Experiment: m.b. Dimethyl Sulfoxide 8 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_4610 and Echvi_4611 overlap by 28 nucleotides Echvi_4611 and Echvi_4612 are separated by 78 nucleotides Echvi_4612 and Echvi_4613 are separated by 12 nucleotides
Echvi_4610: Echvi_4610 - 3-oxoacyl-(acyl-carrier-protein) reductase, at 5,519,086 to 5,519,832
_4610
Echvi_4611: Echvi_4611 - hypothetical protein, at 5,519,805 to 5,520,050
_4611
Echvi_4612: Echvi_4612 - Membrane protease subunits, stomatin/prohibitin homologs, at 5,520,129 to 5,520,977
_4612
Echvi_4613: Echvi_4613 - Uncharacterized protein conserved in bacteria, at 5,520,990 to 5,521,169
_4613
Position (kb)
5519
5520
5521 Strain fitness (log2 ratio)
-1
0
1
2 at 5518.818 kb on - strand at 5518.818 kb on - strand at 5518.818 kb on - strand at 5518.834 kb on + strand at 5519.831 kb on - strand at 5519.856 kb on - strand, within Echvi_4611 at 5519.858 kb on - strand, within Echvi_4611 at 5519.967 kb on - strand, within Echvi_4611 at 5519.967 kb on - strand, within Echvi_4611 at 5520.159 kb on + strand at 5520.169 kb on + strand at 5520.211 kb on + strand at 5520.211 kb on + strand at 5520.212 kb on - strand at 5520.227 kb on + strand, within Echvi_4612 at 5520.227 kb on + strand, within Echvi_4612 at 5520.227 kb on + strand, within Echvi_4612 at 5520.227 kb on + strand, within Echvi_4612 at 5520.228 kb on - strand, within Echvi_4612 at 5520.228 kb on - strand, within Echvi_4612 at 5520.228 kb on - strand, within Echvi_4612 at 5520.229 kb on + strand, within Echvi_4612 at 5520.251 kb on - strand, within Echvi_4612 at 5520.307 kb on + strand, within Echvi_4612 at 5520.310 kb on + strand, within Echvi_4612 at 5520.310 kb on + strand, within Echvi_4612 at 5520.310 kb on + strand, within Echvi_4612 at 5520.310 kb on + strand, within Echvi_4612 at 5520.310 kb on + strand, within Echvi_4612 at 5520.327 kb on + strand, within Echvi_4612 at 5520.327 kb on + strand, within Echvi_4612 at 5520.327 kb on + strand, within Echvi_4612 at 5520.328 kb on - strand, within Echvi_4612 at 5520.329 kb on + strand, within Echvi_4612 at 5520.329 kb on + strand, within Echvi_4612 at 5520.329 kb on + strand, within Echvi_4612 at 5520.329 kb on + strand, within Echvi_4612 at 5520.330 kb on - strand, within Echvi_4612 at 5520.330 kb on - strand, within Echvi_4612 at 5520.340 kb on + strand, within Echvi_4612 at 5520.374 kb on + strand, within Echvi_4612 at 5520.375 kb on - strand, within Echvi_4612 at 5520.459 kb on - strand, within Echvi_4612 at 5520.487 kb on + strand, within Echvi_4612 at 5520.498 kb on + strand, within Echvi_4612 at 5520.498 kb on + strand, within Echvi_4612 at 5520.499 kb on - strand, within Echvi_4612 at 5520.517 kb on + strand, within Echvi_4612 at 5520.525 kb on + strand, within Echvi_4612 at 5520.544 kb on + strand, within Echvi_4612 at 5520.582 kb on + strand, within Echvi_4612 at 5520.619 kb on + strand, within Echvi_4612 at 5520.619 kb on + strand, within Echvi_4612 at 5520.620 kb on - strand, within Echvi_4612 at 5520.620 kb on - strand, within Echvi_4612 at 5520.787 kb on + strand, within Echvi_4612 at 5520.958 kb on + strand at 5520.958 kb on + strand at 5520.959 kb on - strand at 5520.959 kb on - strand at 5520.986 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Dimethyl Sulfoxide 8 vol% remove 5,518,818 - -0.5 5,518,818 - +0.1 5,518,818 - +0.5 5,518,834 + +0.3 5,519,831 - -0.2 5,519,856 - Echvi_4611 0.21 -0.5 5,519,858 - Echvi_4611 0.22 -0.8 5,519,967 - Echvi_4611 0.66 +0.3 5,519,967 - Echvi_4611 0.66 +0.8 5,520,159 + +0.1 5,520,169 + +0.2 5,520,211 + +0.5 5,520,211 + +0.4 5,520,212 - -0.4 5,520,227 + Echvi_4612 0.12 +0.1 5,520,227 + Echvi_4612 0.12 +2.4 5,520,227 + Echvi_4612 0.12 -0.8 5,520,227 + Echvi_4612 0.12 -1.2 5,520,228 - Echvi_4612 0.12 +1.4 5,520,228 - Echvi_4612 0.12 +0.1 5,520,228 - Echvi_4612 0.12 +0.6 5,520,229 + Echvi_4612 0.12 -0.2 5,520,251 - Echvi_4612 0.14 +0.3 5,520,307 + Echvi_4612 0.21 +1.8 5,520,310 + Echvi_4612 0.21 +0.6 5,520,310 + Echvi_4612 0.21 -0.2 5,520,310 + Echvi_4612 0.21 -0.5 5,520,310 + Echvi_4612 0.21 +0.5 5,520,310 + Echvi_4612 0.21 +2.2 5,520,327 + Echvi_4612 0.23 +0.8 5,520,327 + Echvi_4612 0.23 -0.1 5,520,327 + Echvi_4612 0.23 +0.8 5,520,328 - Echvi_4612 0.23 -0.5 5,520,329 + Echvi_4612 0.24 +0.4 5,520,329 + Echvi_4612 0.24 -0.3 5,520,329 + Echvi_4612 0.24 -0.3 5,520,329 + Echvi_4612 0.24 -0.6 5,520,330 - Echvi_4612 0.24 +0.6 5,520,330 - Echvi_4612 0.24 +0.9 5,520,340 + Echvi_4612 0.25 -0.5 5,520,374 + Echvi_4612 0.29 +0.7 5,520,375 - Echvi_4612 0.29 -0.5 5,520,459 - Echvi_4612 0.39 -0.6 5,520,487 + Echvi_4612 0.42 +0.0 5,520,498 + Echvi_4612 0.43 +0.1 5,520,498 + Echvi_4612 0.43 +0.1 5,520,499 - Echvi_4612 0.44 -0.2 5,520,517 + Echvi_4612 0.46 +0.2 5,520,525 + Echvi_4612 0.47 -1.5 5,520,544 + Echvi_4612 0.49 +0.8 5,520,582 + Echvi_4612 0.53 -0.2 5,520,619 + Echvi_4612 0.58 -0.4 5,520,619 + Echvi_4612 0.58 +0.1 5,520,620 - Echvi_4612 0.58 +1.1 5,520,620 - Echvi_4612 0.58 +1.1 5,520,787 + Echvi_4612 0.78 -0.7 5,520,958 + +0.6 5,520,958 + -1.0 5,520,959 - -0.2 5,520,959 - +0.2 5,520,986 + +0.2
Or see this region's nucleotide sequence