Experiment: m.b. Dimethyl Sulfoxide 12 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_4212 and Echvi_4213 are separated by 306 nucleotides Echvi_4213 and Echvi_4214 are separated by 372 nucleotides
Echvi_4212: Echvi_4212 - hypothetical protein, at 5,043,065 to 5,044,603
_4212
Echvi_4213: Echvi_4213 - Glutamate 5-kinase, at 5,044,910 to 5,045,701
_4213
Echvi_4214: Echvi_4214 - lysine/tyrosine outer membrane transporter, TonB-dependent receptor component <small>(from data)</small>, at 5,046,074 to 5,048,524
_4214
Position (kb) 5044
5045
5046 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 5043.939 kb on + strand, within Echvi_4212 at 5043.939 kb on + strand, within Echvi_4212 at 5043.940 kb on - strand, within Echvi_4212 at 5043.940 kb on - strand, within Echvi_4212 at 5043.940 kb on - strand, within Echvi_4212 at 5043.940 kb on - strand, within Echvi_4212 at 5044.002 kb on - strand, within Echvi_4212 at 5044.002 kb on - strand, within Echvi_4212 at 5044.005 kb on + strand, within Echvi_4212 at 5044.005 kb on + strand, within Echvi_4212 at 5044.006 kb on - strand, within Echvi_4212 at 5044.072 kb on + strand, within Echvi_4212 at 5044.074 kb on + strand, within Echvi_4212 at 5044.075 kb on - strand, within Echvi_4212 at 5044.075 kb on - strand, within Echvi_4212 at 5044.075 kb on - strand, within Echvi_4212 at 5044.075 kb on - strand, within Echvi_4212 at 5044.075 kb on - strand, within Echvi_4212 at 5044.075 kb on - strand, within Echvi_4212 at 5044.135 kb on + strand, within Echvi_4212 at 5044.135 kb on + strand, within Echvi_4212 at 5044.136 kb on - strand, within Echvi_4212 at 5044.136 kb on - strand, within Echvi_4212 at 5044.160 kb on + strand, within Echvi_4212 at 5044.161 kb on - strand, within Echvi_4212 at 5044.166 kb on + strand, within Echvi_4212 at 5044.167 kb on - strand, within Echvi_4212 at 5044.182 kb on + strand, within Echvi_4212 at 5044.182 kb on + strand, within Echvi_4212 at 5044.183 kb on - strand, within Echvi_4212 at 5044.183 kb on - strand, within Echvi_4212 at 5044.183 kb on - strand, within Echvi_4212 at 5044.208 kb on + strand, within Echvi_4212 at 5044.209 kb on - strand, within Echvi_4212 at 5044.209 kb on - strand, within Echvi_4212 at 5044.209 kb on - strand, within Echvi_4212 at 5044.236 kb on + strand, within Echvi_4212 at 5044.236 kb on + strand, within Echvi_4212 at 5044.353 kb on - strand, within Echvi_4212 at 5044.598 kb on + strand at 5044.598 kb on + strand at 5044.598 kb on + strand at 5044.598 kb on + strand at 5044.656 kb on + strand at 5044.656 kb on + strand at 5044.657 kb on - strand at 5044.663 kb on + strand at 5044.663 kb on + strand at 5044.663 kb on + strand at 5044.664 kb on - strand at 5044.706 kb on - strand at 5044.707 kb on + strand at 5044.722 kb on - strand at 5044.751 kb on - strand at 5044.759 kb on + strand at 5044.760 kb on - strand at 5044.760 kb on - strand at 5044.872 kb on - strand at 5044.880 kb on - strand at 5044.896 kb on + strand at 5044.908 kb on + strand at 5044.963 kb on + strand at 5045.047 kb on + strand, within Echvi_4213 at 5045.047 kb on + strand, within Echvi_4213 at 5045.112 kb on + strand, within Echvi_4213 at 5045.112 kb on + strand, within Echvi_4213 at 5045.112 kb on + strand, within Echvi_4213 at 5045.112 kb on + strand, within Echvi_4213 at 5045.113 kb on - strand, within Echvi_4213 at 5045.113 kb on - strand, within Echvi_4213 at 5045.113 kb on - strand, within Echvi_4213 at 5045.119 kb on - strand, within Echvi_4213 at 5045.147 kb on + strand, within Echvi_4213 at 5045.148 kb on - strand, within Echvi_4213 at 5045.148 kb on - strand, within Echvi_4213 at 5045.187 kb on - strand, within Echvi_4213 at 5045.193 kb on + strand, within Echvi_4213 at 5045.205 kb on - strand, within Echvi_4213 at 5045.363 kb on - strand, within Echvi_4213 at 5045.473 kb on + strand, within Echvi_4213 at 5045.499 kb on + strand, within Echvi_4213 at 5045.519 kb on + strand, within Echvi_4213 at 5045.519 kb on + strand, within Echvi_4213 at 5045.520 kb on - strand, within Echvi_4213 at 5045.520 kb on - strand, within Echvi_4213 at 5045.520 kb on - strand, within Echvi_4213 at 5045.520 kb on - strand, within Echvi_4213 at 5045.520 kb on - strand, within Echvi_4213 at 5045.611 kb on - strand, within Echvi_4213 at 5045.752 kb on + strand at 5045.810 kb on + strand at 5045.811 kb on - strand at 5045.811 kb on - strand at 5045.813 kb on - strand at 5045.934 kb on + strand at 5045.943 kb on + strand at 5045.951 kb on + strand at 5046.050 kb on + strand at 5046.088 kb on - strand at 5046.105 kb on - strand at 5046.124 kb on + strand at 5046.125 kb on - strand at 5046.125 kb on - strand at 5046.177 kb on + strand at 5046.259 kb on - strand at 5046.278 kb on + strand at 5046.438 kb on + strand, within Echvi_4214 at 5046.438 kb on + strand, within Echvi_4214 at 5046.438 kb on + strand, within Echvi_4214 at 5046.438 kb on + strand, within Echvi_4214 at 5046.438 kb on + strand, within Echvi_4214 at 5046.439 kb on - strand, within Echvi_4214 at 5046.439 kb on - strand, within Echvi_4214 at 5046.439 kb on - strand, within Echvi_4214 at 5046.439 kb on - strand, within Echvi_4214 at 5046.439 kb on - strand, within Echvi_4214 at 5046.465 kb on + strand, within Echvi_4214 at 5046.466 kb on - strand, within Echvi_4214 at 5046.516 kb on + strand, within Echvi_4214 at 5046.516 kb on + strand, within Echvi_4214 at 5046.592 kb on + strand, within Echvi_4214 at 5046.593 kb on - strand, within Echvi_4214 at 5046.593 kb on - strand, within Echvi_4214 at 5046.602 kb on + strand, within Echvi_4214 at 5046.602 kb on + strand, within Echvi_4214 at 5046.603 kb on - strand, within Echvi_4214 at 5046.664 kb on + strand, within Echvi_4214 at 5046.668 kb on + strand, within Echvi_4214
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Dimethyl Sulfoxide 12 vol% remove 5,043,939 + Echvi_4212 0.57 -1.0 5,043,939 + Echvi_4212 0.57 -0.2 5,043,940 - Echvi_4212 0.57 +0.3 5,043,940 - Echvi_4212 0.57 -0.3 5,043,940 - Echvi_4212 0.57 +0.9 5,043,940 - Echvi_4212 0.57 +1.0 5,044,002 - Echvi_4212 0.61 -0.9 5,044,002 - Echvi_4212 0.61 -0.2 5,044,005 + Echvi_4212 0.61 -0.1 5,044,005 + Echvi_4212 0.61 +0.3 5,044,006 - Echvi_4212 0.61 +1.3 5,044,072 + Echvi_4212 0.65 -0.2 5,044,074 + Echvi_4212 0.66 -0.5 5,044,075 - Echvi_4212 0.66 -0.2 5,044,075 - Echvi_4212 0.66 -0.3 5,044,075 - Echvi_4212 0.66 -0.2 5,044,075 - Echvi_4212 0.66 -1.7 5,044,075 - Echvi_4212 0.66 +0.1 5,044,075 - Echvi_4212 0.66 -2.0 5,044,135 + Echvi_4212 0.70 +0.1 5,044,135 + Echvi_4212 0.70 +0.4 5,044,136 - Echvi_4212 0.70 -0.2 5,044,136 - Echvi_4212 0.70 +0.3 5,044,160 + Echvi_4212 0.71 +0.8 5,044,161 - Echvi_4212 0.71 -1.4 5,044,166 + Echvi_4212 0.72 -0.5 5,044,167 - Echvi_4212 0.72 -0.9 5,044,182 + Echvi_4212 0.73 +0.7 5,044,182 + Echvi_4212 0.73 +0.0 5,044,183 - Echvi_4212 0.73 -0.7 5,044,183 - Echvi_4212 0.73 -0.5 5,044,183 - Echvi_4212 0.73 +0.1 5,044,208 + Echvi_4212 0.74 -0.2 5,044,209 - Echvi_4212 0.74 -0.3 5,044,209 - Echvi_4212 0.74 -1.0 5,044,209 - Echvi_4212 0.74 +0.4 5,044,236 + Echvi_4212 0.76 +0.8 5,044,236 + Echvi_4212 0.76 -2.1 5,044,353 - Echvi_4212 0.84 +0.7 5,044,598 + -1.1 5,044,598 + -0.5 5,044,598 + +0.4 5,044,598 + +0.8 5,044,656 + +0.3 5,044,656 + -0.7 5,044,657 - -0.2 5,044,663 + -0.4 5,044,663 + -2.1 5,044,663 + -0.3 5,044,664 - -0.3 5,044,706 - -0.2 5,044,707 + +1.0 5,044,722 - +1.0 5,044,751 - +0.2 5,044,759 + -0.5 5,044,760 - -2.6 5,044,760 - +0.3 5,044,872 - +0.4 5,044,880 - +0.4 5,044,896 + -1.1 5,044,908 + -0.0 5,044,963 + +0.6 5,045,047 + Echvi_4213 0.17 +0.6 5,045,047 + Echvi_4213 0.17 -1.9 5,045,112 + Echvi_4213 0.26 +0.6 5,045,112 + Echvi_4213 0.26 +0.6 5,045,112 + Echvi_4213 0.26 -1.0 5,045,112 + Echvi_4213 0.26 -0.5 5,045,113 - Echvi_4213 0.26 +0.4 5,045,113 - Echvi_4213 0.26 +0.8 5,045,113 - Echvi_4213 0.26 +1.8 5,045,119 - Echvi_4213 0.26 +1.0 5,045,147 + Echvi_4213 0.30 -0.2 5,045,148 - Echvi_4213 0.30 -0.4 5,045,148 - Echvi_4213 0.30 -1.4 5,045,187 - Echvi_4213 0.35 -0.5 5,045,193 + Echvi_4213 0.36 -0.2 5,045,205 - Echvi_4213 0.37 +0.1 5,045,363 - Echvi_4213 0.57 +1.3 5,045,473 + Echvi_4213 0.71 -0.3 5,045,499 + Echvi_4213 0.74 -0.4 5,045,519 + Echvi_4213 0.77 -1.4 5,045,519 + Echvi_4213 0.77 -0.4 5,045,520 - Echvi_4213 0.77 -0.2 5,045,520 - Echvi_4213 0.77 -1.9 5,045,520 - Echvi_4213 0.77 -0.9 5,045,520 - Echvi_4213 0.77 -0.2 5,045,520 - Echvi_4213 0.77 -0.1 5,045,611 - Echvi_4213 0.89 -0.9 5,045,752 + +3.4 5,045,810 + +0.3 5,045,811 - -0.3 5,045,811 - -0.1 5,045,813 - -1.3 5,045,934 + -1.1 5,045,943 + +0.3 5,045,951 + -0.4 5,046,050 + +0.8 5,046,088 - -0.0 5,046,105 - -1.3 5,046,124 + -1.7 5,046,125 - +0.4 5,046,125 - +1.0 5,046,177 + -2.2 5,046,259 - +0.0 5,046,278 + -0.2 5,046,438 + Echvi_4214 0.15 +0.3 5,046,438 + Echvi_4214 0.15 +0.5 5,046,438 + Echvi_4214 0.15 +0.5 5,046,438 + Echvi_4214 0.15 +0.8 5,046,438 + Echvi_4214 0.15 +0.1 5,046,439 - Echvi_4214 0.15 -0.4 5,046,439 - Echvi_4214 0.15 +0.5 5,046,439 - Echvi_4214 0.15 -0.2 5,046,439 - Echvi_4214 0.15 -0.5 5,046,439 - Echvi_4214 0.15 +0.5 5,046,465 + Echvi_4214 0.16 +0.2 5,046,466 - Echvi_4214 0.16 +0.0 5,046,516 + Echvi_4214 0.18 -0.3 5,046,516 + Echvi_4214 0.18 -1.2 5,046,592 + Echvi_4214 0.21 -2.1 5,046,593 - Echvi_4214 0.21 -0.2 5,046,593 - Echvi_4214 0.21 -0.5 5,046,602 + Echvi_4214 0.22 +0.3 5,046,602 + Echvi_4214 0.22 +0.8 5,046,603 - Echvi_4214 0.22 +1.4 5,046,664 + Echvi_4214 0.24 -0.2 5,046,668 + Echvi_4214 0.24 -0.5
Or see this region's nucleotide sequence