Experiment: m.b. Dimethyl Sulfoxide 8 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_4465 and Echvi_4466 are separated by 57 nucleotides Echvi_4466 and Echvi_4467 are separated by 50 nucleotides Echvi_4467 and Echvi_4468 are separated by 135 nucleotides
Echvi_4465: Echvi_4465 - hypothetical protein, at 5,340,547 to 5,340,909
_4465
Echvi_4466: Echvi_4466 - Co/Zn/Cd efflux system component, at 5,340,967 to 5,341,764
_4466
Echvi_4467: Echvi_4467 - Uncharacterized conserved protein, at 5,341,815 to 5,342,201
_4467
Echvi_4468: Echvi_4468 - heavy metal translocating P-type ATPase, at 5,342,337 to 5,344,838
_4468
Position (kb)
5341
5342
5343 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 5340.850 kb on - strand, within Echvi_4465 at 5340.915 kb on + strand at 5340.922 kb on + strand at 5340.943 kb on + strand at 5340.943 kb on + strand at 5340.947 kb on + strand at 5340.948 kb on - strand at 5340.950 kb on + strand at 5340.950 kb on + strand at 5340.950 kb on + strand at 5340.950 kb on + strand at 5340.950 kb on + strand at 5340.952 kb on + strand at 5340.952 kb on + strand at 5340.989 kb on - strand at 5340.995 kb on - strand at 5341.068 kb on - strand, within Echvi_4466 at 5341.068 kb on - strand, within Echvi_4466 at 5341.102 kb on + strand, within Echvi_4466 at 5341.102 kb on + strand, within Echvi_4466 at 5341.106 kb on - strand, within Echvi_4466 at 5341.106 kb on - strand, within Echvi_4466 at 5341.270 kb on + strand, within Echvi_4466 at 5341.271 kb on - strand, within Echvi_4466 at 5341.388 kb on - strand, within Echvi_4466 at 5341.404 kb on + strand, within Echvi_4466 at 5341.405 kb on - strand, within Echvi_4466 at 5341.431 kb on + strand, within Echvi_4466 at 5341.462 kb on + strand, within Echvi_4466 at 5341.462 kb on + strand, within Echvi_4466 at 5341.521 kb on + strand, within Echvi_4466 at 5341.530 kb on + strand, within Echvi_4466 at 5341.531 kb on - strand, within Echvi_4466 at 5341.531 kb on - strand, within Echvi_4466 at 5341.533 kb on + strand, within Echvi_4466 at 5341.533 kb on + strand, within Echvi_4466 at 5341.534 kb on - strand, within Echvi_4466 at 5341.540 kb on + strand, within Echvi_4466 at 5341.541 kb on - strand, within Echvi_4466 at 5341.541 kb on - strand, within Echvi_4466 at 5341.594 kb on + strand, within Echvi_4466 at 5341.597 kb on - strand, within Echvi_4466 at 5341.631 kb on + strand, within Echvi_4466 at 5341.631 kb on + strand, within Echvi_4466 at 5341.631 kb on + strand, within Echvi_4466 at 5341.631 kb on + strand, within Echvi_4466 at 5341.651 kb on - strand, within Echvi_4466 at 5341.651 kb on - strand, within Echvi_4466 at 5341.683 kb on + strand, within Echvi_4466 at 5341.767 kb on + strand at 5341.768 kb on - strand at 5341.803 kb on - strand at 5341.819 kb on - strand at 5341.880 kb on + strand, within Echvi_4467 at 5341.881 kb on - strand, within Echvi_4467 at 5341.898 kb on + strand, within Echvi_4467 at 5341.898 kb on + strand, within Echvi_4467 at 5341.898 kb on + strand, within Echvi_4467 at 5341.899 kb on - strand, within Echvi_4467 at 5341.924 kb on - strand, within Echvi_4467 at 5341.924 kb on - strand, within Echvi_4467 at 5341.956 kb on + strand, within Echvi_4467 at 5341.956 kb on + strand, within Echvi_4467 at 5341.956 kb on + strand, within Echvi_4467 at 5341.956 kb on + strand, within Echvi_4467 at 5341.957 kb on - strand, within Echvi_4467 at 5341.986 kb on - strand, within Echvi_4467 at 5342.024 kb on + strand, within Echvi_4467 at 5342.024 kb on + strand, within Echvi_4467 at 5342.024 kb on + strand, within Echvi_4467 at 5342.024 kb on + strand, within Echvi_4467 at 5342.089 kb on - strand, within Echvi_4467 at 5342.102 kb on + strand, within Echvi_4467 at 5342.168 kb on + strand at 5342.169 kb on - strand at 5342.194 kb on + strand at 5342.194 kb on + strand at 5342.194 kb on + strand at 5342.195 kb on - strand at 5342.195 kb on - strand at 5342.235 kb on + strand at 5342.238 kb on - strand at 5342.238 kb on - strand at 5342.266 kb on + strand at 5342.267 kb on - strand at 5342.272 kb on + strand at 5342.314 kb on + strand at 5342.314 kb on + strand at 5342.314 kb on + strand at 5342.347 kb on + strand at 5342.373 kb on + strand at 5342.374 kb on - strand at 5342.376 kb on + strand at 5342.376 kb on + strand at 5342.377 kb on - strand at 5342.380 kb on - strand at 5342.388 kb on - strand at 5342.406 kb on + strand at 5342.418 kb on + strand at 5342.430 kb on - strand at 5342.456 kb on + strand at 5342.475 kb on + strand at 5342.499 kb on - strand at 5342.504 kb on + strand at 5342.624 kb on + strand, within Echvi_4468 at 5342.624 kb on + strand, within Echvi_4468 at 5342.627 kb on + strand, within Echvi_4468 at 5342.652 kb on + strand, within Echvi_4468 at 5342.652 kb on + strand, within Echvi_4468 at 5342.813 kb on + strand, within Echvi_4468 at 5342.855 kb on + strand, within Echvi_4468 at 5342.900 kb on - strand, within Echvi_4468 at 5342.931 kb on - strand, within Echvi_4468 at 5342.984 kb on + strand, within Echvi_4468 at 5342.984 kb on + strand, within Echvi_4468 at 5342.984 kb on + strand, within Echvi_4468 at 5343.025 kb on + strand, within Echvi_4468 at 5343.025 kb on + strand, within Echvi_4468 at 5343.025 kb on + strand, within Echvi_4468 at 5343.026 kb on - strand, within Echvi_4468 at 5343.028 kb on - strand, within Echvi_4468 at 5343.028 kb on - strand, within Echvi_4468 at 5343.047 kb on + strand, within Echvi_4468 at 5343.053 kb on + strand, within Echvi_4468 at 5343.053 kb on + strand, within Echvi_4468 at 5343.062 kb on + strand, within Echvi_4468 at 5343.177 kb on + strand, within Echvi_4468 at 5343.177 kb on + strand, within Echvi_4468 at 5343.177 kb on + strand, within Echvi_4468
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Dimethyl Sulfoxide 8 vol% remove 5,340,850 - Echvi_4465 0.83 +0.6 5,340,915 + +1.0 5,340,922 + +0.2 5,340,943 + +0.2 5,340,943 + +0.2 5,340,947 + +1.1 5,340,948 - +1.5 5,340,950 + -2.1 5,340,950 + +0.3 5,340,950 + +0.0 5,340,950 + -0.4 5,340,950 + +0.5 5,340,952 + -1.7 5,340,952 + +0.3 5,340,989 - -1.6 5,340,995 - +0.7 5,341,068 - Echvi_4466 0.13 +0.3 5,341,068 - Echvi_4466 0.13 -1.3 5,341,102 + Echvi_4466 0.17 -1.5 5,341,102 + Echvi_4466 0.17 +0.8 5,341,106 - Echvi_4466 0.17 -0.5 5,341,106 - Echvi_4466 0.17 +0.6 5,341,270 + Echvi_4466 0.38 -0.3 5,341,271 - Echvi_4466 0.38 +0.1 5,341,388 - Echvi_4466 0.53 +0.5 5,341,404 + Echvi_4466 0.55 +0.4 5,341,405 - Echvi_4466 0.55 +0.0 5,341,431 + Echvi_4466 0.58 -0.5 5,341,462 + Echvi_4466 0.62 +0.6 5,341,462 + Echvi_4466 0.62 +0.4 5,341,521 + Echvi_4466 0.69 +0.6 5,341,530 + Echvi_4466 0.71 -0.1 5,341,531 - Echvi_4466 0.71 -1.3 5,341,531 - Echvi_4466 0.71 -1.4 5,341,533 + Echvi_4466 0.71 +1.5 5,341,533 + Echvi_4466 0.71 -0.1 5,341,534 - Echvi_4466 0.71 -1.2 5,341,540 + Echvi_4466 0.72 +0.4 5,341,541 - Echvi_4466 0.72 +1.2 5,341,541 - Echvi_4466 0.72 -1.1 5,341,594 + Echvi_4466 0.79 -0.9 5,341,597 - Echvi_4466 0.79 +0.8 5,341,631 + Echvi_4466 0.83 -0.2 5,341,631 + Echvi_4466 0.83 -0.3 5,341,631 + Echvi_4466 0.83 -0.1 5,341,631 + Echvi_4466 0.83 -0.2 5,341,651 - Echvi_4466 0.86 -0.3 5,341,651 - Echvi_4466 0.86 -2.4 5,341,683 + Echvi_4466 0.90 +0.1 5,341,767 + -0.2 5,341,768 - -0.8 5,341,803 - -1.0 5,341,819 - -1.5 5,341,880 + Echvi_4467 0.17 +0.7 5,341,881 - Echvi_4467 0.17 -0.1 5,341,898 + Echvi_4467 0.21 -0.7 5,341,898 + Echvi_4467 0.21 -0.2 5,341,898 + Echvi_4467 0.21 -0.2 5,341,899 - Echvi_4467 0.22 -1.6 5,341,924 - Echvi_4467 0.28 -1.0 5,341,924 - Echvi_4467 0.28 -1.7 5,341,956 + Echvi_4467 0.36 -0.9 5,341,956 + Echvi_4467 0.36 -0.1 5,341,956 + Echvi_4467 0.36 +0.1 5,341,956 + Echvi_4467 0.36 -0.6 5,341,957 - Echvi_4467 0.37 -0.8 5,341,986 - Echvi_4467 0.44 -2.4 5,342,024 + Echvi_4467 0.54 -0.3 5,342,024 + Echvi_4467 0.54 +0.2 5,342,024 + Echvi_4467 0.54 -1.1 5,342,024 + Echvi_4467 0.54 -0.3 5,342,089 - Echvi_4467 0.71 -1.6 5,342,102 + Echvi_4467 0.74 +0.2 5,342,168 + -0.6 5,342,169 - -0.2 5,342,194 + -0.4 5,342,194 + -0.3 5,342,194 + -0.6 5,342,195 - -0.7 5,342,195 - -0.6 5,342,235 + -1.0 5,342,238 - +0.3 5,342,238 - -0.9 5,342,266 + +0.5 5,342,267 - +0.0 5,342,272 + +0.9 5,342,314 + -0.2 5,342,314 + -1.5 5,342,314 + -0.1 5,342,347 + -0.4 5,342,373 + -0.8 5,342,374 - +0.0 5,342,376 + -2.1 5,342,376 + -0.8 5,342,377 - -0.1 5,342,380 - -0.7 5,342,388 - +1.1 5,342,406 + -1.3 5,342,418 + -0.2 5,342,430 - -1.2 5,342,456 + -1.3 5,342,475 + -0.8 5,342,499 - +0.2 5,342,504 + +1.8 5,342,624 + Echvi_4468 0.11 -1.0 5,342,624 + Echvi_4468 0.11 -0.9 5,342,627 + Echvi_4468 0.12 -1.5 5,342,652 + Echvi_4468 0.13 +0.8 5,342,652 + Echvi_4468 0.13 +0.2 5,342,813 + Echvi_4468 0.19 -0.8 5,342,855 + Echvi_4468 0.21 +0.3 5,342,900 - Echvi_4468 0.23 -1.2 5,342,931 - Echvi_4468 0.24 +0.2 5,342,984 + Echvi_4468 0.26 -1.5 5,342,984 + Echvi_4468 0.26 +0.0 5,342,984 + Echvi_4468 0.26 -1.5 5,343,025 + Echvi_4468 0.27 +0.6 5,343,025 + Echvi_4468 0.27 +1.0 5,343,025 + Echvi_4468 0.27 -0.4 5,343,026 - Echvi_4468 0.28 -2.3 5,343,028 - Echvi_4468 0.28 -1.1 5,343,028 - Echvi_4468 0.28 +0.9 5,343,047 + Echvi_4468 0.28 +0.4 5,343,053 + Echvi_4468 0.29 -0.1 5,343,053 + Echvi_4468 0.29 -0.5 5,343,062 + Echvi_4468 0.29 +0.4 5,343,177 + Echvi_4468 0.34 -2.1 5,343,177 + Echvi_4468 0.34 -1.8 5,343,177 + Echvi_4468 0.34 +0.6
Or see this region's nucleotide sequence