Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_2933

Experiment: m.b. Fusidic 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Fusidic 0.003 mg/ml
3,510,003	+		Echvi_2932	0.32	+1.2
3,510,004	-		Echvi_2932	0.32	+0.5
3,510,010	-		Echvi_2932	0.33	-0.9
3,510,082	+		Echvi_2932	0.47	-0.1
3,510,083	-		Echvi_2932	0.48	+0.1
3,510,194	+		Echvi_2932	0.70	+0.7
3,510,195	-				+0.2
3,510,199	+		Echvi_2932	0.71	-0.2
3,510,200	-		Echvi_2932	0.71	-0.2
3,510,246	-		Echvi_2932	0.81	-1.0
3,510,265	-		Echvi_2932	0.84	-0.2
3,510,277	+				+1.8
3,510,277	+		Echvi_2932	0.87	-2.2
3,510,277	+		Echvi_2932	0.87	+0.8
3,510,277	+		Echvi_2932	0.87	+0.8
3,510,277	+		Echvi_2932	0.87	+0.7
3,510,278	-		Echvi_2932	0.87	+0.5
3,510,278	-		Echvi_2932	0.87	-0.5
3,510,282	+		Echvi_2932	0.88	-1.2
3,510,321	+				+0.2
3,510,324	-				+0.2
3,510,414	+				+0.1
3,510,415	-				-0.2
3,510,459	+				-0.9
3,510,689	+				+0.2
3,510,712	-				+0.6
3,510,712	-				-2.0
3,510,800	-				-0.2
3,510,813	-				-1.2
3,510,824	+				+1.5
3,510,828	+				-1.1
3,510,858	+				+0.8
3,510,903	+				-1.0
3,510,925	-				+0.3
3,510,935	+				-2.0
3,510,939	+				-0.3
3,510,939	+				-0.8
3,510,940	-				+0.2
3,510,944	+				+0.2
3,510,945	-				-0.2
3,510,966	+				+0.1
3,510,966	+				-0.9
3,510,967	-				-1.1
3,510,968	+				-0.6
3,510,968	+				-0.9
3,510,968	+				+1.8
3,510,969	-				-0.6
3,510,971	+				-0.9
3,510,972	-				+0.6
3,511,038	+		Echvi_2933	0.17	-0.6
3,511,039	-		Echvi_2933	0.17	-1.3
3,511,039	-		Echvi_2933	0.17	-0.4
3,511,041	+		Echvi_2933	0.17	-0.5
3,511,042	-		Echvi_2933	0.17	-0.2
3,511,089	+		Echvi_2933	0.25	+0.7
3,511,089	+		Echvi_2933	0.25	-0.2
3,511,090	-		Echvi_2933	0.25	-0.0
3,511,100	+		Echvi_2933	0.26	-0.5
3,511,191	+		Echvi_2933	0.40	+0.8
3,511,192	-		Echvi_2933	0.40	+1.1
3,511,192	-		Echvi_2933	0.40	-0.9
3,511,203	-		Echvi_2933	0.42	+0.1
3,511,203	-		Echvi_2933	0.42	-2.2
3,511,203	-		Echvi_2933	0.42	-0.0
3,511,209	+		Echvi_2933	0.42	+0.0
3,511,210	-		Echvi_2933	0.43	-0.7
3,511,234	+		Echvi_2933	0.46	-1.1
3,511,235	-		Echvi_2933	0.46	+0.7
3,511,235	-		Echvi_2933	0.46	+0.2
3,511,239	+		Echvi_2933	0.47	-0.9
3,511,272	+		Echvi_2933	0.52	-0.2
3,511,295	-		Echvi_2933	0.55	-1.4
3,511,393	-		Echvi_2933	0.70	-0.6
3,511,659	+				-0.9
3,511,660	-				+0.2
3,511,752	-				-0.2
3,511,808	-		Echvi_2934	0.10	-0.5
3,511,836	+		Echvi_2934	0.12	-0.5
3,511,932	-		Echvi_2934	0.17	+0.7
3,511,932	-		Echvi_2934	0.17	-0.2
3,511,932	-		Echvi_2934	0.17	+1.2
3,512,044	-		Echvi_2934	0.23	+1.2
3,512,075	+		Echvi_2934	0.25	+0.2
3,512,099	+		Echvi_2934	0.26	+0.6
3,512,099	+		Echvi_2934	0.26	-0.1
3,512,100	-		Echvi_2934	0.26	+1.5
3,512,100	-		Echvi_2934	0.26	-0.3
3,512,143	+		Echvi_2934	0.29	-0.3
3,512,144	-		Echvi_2934	0.29	+1.4
3,512,167	+		Echvi_2934	0.30	-0.8
3,512,167	+		Echvi_2934	0.30	-0.6
3,512,168	-		Echvi_2934	0.30	+1.1
3,512,168	-		Echvi_2934	0.30	-1.2
3,512,188	-		Echvi_2934	0.31	-0.4
3,512,251	-		Echvi_2934	0.35	+0.0
3,512,275	-		Echvi_2934	0.36	+0.6
3,512,292	-		Echvi_2934	0.37	-0.1
3,512,339	+		Echvi_2934	0.40	+1.2
3,512,364	-		Echvi_2934	0.41	+0.1
3,512,381	+		Echvi_2934	0.42	+0.4
3,512,474	-		Echvi_2934	0.47	+0.0
3,512,475	+		Echvi_2934	0.47	+1.0
3,512,475	+		Echvi_2934	0.47	+2.6
3,512,475	+		Echvi_2934	0.47	+0.2
3,512,476	-		Echvi_2934	0.48	+1.1
3,512,476	-		Echvi_2934	0.48	+1.0
3,512,476	-		Echvi_2934	0.48	+0.5
3,512,528	-		Echvi_2934	0.50	+1.0
3,512,528	-		Echvi_2934	0.50	-0.7
3,512,538	+		Echvi_2934	0.51	-0.8