Experiment: m-Inositol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Atu6111 and Atu6112 are separated by 361 nucleotides Atu6112 and Atu6113 are separated by 91 nucleotides Atu6113 and Atu6114 are separated by 13 nucleotides
Atu6111: Atu6111 - conserved hypothetical protein, at 132,286 to 133,200
Atu6111
Atu6112: Atu6112 - conserved hypothetical protein, at 133,562 to 134,212
Atu6112
Atu6113: Atu6113 - conserved hypothetical protein, at 134,304 to 134,882
Atu6113
Atu6114: Atu6114 - hypothetical protein, at 134,896 to 135,138
Atu6114
Position (kb) 133
134
135 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 132.623 kb on + strand, within Atu6111 at 132.672 kb on - strand, within Atu6111 at 132.698 kb on - strand, within Atu6111 at 132.698 kb on - strand, within Atu6111 at 132.731 kb on - strand, within Atu6111 at 132.738 kb on + strand, within Atu6111 at 132.858 kb on + strand, within Atu6111 at 132.877 kb on - strand, within Atu6111 at 132.920 kb on - strand, within Atu6111 at 132.920 kb on - strand, within Atu6111 at 132.977 kb on - strand, within Atu6111 at 133.044 kb on + strand, within Atu6111 at 133.047 kb on - strand, within Atu6111 at 133.057 kb on - strand, within Atu6111 at 133.120 kb on - strand at 133.125 kb on - strand at 133.209 kb on + strand at 133.284 kb on + strand at 133.323 kb on + strand at 133.393 kb on - strand at 133.407 kb on + strand at 133.514 kb on + strand at 133.527 kb on + strand at 133.527 kb on + strand at 133.559 kb on + strand at 133.596 kb on - strand at 133.650 kb on + strand, within Atu6112 at 133.673 kb on - strand, within Atu6112 at 133.704 kb on - strand, within Atu6112 at 133.829 kb on + strand, within Atu6112 at 133.830 kb on + strand, within Atu6112 at 134.068 kb on - strand, within Atu6112 at 134.124 kb on + strand, within Atu6112 at 134.145 kb on - strand, within Atu6112 at 134.154 kb on - strand at 134.215 kb on + strand at 134.223 kb on - strand at 134.223 kb on - strand at 134.246 kb on - strand at 134.348 kb on + strand at 134.362 kb on + strand, within Atu6113 at 134.365 kb on - strand, within Atu6113 at 134.365 kb on - strand, within Atu6113 at 134.365 kb on - strand, within Atu6113 at 134.434 kb on + strand, within Atu6113 at 134.442 kb on - strand, within Atu6113 at 134.515 kb on + strand, within Atu6113 at 134.566 kb on - strand, within Atu6113 at 134.566 kb on - strand, within Atu6113 at 134.576 kb on - strand, within Atu6113 at 134.751 kb on + strand, within Atu6113 at 134.754 kb on - strand, within Atu6113 at 134.847 kb on + strand at 134.852 kb on + strand at 134.983 kb on + strand, within Atu6114 at 135.030 kb on - strand, within Atu6114 at 135.093 kb on + strand, within Atu6114 at 135.165 kb on - strand at 135.171 kb on + strand at 135.171 kb on + strand at 135.179 kb on - strand at 135.179 kb on - strand at 135.185 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m-Inositol (C) remove 132,623 + Atu6111 0.37 +0.2 132,672 - Atu6111 0.42 -0.2 132,698 - Atu6111 0.45 -0.1 132,698 - Atu6111 0.45 -0.8 132,731 - Atu6111 0.49 -0.1 132,738 + Atu6111 0.49 +1.4 132,858 + Atu6111 0.63 -1.0 132,877 - Atu6111 0.65 +0.2 132,920 - Atu6111 0.69 +0.2 132,920 - Atu6111 0.69 +2.4 132,977 - Atu6111 0.76 +0.1 133,044 + Atu6111 0.83 -0.1 133,047 - Atu6111 0.83 +1.8 133,057 - Atu6111 0.84 -2.4 133,120 - -0.3 133,125 - +1.1 133,209 + +1.1 133,284 + +0.3 133,323 + +3.4 133,393 - -0.5 133,407 + -1.6 133,514 + -0.4 133,527 + -0.1 133,527 + +0.6 133,559 + +1.6 133,596 - +1.0 133,650 + Atu6112 0.14 -0.4 133,673 - Atu6112 0.17 +0.8 133,704 - Atu6112 0.22 -0.7 133,829 + Atu6112 0.41 +1.4 133,830 + Atu6112 0.41 +0.6 134,068 - Atu6112 0.78 -0.4 134,124 + Atu6112 0.86 -0.0 134,145 - Atu6112 0.90 -0.8 134,154 - +1.2 134,215 + +0.1 134,223 - +0.1 134,223 - +0.1 134,246 - -1.3 134,348 + -0.1 134,362 + Atu6113 0.10 +0.4 134,365 - Atu6113 0.11 +0.6 134,365 - Atu6113 0.11 +0.5 134,365 - Atu6113 0.11 +0.1 134,434 + Atu6113 0.22 +0.8 134,442 - Atu6113 0.24 +0.3 134,515 + Atu6113 0.36 +0.1 134,566 - Atu6113 0.45 -0.8 134,566 - Atu6113 0.45 +0.8 134,576 - Atu6113 0.47 +1.5 134,751 + Atu6113 0.77 +1.2 134,754 - Atu6113 0.78 +0.6 134,847 + +0.2 134,852 + +0.6 134,983 + Atu6114 0.36 -1.2 135,030 - Atu6114 0.55 -1.2 135,093 + Atu6114 0.81 -2.1 135,165 - -0.1 135,171 + -0.5 135,171 + -0.2 135,179 - -0.2 135,179 - -1.1 135,185 + -0.2
Or see this region's nucleotide sequence