Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_3791

Experiment: m.b. Fusidic 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Fusidic 0.003 mg/ml
4,522,601	+				-0.1
4,522,675	+				-0.3
4,522,675	+				-1.7
4,522,759	-				-1.6
4,522,770	+				-0.5
4,522,770	+				-2.0
4,522,830	+				-1.3
4,522,830	+				-1.2
4,522,830	+				+0.1
4,522,831	-				-0.2
4,522,865	-		Echvi_3790	0.12	+0.5
4,522,887	+		Echvi_3790	0.15	+0.4
4,522,950	+		Echvi_3790	0.23	+0.7
4,522,950	+		Echvi_3790	0.23	-0.8
4,522,951	-		Echvi_3790	0.24	+1.8
4,522,951	-		Echvi_3790	0.24	+1.1
4,522,951	-		Echvi_3790	0.24	+0.4
4,522,955	+		Echvi_3790	0.24	+0.7
4,522,956	-		Echvi_3790	0.24	-0.1
4,522,956	-		Echvi_3790	0.24	+1.4
4,523,051	-		Echvi_3790	0.37	+0.3
4,523,056	+		Echvi_3790	0.37	+0.5
4,523,067	+		Echvi_3790	0.39	-0.3
4,523,068	-		Echvi_3790	0.39	-0.3
4,523,128	-		Echvi_3790	0.47	-0.1
4,523,139	+		Echvi_3790	0.48	+1.0
4,523,267	+		Echvi_3790	0.65	+0.8
4,523,402	-		Echvi_3790	0.82	-0.4
4,523,407	-		Echvi_3790	0.83	-1.5
4,523,407	-		Echvi_3790	0.83	-1.2
4,523,410	+		Echvi_3790	0.83	+0.6
4,523,410	+		Echvi_3790	0.83	+0.6
4,523,410	+		Echvi_3790	0.83	-0.7
4,523,411	-		Echvi_3790	0.83	+0.1
4,523,411	-		Echvi_3790	0.83	-0.5
4,523,411	-		Echvi_3790	0.83	+0.9
4,523,412	+		Echvi_3790	0.83	-0.4
4,523,413	-		Echvi_3790	0.84	+0.5
4,523,413	-		Echvi_3790	0.84	-0.2
4,523,413	-		Echvi_3790	0.84	+0.1
4,523,435	+		Echvi_3790	0.86	-0.7
4,523,436	-		Echvi_3790	0.87	+0.0
4,523,443	+		Echvi_3790	0.87	-0.3
4,523,500	+				+0.1
4,523,500	+				-1.3
4,523,501	-				+0.2
4,523,501	-				+0.3
4,523,530	+				-0.0
4,523,533	-				-0.6
4,523,582	+				-0.7
4,523,691	+		Echvi_3791	0.13	-0.5
4,523,691	+		Echvi_3791	0.13	-1.7
4,523,691	+		Echvi_3791	0.13	-0.6
4,523,692	-		Echvi_3791	0.13	-1.3
4,523,791	+		Echvi_3791	0.21	-0.8
4,523,818	+		Echvi_3791	0.24	-1.0
4,523,855	-		Echvi_3791	0.27	-0.4
4,523,985	+		Echvi_3791	0.38	-0.5
4,523,988	+		Echvi_3791	0.38	-1.3
4,523,989	-		Echvi_3791	0.38	+0.6
4,523,990	-		Echvi_3791	0.38	-0.2
4,524,089	+		Echvi_3791	0.47	-0.3
4,524,089	+		Echvi_3791	0.47	-0.6
4,524,090	-		Echvi_3791	0.47	-0.4
4,524,213	-		Echvi_3791	0.58	-1.2
4,524,325	+		Echvi_3791	0.67	-0.8
4,524,431	+		Echvi_3791	0.76	-1.9
4,524,431	+		Echvi_3791	0.76	-0.7
4,524,459	-		Echvi_3791	0.79	-1.2
4,524,542	+		Echvi_3791	0.86	-1.4
4,524,573	+		Echvi_3791	0.88	-1.2
4,524,700	-				-1.0
4,524,710	-				+0.0
4,524,711	+				+0.8
4,524,711	+				-0.3
4,524,711	+				-0.5
4,524,712	-				-0.2
4,524,712	-				-0.4
4,524,712	-				+0.7
4,524,712	-				-1.9
4,524,724	-				+0.1
4,524,754	-				-0.7
4,524,763	-				+0.7
4,524,763	-				-1.2
4,524,946	+		Echvi_3792	0.16	+0.0
4,524,947	-		Echvi_3792	0.16	-1.2
4,525,006	+		Echvi_3792	0.21	-0.8
4,525,007	-		Echvi_3792	0.21	-2.7
4,525,087	-		Echvi_3792	0.28	+0.8
4,525,092	-		Echvi_3792	0.29	-0.8
4,525,165	+		Echvi_3792	0.35	+0.2
4,525,176	+		Echvi_3792	0.36	-0.7
4,525,187	+		Echvi_3792	0.37	-0.3
4,525,187	+		Echvi_3792	0.37	-1.0
4,525,187	+		Echvi_3792	0.37	+0.0
4,525,187	+		Echvi_3792	0.37	-0.3
4,525,188	-		Echvi_3792	0.37	+0.4
4,525,188	-		Echvi_3792	0.37	+0.7
4,525,188	-		Echvi_3792	0.37	+0.3
4,525,199	+		Echvi_3792	0.38	-1.0
4,525,199	+		Echvi_3792	0.38	+0.2
4,525,199	+		Echvi_3792	0.38	-1.0
4,525,201	+		Echvi_3792	0.38	-1.1
4,525,202	-		Echvi_3792	0.38	+0.5
4,525,226	+		Echvi_3792	0.41	-0.2
4,525,283	-		Echvi_3792	0.46	-1.6
4,525,302	-		Echvi_3792	0.47	+0.2
4,525,338	+		Echvi_3792	0.51	+0.2
4,525,354	+		Echvi_3792	0.52	-0.9
4,525,354	+		Echvi_3792	0.52	-0.6
4,525,355	-		Echvi_3792	0.52	-2.1
4,525,476	+		Echvi_3792	0.63	+0.3
4,525,477	-		Echvi_3792	0.63	+1.3
4,525,537	-		Echvi_3792	0.68	+0.8
4,525,545	+		Echvi_3792	0.69	+0.7
4,525,567	+		Echvi_3792	0.71	-0.7