Experiment: m.b. Dimethyl Sulfoxide 8 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_4556 and Echvi_4557 are separated by 167 nucleotides Echvi_4557 and Echvi_4558 are separated by 12 nucleotides Echvi_4558 and Echvi_4559 are separated by 13 nucleotides
Echvi_4556: Echvi_4556 - hypothetical protein, at 5,454,336 to 5,455,631
_4556
Echvi_4557: Echvi_4557 - Predicted transcriptional regulators, at 5,455,799 to 5,456,383
_4557
Echvi_4558: Echvi_4558 - putative phosphonate catabolism associated alcohol dehydrogenase, at 5,456,396 to 5,457,472
_4558
Echvi_4559: Echvi_4559 - FAD dependent oxidoreductase TIGR03364, at 5,457,486 to 5,458,637
_4559
Position (kb)
5456
5457
5458 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 5455.445 kb on + strand, within Echvi_4556 at 5455.445 kb on + strand, within Echvi_4556 at 5455.445 kb on + strand, within Echvi_4556 at 5455.445 kb on + strand, within Echvi_4556 at 5455.446 kb on - strand, within Echvi_4556 at 5455.447 kb on + strand, within Echvi_4556 at 5455.448 kb on - strand, within Echvi_4556 at 5455.463 kb on + strand, within Echvi_4556 at 5455.538 kb on + strand at 5455.549 kb on + strand at 5455.549 kb on + strand at 5455.550 kb on - strand at 5455.550 kb on - strand at 5455.550 kb on - strand at 5455.581 kb on + strand at 5455.581 kb on + strand at 5455.582 kb on - strand at 5455.590 kb on + strand at 5455.591 kb on - strand at 5455.612 kb on - strand at 5455.620 kb on + strand at 5455.749 kb on + strand at 5455.781 kb on + strand at 5455.799 kb on - strand at 5455.891 kb on + strand, within Echvi_4557 at 5456.066 kb on + strand, within Echvi_4557 at 5456.067 kb on - strand, within Echvi_4557 at 5456.067 kb on - strand, within Echvi_4557 at 5456.069 kb on - strand, within Echvi_4557 at 5456.108 kb on + strand, within Echvi_4557 at 5456.133 kb on + strand, within Echvi_4557 at 5456.133 kb on + strand, within Echvi_4557 at 5456.134 kb on - strand, within Echvi_4557 at 5456.220 kb on + strand, within Echvi_4557 at 5456.220 kb on + strand, within Echvi_4557 at 5456.220 kb on + strand, within Echvi_4557 at 5456.220 kb on + strand, within Echvi_4557 at 5456.221 kb on - strand, within Echvi_4557 at 5456.221 kb on - strand, within Echvi_4557 at 5456.221 kb on - strand, within Echvi_4557 at 5456.221 kb on - strand, within Echvi_4557 at 5456.221 kb on - strand, within Echvi_4557 at 5456.221 kb on - strand, within Echvi_4557 at 5456.222 kb on + strand, within Echvi_4557 at 5456.241 kb on + strand, within Echvi_4557 at 5456.241 kb on + strand, within Echvi_4557 at 5456.242 kb on - strand, within Echvi_4557 at 5456.340 kb on + strand at 5456.341 kb on - strand at 5456.364 kb on - strand at 5456.381 kb on + strand at 5456.381 kb on + strand at 5456.382 kb on - strand at 5456.652 kb on + strand, within Echvi_4558 at 5456.672 kb on - strand, within Echvi_4558 at 5456.684 kb on + strand, within Echvi_4558 at 5456.684 kb on + strand, within Echvi_4558 at 5456.708 kb on - strand, within Echvi_4558 at 5456.747 kb on + strand, within Echvi_4558 at 5456.747 kb on + strand, within Echvi_4558 at 5456.748 kb on - strand, within Echvi_4558 at 5456.748 kb on - strand, within Echvi_4558 at 5456.780 kb on + strand, within Echvi_4558 at 5456.835 kb on + strand, within Echvi_4558 at 5456.836 kb on - strand, within Echvi_4558 at 5456.836 kb on - strand, within Echvi_4558 at 5456.836 kb on - strand, within Echvi_4558 at 5456.840 kb on - strand, within Echvi_4558 at 5456.919 kb on + strand, within Echvi_4558 at 5456.919 kb on + strand, within Echvi_4558 at 5457.231 kb on + strand, within Echvi_4558 at 5457.291 kb on + strand, within Echvi_4558 at 5457.291 kb on + strand, within Echvi_4558 at 5457.292 kb on - strand, within Echvi_4558 at 5457.308 kb on + strand, within Echvi_4558 at 5457.308 kb on + strand, within Echvi_4558 at 5457.308 kb on + strand, within Echvi_4558 at 5457.309 kb on - strand, within Echvi_4558 at 5457.309 kb on - strand, within Echvi_4558 at 5457.310 kb on + strand, within Echvi_4558 at 5457.329 kb on - strand, within Echvi_4558 at 5457.518 kb on - strand at 5457.537 kb on + strand at 5457.537 kb on + strand at 5457.560 kb on + strand at 5457.560 kb on + strand at 5457.575 kb on - strand at 5457.575 kb on - strand at 5457.685 kb on - strand, within Echvi_4559 at 5457.739 kb on - strand, within Echvi_4559 at 5457.771 kb on - strand, within Echvi_4559 at 5457.849 kb on + strand, within Echvi_4559 at 5457.871 kb on - strand, within Echvi_4559 at 5457.875 kb on - strand, within Echvi_4559 at 5457.875 kb on - strand, within Echvi_4559 at 5458.028 kb on - strand, within Echvi_4559 at 5458.101 kb on + strand, within Echvi_4559 at 5458.224 kb on + strand, within Echvi_4559 at 5458.366 kb on - strand, within Echvi_4559
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Dimethyl Sulfoxide 8 vol% remove 5,455,445 + Echvi_4556 0.86 +0.2 5,455,445 + Echvi_4556 0.86 -0.0 5,455,445 + Echvi_4556 0.86 +0.1 5,455,445 + Echvi_4556 0.86 -0.3 5,455,446 - Echvi_4556 0.86 +0.5 5,455,447 + Echvi_4556 0.86 +0.0 5,455,448 - Echvi_4556 0.86 -0.7 5,455,463 + Echvi_4556 0.87 +0.6 5,455,538 + +0.6 5,455,549 + +0.9 5,455,549 + +0.6 5,455,550 - -1.0 5,455,550 - -0.8 5,455,550 - +0.2 5,455,581 + +2.3 5,455,581 + +0.2 5,455,582 - +0.2 5,455,590 + +1.0 5,455,591 - +0.6 5,455,612 - -0.3 5,455,620 + -1.2 5,455,749 + -0.4 5,455,781 + -0.8 5,455,799 - +0.4 5,455,891 + Echvi_4557 0.16 +0.2 5,456,066 + Echvi_4557 0.46 +0.2 5,456,067 - Echvi_4557 0.46 +0.7 5,456,067 - Echvi_4557 0.46 -0.7 5,456,069 - Echvi_4557 0.46 -0.5 5,456,108 + Echvi_4557 0.53 +0.1 5,456,133 + Echvi_4557 0.57 +0.2 5,456,133 + Echvi_4557 0.57 -0.1 5,456,134 - Echvi_4557 0.57 -0.6 5,456,220 + Echvi_4557 0.72 -0.1 5,456,220 + Echvi_4557 0.72 -0.2 5,456,220 + Echvi_4557 0.72 +1.5 5,456,220 + Echvi_4557 0.72 -0.6 5,456,221 - Echvi_4557 0.72 +1.0 5,456,221 - Echvi_4557 0.72 +0.8 5,456,221 - Echvi_4557 0.72 -2.9 5,456,221 - Echvi_4557 0.72 +0.4 5,456,221 - Echvi_4557 0.72 +0.0 5,456,221 - Echvi_4557 0.72 -0.1 5,456,222 + Echvi_4557 0.72 +0.4 5,456,241 + Echvi_4557 0.76 +0.0 5,456,241 + Echvi_4557 0.76 -0.6 5,456,242 - Echvi_4557 0.76 -0.2 5,456,340 + +0.6 5,456,341 - -0.8 5,456,364 - -0.9 5,456,381 + -0.1 5,456,381 + +0.1 5,456,382 - +2.1 5,456,652 + Echvi_4558 0.24 +0.2 5,456,672 - Echvi_4558 0.26 -0.3 5,456,684 + Echvi_4558 0.27 +0.2 5,456,684 + Echvi_4558 0.27 +2.8 5,456,708 - Echvi_4558 0.29 +0.2 5,456,747 + Echvi_4558 0.33 -0.2 5,456,747 + Echvi_4558 0.33 +0.2 5,456,748 - Echvi_4558 0.33 +1.0 5,456,748 - Echvi_4558 0.33 +0.0 5,456,780 + Echvi_4558 0.36 -0.8 5,456,835 + Echvi_4558 0.41 +1.8 5,456,836 - Echvi_4558 0.41 +1.2 5,456,836 - Echvi_4558 0.41 +0.6 5,456,836 - Echvi_4558 0.41 +0.7 5,456,840 - Echvi_4558 0.41 +1.2 5,456,919 + Echvi_4558 0.49 +0.6 5,456,919 + Echvi_4558 0.49 +1.0 5,457,231 + Echvi_4558 0.78 +1.5 5,457,291 + Echvi_4558 0.83 +1.2 5,457,291 + Echvi_4558 0.83 +0.4 5,457,292 - Echvi_4558 0.83 -0.8 5,457,308 + Echvi_4558 0.85 -0.1 5,457,308 + Echvi_4558 0.85 +2.2 5,457,308 + Echvi_4558 0.85 -0.9 5,457,309 - Echvi_4558 0.85 +0.8 5,457,309 - Echvi_4558 0.85 +0.2 5,457,310 + Echvi_4558 0.85 +1.2 5,457,329 - Echvi_4558 0.87 +1.2 5,457,518 - -0.7 5,457,537 + +0.2 5,457,537 + +0.3 5,457,560 + -0.2 5,457,560 + +0.1 5,457,575 - +0.0 5,457,575 - +0.3 5,457,685 - Echvi_4559 0.17 -0.3 5,457,739 - Echvi_4559 0.22 +0.4 5,457,771 - Echvi_4559 0.25 -1.8 5,457,849 + Echvi_4559 0.32 -0.5 5,457,871 - Echvi_4559 0.33 +0.3 5,457,875 - Echvi_4559 0.34 -1.3 5,457,875 - Echvi_4559 0.34 +1.8 5,458,028 - Echvi_4559 0.47 -0.9 5,458,101 + Echvi_4559 0.53 +0.4 5,458,224 + Echvi_4559 0.64 +0.3 5,458,366 - Echvi_4559 0.76 -0.6
Or see this region's nucleotide sequence