Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_2055

Experiment: m.b. Fusidic 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Fusidic 0.003 mg/ml
2,422,213	-				-0.4
2,422,217	-				+0.7
2,422,231	-				-0.4
2,422,239	+				+0.7
2,422,703	+		Echvi_2054	0.77	-0.6
2,422,703	+		Echvi_2054	0.77	-0.6
2,422,703	+		Echvi_2054	0.77	-2.0
2,422,704	-		Echvi_2054	0.78	-0.6
2,422,704	-		Echvi_2054	0.78	+1.5
2,422,720	+				-0.2
2,422,756	-				-0.4
2,422,756	-				+0.8
2,422,758	-				+0.0
2,422,780	+				+0.1
2,422,781	-				-0.3
2,422,786	-				+0.5
2,422,940	+				-1.8
2,422,940	+				-0.3
2,423,012	-				-1.2
2,423,012	-				+1.6
2,423,095	+		Echvi_2055	0.14	-0.2
2,423,107	+		Echvi_2055	0.14	-0.4
2,423,107	+		Echvi_2055	0.14	+0.6
2,423,108	-		Echvi_2055	0.14	+0.6
2,423,148	-		Echvi_2055	0.17	-0.1
2,423,169	+		Echvi_2055	0.18	-0.2
2,423,169	+		Echvi_2055	0.18	+0.4
2,423,183	-		Echvi_2055	0.19	-0.5
2,423,207	-		Echvi_2055	0.20	-2.0
2,423,207	-		Echvi_2055	0.20	+0.6
2,423,243	-		Echvi_2055	0.22	-0.4
2,423,311	+		Echvi_2055	0.26	+1.6
2,423,312	-		Echvi_2055	0.27	+0.2
2,423,333	-		Echvi_2055	0.28	-0.7
2,423,372	+		Echvi_2055	0.30	-0.2
2,423,378	-		Echvi_2055	0.30	-0.8
2,423,412	-		Echvi_2055	0.32	+0.1
2,423,465	+		Echvi_2055	0.36	+0.2
2,423,466	-		Echvi_2055	0.36	-0.2
2,423,466	-		Echvi_2055	0.36	-0.6
2,423,539	+		Echvi_2055	0.40	+0.6
2,423,623	+		Echvi_2055	0.45	-1.4
2,423,624	-				+0.9
2,423,753	-		Echvi_2055	0.53	-0.4
2,423,758	+		Echvi_2055	0.53	-1.1
2,423,758	+		Echvi_2055	0.53	+0.4
2,423,758	+		Echvi_2055	0.53	-0.1
2,423,759	-		Echvi_2055	0.53	+0.2
2,423,759	-		Echvi_2055	0.53	+1.5
2,423,779	-		Echvi_2055	0.54	-0.7
2,423,826	-		Echvi_2055	0.57	-0.2
2,423,826	-		Echvi_2055	0.57	+0.6
2,423,859	-		Echvi_2055	0.59	+0.2
2,423,859	-		Echvi_2055	0.59	-0.2
2,423,928	+		Echvi_2055	0.63	+0.9
2,423,929	-		Echvi_2055	0.63	-1.5
2,424,172	+		Echvi_2055	0.78	+0.8
2,424,173	-		Echvi_2055	0.78	+0.4
2,424,173	-		Echvi_2055	0.78	-0.1
2,424,173	-		Echvi_2055	0.78	-1.2
2,424,173	-		Echvi_2055	0.78	+0.8
2,424,176	+		Echvi_2055	0.78	-0.3
2,424,176	+		Echvi_2055	0.78	-1.6
2,424,177	-		Echvi_2055	0.78	+0.1
2,424,177	-		Echvi_2055	0.78	-0.9
2,424,229	+		Echvi_2055	0.81	-1.0
2,424,229	+		Echvi_2055	0.81	+2.4
2,424,230	-		Echvi_2055	0.81	+1.9
2,424,271	-		Echvi_2055	0.83	+0.5
2,424,281	-		Echvi_2055	0.84	+0.8
2,424,281	-		Echvi_2055	0.84	-1.2
2,424,281	-		Echvi_2055	0.84	+0.5
2,424,281	-		Echvi_2055	0.84	-0.6
2,424,295	+		Echvi_2055	0.85	+1.3
2,424,296	-		Echvi_2055	0.85	-0.0
2,424,340	-		Echvi_2055	0.87	+0.2
2,424,380	-		Echvi_2055	0.90	-1.1
2,424,497	+				-0.3
2,424,536	-				-0.1
2,424,554	-				+2.9
2,424,557	-				-1.3
2,424,557	-				+0.4
2,424,557	-				+0.1
2,424,570	+				+0.4
2,424,596	-				+0.6
2,424,600	+				+1.9
2,424,646	-				-0.3
2,424,685	-				-1.0
2,424,686	+				-1.7
2,424,687	-				-0.8
2,424,687	-				+0.9
2,424,742	+				-0.6
2,424,798	+				+0.6
2,424,799	-				-0.5
2,424,799	-				-0.5
2,424,811	-				-0.1
2,424,839	-				-1.3
2,424,920	+		Echvi_2056	0.13	+0.0
2,424,939	-		Echvi_2056	0.15	-0.2
2,424,942	-		Echvi_2056	0.15	+0.0
2,425,112	+		Echvi_2056	0.25	-1.4
2,425,113	-		Echvi_2056	0.25	+0.1
2,425,221	+		Echvi_2056	0.31	+0.8
2,425,249	-		Echvi_2056	0.33	-2.0
2,425,323	+		Echvi_2056	0.37	+0.7
2,425,388	+		Echvi_2056	0.41	-1.5
2,425,412	+		Echvi_2056	0.42	+0.9
2,425,412	+		Echvi_2056	0.42	-0.5
2,425,421	-		Echvi_2056	0.43	-0.1
2,425,436	-		Echvi_2056	0.44	+0.6
2,425,485	+		Echvi_2056	0.47	-0.1
2,425,485	+		Echvi_2056	0.47	-0.6
2,425,486	-		Echvi_2056	0.47	-0.5
2,425,496	+		Echvi_2056	0.47	-0.2
2,425,498	+		Echvi_2056	0.47	+0.4
2,425,499	-		Echvi_2056	0.48	+0.6
2,425,499	-		Echvi_2056	0.48	+1.4