Experiment: m.b. Dimethyl Sulfoxide 8 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_4653 and Echvi_4654 are separated by 262 nucleotides Echvi_4654 and Echvi_4655 are separated by 483 nucleotides
Echvi_4653: Echvi_4653 - Glutamine phosphoribosylpyrophosphate amidotransferase, at 5,570,042 to 5,571,925
_4653
Echvi_4654: Echvi_4654 - glutamate racemase, at 5,572,188 to 5,572,994
_4654
Echvi_4655: Echvi_4655 - hypothetical protein, at 5,573,478 to 5,573,864
_4655
Position (kb)
5572
5573 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3
4 at 5571.351 kb on - strand, within Echvi_4653 at 5571.755 kb on - strand at 5571.856 kb on + strand at 5571.949 kb on - strand at 5572.204 kb on + strand at 5572.204 kb on + strand at 5572.212 kb on + strand at 5572.219 kb on - strand at 5572.394 kb on - strand, within Echvi_4654 at 5572.404 kb on + strand, within Echvi_4654 at 5572.440 kb on + strand, within Echvi_4654 at 5572.440 kb on + strand, within Echvi_4654 at 5572.441 kb on - strand, within Echvi_4654 at 5572.483 kb on + strand, within Echvi_4654 at 5572.483 kb on + strand, within Echvi_4654 at 5572.484 kb on - strand, within Echvi_4654 at 5572.609 kb on + strand, within Echvi_4654 at 5572.610 kb on - strand, within Echvi_4654 at 5572.677 kb on + strand, within Echvi_4654 at 5572.678 kb on - strand, within Echvi_4654 at 5572.682 kb on - strand, within Echvi_4654 at 5572.682 kb on - strand, within Echvi_4654 at 5572.732 kb on + strand, within Echvi_4654 at 5572.732 kb on + strand, within Echvi_4654 at 5572.732 kb on + strand, within Echvi_4654 at 5572.732 kb on + strand, within Echvi_4654 at 5572.733 kb on - strand, within Echvi_4654 at 5572.733 kb on - strand, within Echvi_4654 at 5572.733 kb on - strand, within Echvi_4654 at 5572.733 kb on - strand, within Echvi_4654 at 5572.733 kb on - strand, within Echvi_4654 at 5572.751 kb on - strand, within Echvi_4654 at 5572.772 kb on + strand, within Echvi_4654 at 5572.773 kb on - strand, within Echvi_4654 at 5572.812 kb on + strand, within Echvi_4654 at 5572.813 kb on - strand, within Echvi_4654 at 5572.834 kb on + strand, within Echvi_4654 at 5572.834 kb on + strand, within Echvi_4654 at 5572.897 kb on - strand, within Echvi_4654 at 5572.955 kb on + strand at 5572.994 kb on + strand at 5572.994 kb on + strand at 5573.008 kb on + strand at 5573.038 kb on + strand at 5573.039 kb on - strand at 5573.039 kb on - strand at 5573.039 kb on - strand at 5573.039 kb on - strand at 5573.058 kb on + strand at 5573.102 kb on + strand at 5573.102 kb on + strand at 5573.103 kb on - strand at 5573.149 kb on + strand at 5573.149 kb on + strand at 5573.150 kb on - strand at 5573.150 kb on - strand at 5573.255 kb on + strand at 5573.294 kb on + strand at 5573.295 kb on - strand at 5573.300 kb on + strand at 5573.325 kb on + strand at 5573.325 kb on + strand at 5573.326 kb on - strand at 5573.326 kb on - strand at 5573.328 kb on - strand at 5573.408 kb on + strand at 5573.408 kb on + strand at 5573.409 kb on - strand at 5573.414 kb on - strand at 5573.414 kb on - strand at 5573.420 kb on + strand at 5573.420 kb on + strand at 5573.421 kb on - strand at 5573.421 kb on - strand at 5573.421 kb on - strand at 5573.421 kb on - strand at 5573.424 kb on + strand at 5573.424 kb on + strand at 5573.424 kb on + strand at 5573.460 kb on - strand at 5573.468 kb on + strand at 5573.468 kb on + strand at 5573.471 kb on + strand at 5573.472 kb on - strand at 5573.472 kb on - strand at 5573.472 kb on - strand at 5573.475 kb on - strand at 5573.475 kb on - strand at 5573.475 kb on - strand at 5573.478 kb on - strand at 5573.499 kb on + strand at 5573.500 kb on - strand at 5573.500 kb on - strand at 5573.500 kb on - strand at 5573.512 kb on + strand at 5573.846 kb on + strand at 5573.847 kb on - strand at 5573.896 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Dimethyl Sulfoxide 8 vol% remove 5,571,351 - Echvi_4653 0.69 -0.2 5,571,755 - +0.0 5,571,856 + -1.5 5,571,949 - -0.1 5,572,204 + -0.2 5,572,204 + +0.1 5,572,212 + -1.2 5,572,219 - +0.2 5,572,394 - Echvi_4654 0.26 -1.4 5,572,404 + Echvi_4654 0.27 +0.2 5,572,440 + Echvi_4654 0.31 -1.6 5,572,440 + Echvi_4654 0.31 +0.2 5,572,441 - Echvi_4654 0.31 +3.8 5,572,483 + Echvi_4654 0.37 -0.1 5,572,483 + Echvi_4654 0.37 +0.2 5,572,484 - Echvi_4654 0.37 -2.3 5,572,609 + Echvi_4654 0.52 -0.0 5,572,610 - Echvi_4654 0.52 +1.7 5,572,677 + Echvi_4654 0.61 -0.9 5,572,678 - Echvi_4654 0.61 +0.5 5,572,682 - Echvi_4654 0.61 -0.3 5,572,682 - Echvi_4654 0.61 -1.2 5,572,732 + Echvi_4654 0.67 +0.2 5,572,732 + Echvi_4654 0.67 -1.2 5,572,732 + Echvi_4654 0.67 +0.8 5,572,732 + Echvi_4654 0.67 -1.2 5,572,733 - Echvi_4654 0.68 -0.3 5,572,733 - Echvi_4654 0.68 -0.1 5,572,733 - Echvi_4654 0.68 -1.8 5,572,733 - Echvi_4654 0.68 -1.9 5,572,733 - Echvi_4654 0.68 -1.0 5,572,751 - Echvi_4654 0.70 -1.8 5,572,772 + Echvi_4654 0.72 -0.5 5,572,773 - Echvi_4654 0.72 -0.0 5,572,812 + Echvi_4654 0.77 -0.1 5,572,813 - Echvi_4654 0.77 -2.1 5,572,834 + Echvi_4654 0.80 +0.5 5,572,834 + Echvi_4654 0.80 -0.2 5,572,897 - Echvi_4654 0.88 -1.7 5,572,955 + +0.1 5,572,994 + +1.6 5,572,994 + -0.3 5,573,008 + -0.1 5,573,038 + +0.1 5,573,039 - +0.7 5,573,039 - -3.5 5,573,039 - -0.7 5,573,039 - -0.6 5,573,058 + -0.8 5,573,102 + -0.5 5,573,102 + +1.0 5,573,103 - -1.4 5,573,149 + -1.2 5,573,149 + +0.2 5,573,150 - +1.2 5,573,150 - +2.6 5,573,255 + +1.5 5,573,294 + +0.8 5,573,295 - -1.0 5,573,300 + -0.5 5,573,325 + -1.6 5,573,325 + +0.6 5,573,326 - +1.2 5,573,326 - +0.5 5,573,328 - +0.5 5,573,408 + -0.4 5,573,408 + +0.8 5,573,409 - -1.0 5,573,414 - -1.9 5,573,414 - +0.8 5,573,420 + +0.6 5,573,420 + -0.2 5,573,421 - +0.8 5,573,421 - -1.0 5,573,421 - +1.5 5,573,421 - -1.2 5,573,424 + +3.2 5,573,424 + +0.3 5,573,424 + +0.8 5,573,460 - -1.6 5,573,468 + +0.3 5,573,468 + +0.7 5,573,471 + +1.1 5,573,472 - -0.5 5,573,472 - -1.2 5,573,472 - +0.1 5,573,475 - +1.6 5,573,475 - -0.1 5,573,475 - -0.2 5,573,478 - +1.2 5,573,499 + -0.9 5,573,500 - +1.8 5,573,500 - +0.6 5,573,500 - +1.4 5,573,512 + +0.2 5,573,846 + -0.5 5,573,847 - -0.5 5,573,896 + +0.1
Or see this region's nucleotide sequence