Experiment: m-Inositol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Atu0406 and Atu0407 are separated by 153 nucleotides Atu0407 and Atu0408 are separated by 72 nucleotides
Atu0406: Atu0406 - ABC transporter, nucleotide binding/ATPase protein, at 402,258 to 403,307
Atu0406
Atu0407: Atu0407 - ABC transporter, substrate binding protein (iron), at 403,461 to 404,477
Atu0407
Atu0408: Atu0408 - ABC transporter, membrane spanning protein, at 404,550 to 406,226
Atu0408
Position (kb) 403
404
405 Strain fitness (log2 ratio) -1
0
1
2 at 402.495 kb on + strand, within Atu0406 at 402.561 kb on + strand, within Atu0406 at 402.587 kb on + strand, within Atu0406 at 402.684 kb on + strand, within Atu0406 at 402.728 kb on - strand, within Atu0406 at 402.745 kb on - strand, within Atu0406 at 402.759 kb on + strand, within Atu0406 at 402.888 kb on - strand, within Atu0406 at 402.909 kb on + strand, within Atu0406 at 402.917 kb on - strand, within Atu0406 at 402.917 kb on - strand, within Atu0406 at 402.933 kb on + strand, within Atu0406 at 402.989 kb on + strand, within Atu0406 at 402.998 kb on - strand, within Atu0406 at 403.202 kb on - strand, within Atu0406 at 403.223 kb on + strand at 403.252 kb on + strand at 403.261 kb on - strand at 403.442 kb on + strand at 403.589 kb on - strand, within Atu0407 at 403.683 kb on - strand, within Atu0407 at 403.766 kb on + strand, within Atu0407 at 403.766 kb on + strand, within Atu0407 at 403.771 kb on + strand, within Atu0407 at 403.774 kb on - strand, within Atu0407 at 403.774 kb on - strand, within Atu0407 at 403.774 kb on - strand, within Atu0407 at 403.795 kb on + strand, within Atu0407 at 403.828 kb on - strand, within Atu0407 at 403.921 kb on - strand, within Atu0407 at 403.940 kb on + strand, within Atu0407 at 403.946 kb on - strand, within Atu0407 at 403.948 kb on - strand, within Atu0407 at 403.964 kb on + strand, within Atu0407 at 404.018 kb on + strand, within Atu0407 at 404.026 kb on - strand, within Atu0407 at 404.070 kb on + strand, within Atu0407 at 404.105 kb on + strand, within Atu0407 at 404.156 kb on - strand, within Atu0407 at 404.161 kb on - strand, within Atu0407 at 404.213 kb on + strand, within Atu0407 at 404.301 kb on + strand, within Atu0407 at 404.309 kb on - strand, within Atu0407 at 404.338 kb on + strand, within Atu0407 at 404.438 kb on + strand at 404.497 kb on + strand at 404.592 kb on + strand at 404.685 kb on + strand at 404.690 kb on - strand at 404.693 kb on - strand at 404.693 kb on - strand at 404.793 kb on + strand, within Atu0408 at 404.855 kb on - strand, within Atu0408 at 404.895 kb on - strand, within Atu0408 at 405.006 kb on - strand, within Atu0408 at 405.019 kb on + strand, within Atu0408 at 405.027 kb on - strand, within Atu0408 at 405.035 kb on - strand, within Atu0408 at 405.054 kb on + strand, within Atu0408 at 405.196 kb on + strand, within Atu0408 at 405.206 kb on + strand, within Atu0408 at 405.320 kb on - strand, within Atu0408 at 405.343 kb on - strand, within Atu0408 at 405.441 kb on + strand, within Atu0408 at 405.442 kb on + strand, within Atu0408 at 405.460 kb on + strand, within Atu0408
Per-strain Table
Position Strand Gene LocusTag Fraction m-Inositol (C) remove 402,495 + Atu0406 0.23 +0.0 402,561 + Atu0406 0.29 +0.0 402,587 + Atu0406 0.31 -1.6 402,684 + Atu0406 0.41 +0.2 402,728 - Atu0406 0.45 -0.2 402,745 - Atu0406 0.46 +0.1 402,759 + Atu0406 0.48 -0.5 402,888 - Atu0406 0.60 -0.3 402,909 + Atu0406 0.62 -0.6 402,917 - Atu0406 0.63 +0.5 402,917 - Atu0406 0.63 +0.2 402,933 + Atu0406 0.64 +1.0 402,989 + Atu0406 0.70 +0.1 402,998 - Atu0406 0.70 -0.2 403,202 - Atu0406 0.90 +0.3 403,223 + +0.4 403,252 + +0.0 403,261 - -0.2 403,442 + +0.4 403,589 - Atu0407 0.13 -0.0 403,683 - Atu0407 0.22 +0.1 403,766 + Atu0407 0.30 +0.4 403,766 + Atu0407 0.30 -0.5 403,771 + Atu0407 0.30 -0.1 403,774 - Atu0407 0.31 -0.2 403,774 - Atu0407 0.31 -0.6 403,774 - Atu0407 0.31 -0.4 403,795 + Atu0407 0.33 -0.2 403,828 - Atu0407 0.36 +0.4 403,921 - Atu0407 0.45 +0.2 403,940 + Atu0407 0.47 +0.4 403,946 - Atu0407 0.48 -0.3 403,948 - Atu0407 0.48 +0.0 403,964 + Atu0407 0.49 +0.2 404,018 + Atu0407 0.55 -1.1 404,026 - Atu0407 0.56 -0.1 404,070 + Atu0407 0.60 +0.4 404,105 + Atu0407 0.63 +0.1 404,156 - Atu0407 0.68 -0.1 404,161 - Atu0407 0.69 +2.1 404,213 + Atu0407 0.74 +0.0 404,301 + Atu0407 0.83 -0.1 404,309 - Atu0407 0.83 +2.0 404,338 + Atu0407 0.86 +0.2 404,438 + +0.9 404,497 + -0.1 404,592 + +0.9 404,685 + -0.1 404,690 - +0.4 404,693 - +0.7 404,693 - +0.1 404,793 + Atu0408 0.14 +0.1 404,855 - Atu0408 0.18 -0.3 404,895 - Atu0408 0.21 +0.3 405,006 - Atu0408 0.27 +0.2 405,019 + Atu0408 0.28 +0.1 405,027 - Atu0408 0.28 +0.0 405,035 - Atu0408 0.29 +1.8 405,054 + Atu0408 0.30 +0.5 405,196 + Atu0408 0.39 +0.2 405,206 + Atu0408 0.39 -0.8 405,320 - Atu0408 0.46 -0.5 405,343 - Atu0408 0.47 -0.2 405,441 + Atu0408 0.53 +0.1 405,442 + Atu0408 0.53 -0.5 405,460 + Atu0408 0.54 +0.6
Or see this region's nucleotide sequence