Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_2371

Experiment: m.b. Fusidic 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Fusidic 0.003 mg/ml
2,808,035	+		Echvi_2369	0.75	-1.1
2,808,036	-		Echvi_2369	0.75	-1.1
2,808,036	-		Echvi_2369	0.75	+0.9
2,808,038	+		Echvi_2369	0.75	+0.2
2,808,040	+		Echvi_2369	0.76	-0.6
2,808,041	-		Echvi_2369	0.76	-0.1
2,808,066	+		Echvi_2369	0.79	+1.2
2,808,067	-		Echvi_2369	0.79	+0.2
2,808,067	-		Echvi_2369	0.79	-0.1
2,808,084	+		Echvi_2369	0.82	-0.7
2,808,085	-		Echvi_2369	0.82	-0.2
2,808,177	-				+0.9
2,808,185	+				-0.5
2,808,191	+				+0.5
2,808,192	-				+0.5
2,808,227	+				+0.7
2,808,227	+				-0.7
2,808,235	+				+0.5
2,808,236	-				-0.3
2,808,247	+				+0.1
2,808,247	+				+0.5
2,808,248	-				-1.6
2,808,251	+				-0.1
2,808,252	-				-0.1
2,808,296	-				+1.5
2,808,389	-				-0.1
2,808,393	+				+0.4
2,808,432	+		Echvi_2370	0.15	-0.1
2,808,433	-		Echvi_2370	0.15	+0.3
2,808,436	-		Echvi_2370	0.16	-0.3
2,808,468	+		Echvi_2370	0.27	+0.9
2,808,507	-		Echvi_2370	0.40	-0.3
2,808,537	+		Echvi_2370	0.50	-2.0
2,808,599	+		Echvi_2370	0.71	-0.4
2,808,599	+		Echvi_2370	0.71	-0.6
2,808,599	+		Echvi_2370	0.71	+0.2
2,808,601	+		Echvi_2370	0.71	+1.0
2,808,601	+		Echvi_2370	0.71	+0.3
2,808,601	+		Echvi_2370	0.71	+0.4
2,808,601	+		Echvi_2370	0.71	-0.6
2,808,602	-		Echvi_2370	0.72	+0.2
2,808,602	-		Echvi_2370	0.72	+1.7
2,808,602	-		Echvi_2370	0.72	-0.4
2,808,602	-		Echvi_2370	0.72	+1.3
2,808,658	-				+0.3
2,808,658	-				-1.9
2,808,658	-				-0.3
2,808,658	-				+0.1
2,808,675	+				-2.6
2,808,686	+				-0.2
2,808,688	+				+1.3
2,808,688	+				-0.2
2,808,689	-				-1.4
2,808,723	+				-0.3
2,808,811	+				-0.3
2,808,812	-				-0.4
2,808,862	+				-1.0
2,808,862	+				-0.4
2,808,863	-				+0.6
2,808,872	+				+0.2
2,808,878	+				-0.3
2,808,897	+				+0.9
2,808,897	+				+0.6
2,808,897	+				-0.2
2,808,898	-				-0.1
2,808,898	-				-0.1
2,808,898	-				-0.1
2,808,898	-				+0.7
2,808,933	+				+1.5
2,809,228	+		Echvi_2371	0.23	+0.2
2,809,228	+		Echvi_2371	0.23	+0.5
2,809,228	+		Echvi_2371	0.23	+2.6
2,809,237	+		Echvi_2371	0.24	+0.3
2,809,237	+		Echvi_2371	0.24	+1.9
2,809,239	+		Echvi_2371	0.24	+0.0
2,809,239	+		Echvi_2371	0.24	-0.9
2,809,239	+		Echvi_2371	0.24	+3.5
2,809,240	-		Echvi_2371	0.24	+0.2
2,809,240	-		Echvi_2371	0.24	+0.7
2,809,240	-		Echvi_2371	0.24	-0.7
2,809,240	-		Echvi_2371	0.24	+2.5
2,809,240	-		Echvi_2371	0.24	+0.1
2,809,304	+		Echvi_2371	0.31	-0.5
2,809,321	+		Echvi_2371	0.33	+0.3
2,809,335	+		Echvi_2371	0.34	+0.9
2,809,335	+		Echvi_2371	0.34	+0.8
2,809,336	-		Echvi_2371	0.34	+0.1
2,809,336	-		Echvi_2371	0.34	+1.9
2,809,350	+		Echvi_2371	0.36	+1.4
2,809,350	+		Echvi_2371	0.36	+0.4
2,809,373	+		Echvi_2371	0.38	+1.2
2,809,373	+		Echvi_2371	0.38	+1.0
2,809,404	+		Echvi_2371	0.41	+1.7
2,809,404	+		Echvi_2371	0.41	-0.5
2,809,404	+		Echvi_2371	0.41	+2.3
2,809,404	+		Echvi_2371	0.41	-1.1
2,809,404	+		Echvi_2371	0.41	+0.6
2,809,404	+		Echvi_2371	0.41	+0.2
2,809,405	-		Echvi_2371	0.41	+0.9
2,809,405	-		Echvi_2371	0.41	-0.1
2,809,469	+		Echvi_2371	0.48	+0.4
2,809,470	-		Echvi_2371	0.48	+0.2
2,809,482	-		Echvi_2371	0.49	-0.5
2,809,482	-		Echvi_2371	0.49	-0.3
2,809,483	+		Echvi_2371	0.49	+1.7
2,809,483	+		Echvi_2371	0.49	+0.3
2,809,483	+		Echvi_2371	0.49	+0.7
2,809,484	-		Echvi_2371	0.49	+1.3
2,809,484	-		Echvi_2371	0.49	+1.3
2,809,484	-		Echvi_2371	0.49	-0.7
2,809,490	+		Echvi_2371	0.50	-0.7
2,809,491	-		Echvi_2371	0.50	+0.7
2,809,526	-		Echvi_2371	0.54	+0.7
2,809,660	-		Echvi_2371	0.67	+0.7
2,809,682	-		Echvi_2371	0.70	+1.2
2,809,682	-		Echvi_2371	0.70	+0.5
2,809,682	-		Echvi_2371	0.70	+0.6
2,809,682	-		Echvi_2371	0.70	+2.3
2,809,691	+		Echvi_2371	0.71	+0.4
2,809,691	+		Echvi_2371	0.71	+0.3
2,809,748	+		Echvi_2371	0.77	-0.3
2,809,749	-		Echvi_2371	0.77	+0.6
2,809,749	-		Echvi_2371	0.77	-0.0
2,809,749	-		Echvi_2371	0.77	+0.1
2,809,840	-		Echvi_2371	0.86	-1.2
2,809,856	-		Echvi_2371	0.88	+0.0
2,809,856	-		Echvi_2371	0.88	+1.9
2,809,861	+		Echvi_2371	0.88	+1.1
2,809,861	+		Echvi_2371	0.88	-0.3
2,809,943	+				+0.0
2,809,944	-				+0.2
2,809,944	-				-0.1
2,809,962	+				+1.0
2,809,963	-				+2.2
2,809,963	-				-0.7
2,809,976	-				+0.3
2,809,988	-				-0.2
2,809,988	-				+1.9
2,809,989	+				+0.4
2,809,989	+				+0.2
2,809,989	+				-1.0
2,809,990	-				+1.2
2,809,990	-				-0.3
2,810,010	+				+2.4
2,810,028	+				+1.0
2,810,070	+				-0.3
2,810,071	-				+0.3
2,810,612	+				-0.5
2,810,650	-		Echvi_2373	0.13	+0.3
2,810,673	+		Echvi_2373	0.16	+0.2
2,810,673	+		Echvi_2373	0.16	+1.6
2,810,674	-		Echvi_2373	0.16	+0.3
2,810,694	-		Echvi_2373	0.19	+0.9
2,810,733	+		Echvi_2373	0.23	+0.1
2,810,785	-		Echvi_2373	0.29	-0.9
2,810,785	-		Echvi_2373	0.29	-0.2
2,810,968	-		Echvi_2373	0.51	+1.4
2,810,968	-		Echvi_2373	0.51	+1.1