Experiment: m.b. Dimethyl Sulfoxide 12 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_0864 and Echvi_0865 overlap by 26 nucleotides Echvi_0865 and Echvi_0866 are separated by 404 nucleotides
Echvi_0864: Echvi_0864 - hypothetical protein, at 986,920 to 987,156
_0864
Echvi_0865: Echvi_0865 - RNA polymerase sigma factor, sigma-70 family, at 987,131 to 987,733
_0865
Echvi_0866: Echvi_0866 - hypothetical protein, at 988,138 to 988,773
_0866
Position (kb) 987
988 Strain fitness (log2 ratio) -2
-1
0
1
2
3
4 at 986.217 kb on - strand at 986.217 kb on - strand at 986.285 kb on + strand at 986.334 kb on + strand at 986.367 kb on + strand at 986.367 kb on + strand at 986.444 kb on + strand at 986.445 kb on - strand at 986.445 kb on - strand at 986.487 kb on - strand at 986.487 kb on - strand at 986.487 kb on - strand at 986.492 kb on - strand at 986.500 kb on + strand at 986.546 kb on + strand at 986.546 kb on + strand at 986.546 kb on + strand at 986.549 kb on + strand at 986.551 kb on + strand at 986.551 kb on + strand at 986.551 kb on + strand at 986.551 kb on + strand at 986.551 kb on + strand at 986.553 kb on + strand at 986.553 kb on + strand at 986.583 kb on - strand at 986.603 kb on + strand at 986.603 kb on + strand at 986.604 kb on - strand at 986.604 kb on - strand at 986.624 kb on - strand at 986.624 kb on - strand at 986.624 kb on - strand at 986.624 kb on - strand at 986.630 kb on + strand at 986.630 kb on + strand at 986.630 kb on + strand at 986.631 kb on - strand at 986.634 kb on + strand at 986.635 kb on - strand at 986.696 kb on - strand at 986.704 kb on + strand at 986.704 kb on + strand at 986.755 kb on + strand at 986.755 kb on + strand at 986.755 kb on + strand at 986.755 kb on + strand at 986.763 kb on + strand at 986.764 kb on - strand at 986.814 kb on + strand at 986.814 kb on + strand at 986.815 kb on - strand at 986.819 kb on - strand at 986.819 kb on - strand at 986.819 kb on - strand at 986.830 kb on + strand at 986.831 kb on - strand at 986.898 kb on - strand at 986.904 kb on + strand at 986.997 kb on + strand, within Echvi_0864 at 987.035 kb on + strand, within Echvi_0864 at 987.036 kb on - strand, within Echvi_0864 at 987.111 kb on - strand, within Echvi_0864 at 987.112 kb on + strand, within Echvi_0864 at 987.112 kb on + strand, within Echvi_0864 at 987.112 kb on + strand, within Echvi_0864 at 987.112 kb on + strand, within Echvi_0864 at 987.112 kb on + strand, within Echvi_0864 at 987.112 kb on + strand, within Echvi_0864 at 987.113 kb on - strand, within Echvi_0864 at 987.113 kb on - strand, within Echvi_0864 at 987.113 kb on - strand, within Echvi_0864 at 987.113 kb on - strand, within Echvi_0864 at 987.113 kb on - strand, within Echvi_0864 at 987.113 kb on - strand, within Echvi_0864 at 987.113 kb on - strand, within Echvi_0864 at 987.113 kb on - strand, within Echvi_0864 at 987.113 kb on - strand, within Echvi_0864 at 987.113 kb on - strand, within Echvi_0864 at 987.113 kb on - strand, within Echvi_0864 at 987.113 kb on - strand, within Echvi_0864 at 987.116 kb on + strand, within Echvi_0864 at 987.116 kb on + strand, within Echvi_0864 at 987.116 kb on + strand, within Echvi_0864 at 987.116 kb on + strand, within Echvi_0864 at 987.116 kb on + strand, within Echvi_0864 at 987.116 kb on + strand, within Echvi_0864 at 987.117 kb on - strand, within Echvi_0864 at 987.117 kb on - strand, within Echvi_0864 at 987.117 kb on - strand, within Echvi_0864 at 987.117 kb on - strand, within Echvi_0864 at 987.117 kb on - strand, within Echvi_0864 at 987.117 kb on - strand, within Echvi_0864 at 987.117 kb on - strand, within Echvi_0864 at 987.117 kb on - strand, within Echvi_0864 at 987.121 kb on + strand, within Echvi_0864 at 987.121 kb on + strand, within Echvi_0864 at 987.121 kb on + strand, within Echvi_0864 at 987.122 kb on - strand, within Echvi_0864 at 987.122 kb on - strand, within Echvi_0864 at 987.156 kb on + strand at 987.156 kb on + strand at 987.157 kb on - strand at 987.168 kb on - strand at 987.168 kb on - strand at 987.236 kb on + strand, within Echvi_0865 at 987.236 kb on + strand, within Echvi_0865 at 987.237 kb on - strand, within Echvi_0865 at 987.237 kb on - strand, within Echvi_0865 at 987.237 kb on - strand, within Echvi_0865 at 987.237 kb on - strand, within Echvi_0865 at 987.237 kb on - strand, within Echvi_0865 at 987.237 kb on - strand, within Echvi_0865 at 987.277 kb on + strand, within Echvi_0865 at 987.277 kb on + strand, within Echvi_0865 at 987.277 kb on + strand, within Echvi_0865 at 987.279 kb on + strand, within Echvi_0865 at 987.279 kb on + strand, within Echvi_0865 at 987.279 kb on + strand, within Echvi_0865 at 987.279 kb on + strand, within Echvi_0865 at 987.280 kb on - strand, within Echvi_0865 at 987.280 kb on - strand, within Echvi_0865 at 987.280 kb on - strand, within Echvi_0865 at 987.280 kb on - strand, within Echvi_0865 at 987.328 kb on + strand, within Echvi_0865 at 987.339 kb on - strand, within Echvi_0865 at 987.403 kb on + strand, within Echvi_0865 at 987.403 kb on + strand, within Echvi_0865 at 987.404 kb on - strand, within Echvi_0865 at 987.433 kb on + strand, within Echvi_0865 at 987.465 kb on + strand, within Echvi_0865 at 987.471 kb on - strand, within Echvi_0865 at 987.471 kb on - strand, within Echvi_0865 at 987.527 kb on - strand, within Echvi_0865 at 987.527 kb on - strand, within Echvi_0865 at 987.528 kb on + strand, within Echvi_0865 at 987.554 kb on - strand, within Echvi_0865 at 987.566 kb on + strand, within Echvi_0865 at 987.567 kb on - strand, within Echvi_0865 at 987.605 kb on + strand, within Echvi_0865 at 987.606 kb on - strand, within Echvi_0865 at 987.608 kb on + strand, within Echvi_0865 at 987.608 kb on + strand, within Echvi_0865 at 987.608 kb on + strand, within Echvi_0865 at 987.608 kb on + strand, within Echvi_0865 at 987.609 kb on - strand, within Echvi_0865 at 987.613 kb on + strand, within Echvi_0865 at 987.613 kb on + strand, within Echvi_0865 at 987.613 kb on + strand, within Echvi_0865 at 987.613 kb on + strand, within Echvi_0865 at 987.614 kb on - strand, within Echvi_0865 at 987.614 kb on - strand, within Echvi_0865 at 987.614 kb on - strand, within Echvi_0865 at 987.616 kb on - strand, within Echvi_0865 at 987.616 kb on - strand, within Echvi_0865 at 987.640 kb on + strand, within Echvi_0865 at 987.640 kb on + strand, within Echvi_0865 at 987.640 kb on + strand, within Echvi_0865 at 987.641 kb on - strand at 987.642 kb on + strand, within Echvi_0865 at 987.642 kb on + strand, within Echvi_0865 at 987.643 kb on - strand, within Echvi_0865 at 987.646 kb on + strand, within Echvi_0865 at 987.646 kb on + strand, within Echvi_0865 at 987.646 kb on + strand, within Echvi_0865 at 987.647 kb on - strand, within Echvi_0865 at 987.647 kb on - strand, within Echvi_0865 at 987.647 kb on - strand, within Echvi_0865 at 987.650 kb on + strand, within Echvi_0865 at 987.650 kb on + strand, within Echvi_0865 at 987.651 kb on - strand, within Echvi_0865 at 987.651 kb on - strand, within Echvi_0865 at 987.751 kb on + strand at 987.771 kb on + strand at 987.784 kb on - strand at 987.797 kb on + strand at 987.798 kb on - strand at 988.066 kb on + strand at 988.111 kb on - strand at 988.175 kb on + strand at 988.191 kb on - strand at 988.200 kb on + strand at 988.200 kb on + strand at 988.200 kb on + strand at 988.200 kb on + strand at 988.230 kb on + strand, within Echvi_0866 at 988.232 kb on + strand, within Echvi_0866 at 988.232 kb on + strand, within Echvi_0866 at 988.232 kb on + strand, within Echvi_0866 at 988.239 kb on + strand, within Echvi_0866 at 988.281 kb on + strand, within Echvi_0866 at 988.282 kb on - strand, within Echvi_0866 at 988.289 kb on + strand, within Echvi_0866 at 988.290 kb on - strand, within Echvi_0866 at 988.308 kb on - strand, within Echvi_0866 at 988.362 kb on + strand, within Echvi_0866 at 988.363 kb on - strand, within Echvi_0866 at 988.391 kb on - strand, within Echvi_0866 at 988.406 kb on - strand, within Echvi_0866 at 988.434 kb on + strand, within Echvi_0866 at 988.438 kb on + strand, within Echvi_0866 at 988.451 kb on - strand, within Echvi_0866 at 988.452 kb on + strand, within Echvi_0866 at 988.452 kb on + strand, within Echvi_0866 at 988.453 kb on - strand, within Echvi_0866 at 988.453 kb on - strand, within Echvi_0866 at 988.457 kb on + strand, within Echvi_0866 at 988.457 kb on + strand, within Echvi_0866 at 988.458 kb on - strand, within Echvi_0866 at 988.468 kb on - strand, within Echvi_0866 at 988.537 kb on - strand, within Echvi_0866 at 988.551 kb on - strand, within Echvi_0866 at 988.569 kb on + strand, within Echvi_0866 at 988.569 kb on + strand, within Echvi_0866 at 988.569 kb on + strand, within Echvi_0866 at 988.570 kb on - strand, within Echvi_0866 at 988.570 kb on - strand, within Echvi_0866 at 988.570 kb on - strand, within Echvi_0866 at 988.570 kb on - strand, within Echvi_0866 at 988.570 kb on - strand, within Echvi_0866 at 988.570 kb on - strand, within Echvi_0866 at 988.648 kb on - strand, within Echvi_0866 at 988.687 kb on + strand, within Echvi_0866 at 988.688 kb on - strand, within Echvi_0866 at 988.694 kb on + strand, within Echvi_0866 at 988.694 kb on + strand, within Echvi_0866 at 988.694 kb on + strand, within Echvi_0866 at 988.695 kb on - strand, within Echvi_0866 at 988.695 kb on - strand, within Echvi_0866 at 988.697 kb on - strand, within Echvi_0866 at 988.697 kb on - strand, within Echvi_0866 at 988.704 kb on - strand, within Echvi_0866 at 988.717 kb on + strand at 988.717 kb on + strand at 988.718 kb on - strand at 988.718 kb on - strand at 988.725 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Dimethyl Sulfoxide 12 vol% remove 986,217 - -1.1 986,217 - -0.6 986,285 + +2.0 986,334 + -0.8 986,367 + +2.6 986,367 + -0.5 986,444 + -0.2 986,445 - -0.0 986,445 - +0.4 986,487 - +0.3 986,487 - +0.4 986,487 - -2.2 986,492 - +0.3 986,500 + -0.6 986,546 + +0.9 986,546 + -2.0 986,546 + -0.3 986,549 + +0.2 986,551 + -0.8 986,551 + +0.4 986,551 + -0.1 986,551 + +1.2 986,551 + -0.9 986,553 + +0.4 986,553 + +0.0 986,583 - -1.6 986,603 + -1.4 986,603 + -0.2 986,604 - +0.1 986,604 - -1.6 986,624 - -0.8 986,624 - -0.2 986,624 - -2.5 986,624 - -0.1 986,630 + +0.2 986,630 + -0.0 986,630 + -1.0 986,631 - +1.5 986,634 + -1.5 986,635 - -0.1 986,696 - -0.3 986,704 + +1.0 986,704 + +1.3 986,755 + +0.2 986,755 + -0.4 986,755 + +0.4 986,755 + -2.0 986,763 + -0.8 986,764 - +0.4 986,814 + +0.5 986,814 + -0.6 986,815 - +0.8 986,819 - +1.0 986,819 - -0.4 986,819 - -0.9 986,830 + +0.4 986,831 - -0.6 986,898 - -0.1 986,904 + -1.0 986,997 + Echvi_0864 0.32 +1.8 987,035 + Echvi_0864 0.49 +0.2 987,036 - Echvi_0864 0.49 -1.2 987,111 - Echvi_0864 0.81 -0.4 987,112 + Echvi_0864 0.81 +0.6 987,112 + Echvi_0864 0.81 +0.1 987,112 + Echvi_0864 0.81 -0.1 987,112 + Echvi_0864 0.81 +1.4 987,112 + Echvi_0864 0.81 +1.1 987,112 + Echvi_0864 0.81 -1.2 987,113 - Echvi_0864 0.81 -0.3 987,113 - Echvi_0864 0.81 -2.3 987,113 - Echvi_0864 0.81 -1.2 987,113 - Echvi_0864 0.81 +0.0 987,113 - Echvi_0864 0.81 +0.1 987,113 - Echvi_0864 0.81 +0.0 987,113 - Echvi_0864 0.81 -0.2 987,113 - Echvi_0864 0.81 +0.4 987,113 - Echvi_0864 0.81 -0.8 987,113 - Echvi_0864 0.81 -0.5 987,113 - Echvi_0864 0.81 -2.2 987,113 - Echvi_0864 0.81 -1.2 987,116 + Echvi_0864 0.83 +0.6 987,116 + Echvi_0864 0.83 -0.0 987,116 + Echvi_0864 0.83 +0.2 987,116 + Echvi_0864 0.83 -0.4 987,116 + Echvi_0864 0.83 +0.3 987,116 + Echvi_0864 0.83 -0.4 987,117 - Echvi_0864 0.83 -0.3 987,117 - Echvi_0864 0.83 -0.8 987,117 - Echvi_0864 0.83 -0.8 987,117 - Echvi_0864 0.83 -1.5 987,117 - Echvi_0864 0.83 -0.3 987,117 - Echvi_0864 0.83 -1.0 987,117 - Echvi_0864 0.83 -0.3 987,117 - Echvi_0864 0.83 +0.2 987,121 + Echvi_0864 0.85 -0.2 987,121 + Echvi_0864 0.85 -0.5 987,121 + Echvi_0864 0.85 -1.4 987,122 - Echvi_0864 0.85 -0.8 987,122 - Echvi_0864 0.85 +0.6 987,156 + -0.6 987,156 + +0.1 987,157 - +0.4 987,168 - -0.0 987,168 - +1.0 987,236 + Echvi_0865 0.17 +0.5 987,236 + Echvi_0865 0.17 +0.3 987,237 - Echvi_0865 0.18 +1.0 987,237 - Echvi_0865 0.18 -0.1 987,237 - Echvi_0865 0.18 +1.2 987,237 - Echvi_0865 0.18 +1.2 987,237 - Echvi_0865 0.18 -1.3 987,237 - Echvi_0865 0.18 +1.1 987,277 + Echvi_0865 0.24 +1.4 987,277 + Echvi_0865 0.24 +0.9 987,277 + Echvi_0865 0.24 +2.0 987,279 + Echvi_0865 0.25 -0.6 987,279 + Echvi_0865 0.25 +0.9 987,279 + Echvi_0865 0.25 +0.3 987,279 + Echvi_0865 0.25 +0.3 987,280 - Echvi_0865 0.25 +0.7 987,280 - Echvi_0865 0.25 +0.0 987,280 - Echvi_0865 0.25 -1.2 987,280 - Echvi_0865 0.25 +0.9 987,328 + Echvi_0865 0.33 +0.3 987,339 - Echvi_0865 0.34 +0.6 987,403 + Echvi_0865 0.45 +0.8 987,403 + Echvi_0865 0.45 +1.6 987,404 - Echvi_0865 0.45 +0.8 987,433 + Echvi_0865 0.50 +0.6 987,465 + Echvi_0865 0.55 +0.3 987,471 - Echvi_0865 0.56 +1.0 987,471 - Echvi_0865 0.56 -0.1 987,527 - Echvi_0865 0.66 +0.2 987,527 - Echvi_0865 0.66 +2.3 987,528 + Echvi_0865 0.66 +2.4 987,554 - Echvi_0865 0.70 -1.2 987,566 + Echvi_0865 0.72 +0.3 987,567 - Echvi_0865 0.72 +0.7 987,605 + Echvi_0865 0.79 +0.4 987,606 - Echvi_0865 0.79 +0.6 987,608 + Echvi_0865 0.79 +0.6 987,608 + Echvi_0865 0.79 -0.5 987,608 + Echvi_0865 0.79 -1.2 987,608 + Echvi_0865 0.79 +1.4 987,609 - Echvi_0865 0.79 +0.6 987,613 + Echvi_0865 0.80 -1.2 987,613 + Echvi_0865 0.80 +3.0 987,613 + Echvi_0865 0.80 +1.4 987,613 + Echvi_0865 0.80 +3.3 987,614 - Echvi_0865 0.80 +1.6 987,614 - Echvi_0865 0.80 +3.8 987,614 - Echvi_0865 0.80 +0.3 987,616 - Echvi_0865 0.80 +0.5 987,616 - Echvi_0865 0.80 +0.7 987,640 + Echvi_0865 0.84 +0.7 987,640 + Echvi_0865 0.84 +1.2 987,640 + Echvi_0865 0.84 +0.5 987,641 - +2.4 987,642 + Echvi_0865 0.85 -0.4 987,642 + Echvi_0865 0.85 +0.0 987,643 - Echvi_0865 0.85 +0.7 987,646 + Echvi_0865 0.85 +0.8 987,646 + Echvi_0865 0.85 -1.2 987,646 + Echvi_0865 0.85 +2.0 987,647 - Echvi_0865 0.86 -0.6 987,647 - Echvi_0865 0.86 +0.1 987,647 - Echvi_0865 0.86 -0.5 987,650 + Echvi_0865 0.86 +1.7 987,650 + Echvi_0865 0.86 +1.3 987,651 - Echvi_0865 0.86 +1.1 987,651 - Echvi_0865 0.86 -0.2 987,751 + +0.5 987,771 + +2.5 987,784 - -0.8 987,797 + +3.0 987,798 - -0.6 988,066 + -0.7 988,111 - -0.9 988,175 + -0.2 988,191 - +0.4 988,200 + -0.1 988,200 + +2.0 988,200 + -0.6 988,200 + -0.3 988,230 + Echvi_0866 0.14 +0.1 988,232 + Echvi_0866 0.15 +1.1 988,232 + Echvi_0866 0.15 -0.7 988,232 + Echvi_0866 0.15 +0.7 988,239 + Echvi_0866 0.16 +0.5 988,281 + Echvi_0866 0.22 -2.0 988,282 - Echvi_0866 0.23 +0.7 988,289 + Echvi_0866 0.24 +2.6 988,290 - Echvi_0866 0.24 +0.3 988,308 - Echvi_0866 0.27 +0.6 988,362 + Echvi_0866 0.35 -0.2 988,363 - Echvi_0866 0.35 -1.0 988,391 - Echvi_0866 0.40 -1.8 988,406 - Echvi_0866 0.42 -0.8 988,434 + Echvi_0866 0.47 -0.6 988,438 + Echvi_0866 0.47 -0.2 988,451 - Echvi_0866 0.49 +0.9 988,452 + Echvi_0866 0.49 -0.6 988,452 + Echvi_0866 0.49 +0.9 988,453 - Echvi_0866 0.50 +0.8 988,453 - Echvi_0866 0.50 -0.4 988,457 + Echvi_0866 0.50 +0.9 988,457 + Echvi_0866 0.50 -1.3 988,458 - Echvi_0866 0.50 -1.3 988,468 - Echvi_0866 0.52 +1.3 988,537 - Echvi_0866 0.63 +0.6 988,551 - Echvi_0866 0.65 -0.6 988,569 + Echvi_0866 0.68 +0.0 988,569 + Echvi_0866 0.68 -1.2 988,569 + Echvi_0866 0.68 -0.8 988,570 - Echvi_0866 0.68 +0.0 988,570 - Echvi_0866 0.68 +0.5 988,570 - Echvi_0866 0.68 +0.3 988,570 - Echvi_0866 0.68 +0.1 988,570 - Echvi_0866 0.68 +2.4 988,570 - Echvi_0866 0.68 -0.2 988,648 - Echvi_0866 0.80 +0.0 988,687 + Echvi_0866 0.86 -0.7 988,688 - Echvi_0866 0.86 +0.5 988,694 + Echvi_0866 0.87 +0.4 988,694 + Echvi_0866 0.87 +0.9 988,694 + Echvi_0866 0.87 -0.4 988,695 - Echvi_0866 0.88 -0.3 988,695 - Echvi_0866 0.88 +0.7 988,697 - Echvi_0866 0.88 -1.9 988,697 - Echvi_0866 0.88 +0.1 988,704 - Echvi_0866 0.89 -0.3 988,717 + -0.4 988,717 + +0.4 988,718 - -0.1 988,718 - -1.1 988,725 + +0.6
Or see this region's nucleotide sequence