Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_3781

Experiment: m.b. Fusidic 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Fusidic 0.003 mg/ml
4,509,877	+		Echvi_3780	0.81	-0.4
4,509,877	+				+0.8
4,509,877	+		Echvi_3780	0.81	-2.3
4,509,906	+		Echvi_3780	0.82	-0.2
4,509,906	+		Echvi_3780	0.82	-0.7
4,510,034	+		Echvi_3780	0.85	-0.8
4,510,150	+		Echvi_3780	0.89	-1.2
4,510,186	-		Echvi_3780	0.90	+0.7
4,510,186	-		Echvi_3780	0.90	-0.3
4,510,186	-		Echvi_3780	0.90	-1.5
4,510,240	+				-0.4
4,510,240	+				+0.7
4,510,241	-				+1.1
4,510,249	+				+0.2
4,510,249	+				+0.7
4,510,250	-				+2.4
4,510,250	-				+0.1
4,510,315	-				+1.1
4,510,429	-				+0.1
4,510,442	-				-0.2
4,510,475	+				-0.4
4,510,488	+				+0.6
4,510,489	-				-1.5
4,510,501	+				-0.2
4,510,501	+				-1.5
4,510,502	-				-0.6
4,510,533	+				-0.4
4,510,541	+				+0.0
4,510,675	+				+0.4
4,510,681	+				-2.7
4,510,686	+				+0.8
4,510,697	+				-0.4
4,510,697	+				+0.1
4,510,698	-				-1.3
4,510,719	+				-0.8
4,510,751	-				+1.8
4,510,854	+				+1.5
4,510,883	-				+0.1
4,510,940	+				+0.2
4,511,064	-		Echvi_3781	0.21	-1.2
4,511,151	+		Echvi_3781	0.30	-0.3
4,511,152	-		Echvi_3781	0.30	+0.1
4,511,265	+		Echvi_3781	0.40	-0.5
4,511,265	+		Echvi_3781	0.40	-0.6
4,511,273	+		Echvi_3781	0.41	-0.7
4,511,274	-		Echvi_3781	0.41	+0.2
4,511,358	-		Echvi_3781	0.49	+0.2
4,511,515	+		Echvi_3781	0.64	+0.3
4,511,515	+		Echvi_3781	0.64	-0.7
4,511,516	-		Echvi_3781	0.64	+0.1
4,511,516	-		Echvi_3781	0.64	+0.8
4,511,516	-		Echvi_3781	0.64	+0.6
4,511,517	+		Echvi_3781	0.64	-1.3
4,511,517	+		Echvi_3781	0.64	-1.3
4,511,518	-		Echvi_3781	0.64	-0.8
4,511,625	-		Echvi_3781	0.74	+0.8
4,511,652	+		Echvi_3781	0.77	-1.0
4,511,652	+		Echvi_3781	0.77	-0.2
4,511,652	+		Echvi_3781	0.77	+0.2
4,511,653	-		Echvi_3781	0.77	-0.5
4,511,681	+		Echvi_3781	0.79	-1.0
4,511,838	-				+2.4
4,511,864	-				-1.3
4,511,864	-				-1.6
4,511,864	-				-0.3
4,511,864	-				-0.1
4,511,880	+				+0.7
4,511,901	-				-0.5
4,511,903	-				-0.9
4,511,919	-				-0.9
4,511,984	+		Echvi_3782	0.12	+1.8
4,511,984	+		Echvi_3782	0.12	-1.1
4,512,013	+		Echvi_3782	0.17	+0.8
4,512,236	+		Echvi_3782	0.52	+0.2
4,512,242	+		Echvi_3782	0.53	-1.3
4,512,301	+		Echvi_3782	0.63	+1.1
4,512,301	+		Echvi_3782	0.63	-0.6
4,512,302	-		Echvi_3782	0.63	+1.0
4,512,303	+		Echvi_3782	0.63	+1.1
4,512,303	+		Echvi_3782	0.63	-0.7
4,512,303	+		Echvi_3782	0.63	-0.1
4,512,304	-		Echvi_3782	0.63	+0.9
4,512,304	-		Echvi_3782	0.63	+0.8
4,512,304	-		Echvi_3782	0.63	+0.4
4,512,306	-		Echvi_3782	0.64	-0.0
4,512,306	-		Echvi_3782	0.64	-0.0
4,512,392	+		Echvi_3782	0.78	-0.4
4,512,497	+				-0.6
4,512,686	-				-0.6
4,512,779	-				+1.0
4,512,783	+				-0.5
4,512,783	+				-0.4
4,512,801	-				+0.0
4,512,819	-				-0.2
4,512,819	-				+0.8
4,512,823	+				-0.8
4,512,839	-				+0.5
4,512,843	+				+0.1
4,512,843	+				-0.3
4,512,844	-				-2.4
4,512,844	-				-1.6