides Echvi_4588 and Echvi_4589 are separated by 9 nucleotides
Echvi_4586: Echvi_4586 - von Willebrand factor type A domain., at 5,493,801 to 5,494,808
_4586
Echvi_4587: Echvi_4587 - hypothetical protein, at 5,494,795 to 5,495,298
_4587
Echvi_4588: Echvi_4588 - Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain), at 5,495,295 to 5,496,233
_4588
Echvi_4589: Echvi_4589 - MoxR-like ATPases, at 5,496,243 to 5,497,169
_4589
Position (kb)
5495
5496
5497 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 5494.348 kb on + strand, within Echvi_4586 at 5494.484 kb on + strand, within Echvi_4586 at 5494.746 kb on + strand at 5494.797 kb on - strand at 5494.830 kb on + strand at 5494.967 kb on + strand, within Echvi_4587 at 5494.967 kb on + strand, within Echvi_4587 at 5494.968 kb on - strand, within Echvi_4587 at 5494.968 kb on - strand, within Echvi_4587 at 5494.968 kb on - strand, within Echvi_4587 at 5494.995 kb on - strand, within Echvi_4587 at 5495.018 kb on - strand, within Echvi_4587 at 5495.094 kb on - strand, within Echvi_4587 at 5495.312 kb on + strand at 5495.463 kb on + strand, within Echvi_4588 at 5495.463 kb on + strand, within Echvi_4588 at 5495.463 kb on + strand, within Echvi_4588 at 5495.463 kb on + strand, within Echvi_4588 at 5495.463 kb on + strand, within Echvi_4588 at 5495.463 kb on + strand, within Echvi_4588 at 5495.464 kb on - strand, within Echvi_4588 at 5495.464 kb on - strand, within Echvi_4588 at 5495.464 kb on - strand, within Echvi_4588 at 5495.464 kb on - strand, within Echvi_4588 at 5495.466 kb on - strand, within Echvi_4588 at 5495.466 kb on - strand, within Echvi_4588 at 5495.534 kb on - strand, within Echvi_4588 at 5495.558 kb on + strand, within Echvi_4588 at 5495.581 kb on + strand, within Echvi_4588 at 5495.603 kb on - strand, within Echvi_4588 at 5495.645 kb on + strand, within Echvi_4588 at 5495.652 kb on - strand, within Echvi_4588 at 5495.934 kb on + strand, within Echvi_4588 at 5495.982 kb on - strand, within Echvi_4588 at 5496.046 kb on + strand, within Echvi_4588 at 5496.047 kb on - strand, within Echvi_4588 at 5496.116 kb on + strand, within Echvi_4588 at 5496.164 kb on - strand at 5496.164 kb on - strand at 5496.195 kb on - strand at 5496.212 kb on - strand at 5496.234 kb on - strand at 5496.244 kb on + strand at 5496.245 kb on - strand at 5496.250 kb on - strand at 5496.252 kb on + strand at 5496.258 kb on + strand at 5496.259 kb on - strand at 5496.263 kb on + strand at 5496.264 kb on - strand at 5496.319 kb on + strand at 5496.319 kb on + strand at 5496.319 kb on + strand at 5496.319 kb on + strand at 5496.320 kb on - strand at 5496.320 kb on - strand at 5496.435 kb on + strand, within Echvi_4589 at 5496.490 kb on + strand, within Echvi_4589 at 5496.519 kb on - strand, within Echvi_4589 at 5496.525 kb on + strand, within Echvi_4589 at 5496.526 kb on - strand, within Echvi_4589 at 5496.531 kb on - strand, within Echvi_4589 at 5496.532 kb on + strand, within Echvi_4589 at 5496.742 kb on + strand, within Echvi_4589 at 5496.917 kb on + strand, within Echvi_4589 at 5497.124 kb on + strand at 5497.143 kb on - strand at 5497.154 kb on + strand at 5497.178 kb on + strand at 5497.210 kb on + strand at 5497.210 kb on + strand at 5497.210 kb on + strand at 5497.211 kb on - strand at 5497.211 kb on - strand at 5497.232 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Dimethyl Sulfoxide 12 vol% remove 5,494,348 + Echvi_4586 0.54 -0.1 5,494,484 + Echvi_4586 0.68 -0.4 5,494,746 + +0.3 5,494,797 - +3.5 5,494,830 + -0.8 5,494,967 + Echvi_4587 0.34 -1.7 5,494,967 + Echvi_4587 0.34 -0.1 5,494,968 - Echvi_4587 0.34 +0.9 5,494,968 - Echvi_4587 0.34 +0.0 5,494,968 - Echvi_4587 0.34 +0.1 5,494,995 - Echvi_4587 0.40 -1.7 5,495,018 - Echvi_4587 0.44 +0.1 5,495,094 - Echvi_4587 0.59 +0.9 5,495,312 + +1.5 5,495,463 + Echvi_4588 0.18 -0.1 5,495,463 + Echvi_4588 0.18 -0.6 5,495,463 + Echvi_4588 0.18 +0.4 5,495,463 + Echvi_4588 0.18 -0.7 5,495,463 + Echvi_4588 0.18 -0.9 5,495,463 + Echvi_4588 0.18 -0.1 5,495,464 - Echvi_4588 0.18 -0.7 5,495,464 - Echvi_4588 0.18 -0.7 5,495,464 - Echvi_4588 0.18 +1.9 5,495,464 - Echvi_4588 0.18 -1.2 5,495,466 - Echvi_4588 0.18 -0.3 5,495,466 - Echvi_4588 0.18 -0.6 5,495,534 - Echvi_4588 0.25 -0.5 5,495,558 + Echvi_4588 0.28 +0.9 5,495,581 + Echvi_4588 0.30 +0.2 5,495,603 - Echvi_4588 0.33 -1.4 5,495,645 + Echvi_4588 0.37 +0.1 5,495,652 - Echvi_4588 0.38 +0.2 5,495,934 + Echvi_4588 0.68 -0.7 5,495,982 - Echvi_4588 0.73 -0.8 5,496,046 + Echvi_4588 0.80 +0.9 5,496,047 - Echvi_4588 0.80 +0.7 5,496,116 + Echvi_4588 0.87 -0.6 5,496,164 - -0.3 5,496,164 - -1.3 5,496,195 - -0.3 5,496,212 - +1.2 5,496,234 - -2.0 5,496,244 + -0.9 5,496,245 - -1.4 5,496,250 - -1.0 5,496,252 + +0.9 5,496,258 + +0.4 5,496,259 - +0.6 5,496,263 + -0.4 5,496,264 - +2.7 5,496,319 + +0.5 5,496,319 + -0.1 5,496,319 + -1.3 5,496,319 + -0.0 5,496,320 - +0.0 5,496,320 - +0.2 5,496,435 + Echvi_4589 0.21 -1.0 5,496,490 + Echvi_4589 0.27 +0.6 5,496,519 - Echvi_4589 0.30 +0.3 5,496,525 + Echvi_4589 0.30 -0.6 5,496,526 - Echvi_4589 0.31 -0.4 5,496,531 - Echvi_4589 0.31 -0.6 5,496,532 + Echvi_4589 0.31 -0.3 5,496,742 + Echvi_4589 0.54 +0.2 5,496,917 + Echvi_4589 0.73 +2.7 5,497,124 + -0.9 5,497,143 - -0.2 5,497,154 + -0.1 5,497,178 + +0.5 5,497,210 + -2.5 5,497,210 + +0.3 5,497,210 + -0.5 5,497,211 - -0.9 5,497,211 - -0.6 5,497,232 - +0.9
Or see this region's nucleotide sequence