Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1872

Experiment: m.b. Fusidic 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Fusidic 0.003 mg/ml
2,198,340	-		Echvi_1871	0.69	-0.9
2,198,355	-		Echvi_1871	0.70	+0.4
2,198,363	+		Echvi_1871	0.70	+0.5
2,198,364	-		Echvi_1871	0.70	-0.4
2,198,367	+		Echvi_1871	0.70	-0.1
2,198,435	-		Echvi_1871	0.74	-0.5
2,198,448	-		Echvi_1871	0.75	+0.1
2,198,500	-		Echvi_1871	0.78	+0.3
2,198,512	-		Echvi_1871	0.79	+0.1
2,198,595	-		Echvi_1871	0.84	-0.1
2,198,595	-		Echvi_1871	0.84	-1.0
2,198,634	-		Echvi_1871	0.86	-1.2
2,198,706	-				-0.2
2,198,706	-				-1.3
2,198,721	+				-1.1
2,198,722	-				-0.6
2,198,722	-				+0.2
2,198,830	+				-0.4
2,198,838	+				-2.2
2,198,993	+				-1.0
2,199,038	+				+1.2
2,199,039	-				-0.3
2,199,066	-				+1.1
2,199,066	-				-0.3
2,199,187	-				+0.3
2,199,187	-				+3.5
2,199,273	-				+0.8
2,199,290	-				+0.6
2,199,377	+		Echvi_1872	0.11	-1.2
2,199,377	+		Echvi_1872	0.11	-0.9
2,199,462	-		Echvi_1872	0.28	-0.2
2,199,466	+		Echvi_1872	0.29	+0.2
2,199,467	-		Echvi_1872	0.29	-0.0
2,199,467	-		Echvi_1872	0.29	+0.0
2,199,467	-		Echvi_1872	0.29	-1.7
2,199,478	-		Echvi_1872	0.32	-0.2
2,199,508	+		Echvi_1872	0.38	+1.2
2,199,509	-		Echvi_1872	0.38	-0.9
2,199,509	-		Echvi_1872	0.38	-1.6
2,199,592	+		Echvi_1872	0.55	-0.7
2,199,603	+		Echvi_1872	0.58	+0.2
2,199,603	+		Echvi_1872	0.58	-1.4
2,199,604	-		Echvi_1872	0.58	-1.1
2,199,604	-		Echvi_1872	0.58	-0.8
2,199,625	+		Echvi_1872	0.62	-0.2
2,199,625	+		Echvi_1872	0.62	-2.0
2,199,626	-		Echvi_1872	0.62	-0.6
2,199,635	+		Echvi_1872	0.64	-0.1
2,199,636	-		Echvi_1872	0.64	-0.4
2,199,670	-		Echvi_1872	0.71	-0.9
2,199,670	-		Echvi_1872	0.71	+0.6
2,199,699	+		Echvi_1872	0.77	-0.8
2,199,699	+		Echvi_1872	0.77	-0.6
2,199,714	+		Echvi_1872	0.81	-0.6
2,199,714	+		Echvi_1872	0.81	-0.4
2,199,715	-		Echvi_1872	0.81	+1.2
2,199,721	+		Echvi_1872	0.82	-1.3
2,199,723	-		Echvi_1872	0.82	+2.9
2,199,723	-		Echvi_1872	0.82	-0.9
2,199,788	+				-0.5
2,199,788	+				-1.9
2,199,792	+				-0.5
2,199,798	-				-0.7
2,199,798	-				+0.3
2,199,819	-				-0.5
2,199,819	-				+0.5
2,199,820	+				-0.8
2,199,820	+				-1.0
2,199,820	+				-1.5
2,199,821	-				-1.2
2,199,824	+				+0.6
2,199,824	+				-0.0
2,199,824	+				-0.3
2,199,825	-				+0.2
2,199,825	-				-1.4
2,199,825	-				+0.1
2,199,825	-				-0.7
2,199,825	-				+0.4
2,199,842	-				+2.4
2,199,851	+		Echvi_1873	0.10	-0.4
2,199,861	-		Echvi_1873	0.12	-1.0
2,199,881	+		Echvi_1873	0.17	-0.3
2,199,886	+		Echvi_1873	0.18	-1.0
2,199,913	-		Echvi_1873	0.23	-0.6
2,199,914	+		Echvi_1873	0.24	-2.1
2,199,914	+		Echvi_1873	0.24	+0.6
2,199,915	-		Echvi_1873	0.24	+0.2
2,199,915	-		Echvi_1873	0.24	-1.0
2,199,957	-		Echvi_1873	0.33	-1.8
2,199,957	-		Echvi_1873	0.33	+0.3
2,199,957	-		Echvi_1873	0.33	+1.0
2,199,962	-		Echvi_1873	0.34	-1.4
2,199,969	-		Echvi_1873	0.35	+0.8
2,199,983	+		Echvi_1873	0.38	+0.9
2,199,984	-		Echvi_1873	0.39	+0.4
2,199,984	-		Echvi_1873	0.39	+0.6
2,199,984	-		Echvi_1873	0.39	+1.0
2,199,990	-		Echvi_1873	0.40	+0.8
2,200,081	+		Echvi_1873	0.60	-0.0
2,200,088	+		Echvi_1873	0.61	-1.3
2,200,089	-		Echvi_1873	0.61	-0.4
2,200,089	-		Echvi_1873	0.61	+0.1
2,200,129	+		Echvi_1873	0.70	+0.2
2,200,154	-		Echvi_1873	0.75	+0.2
2,200,169	-		Echvi_1873	0.78	-1.7
2,200,169	-		Echvi_1873	0.78	-1.0
2,200,220	+		Echvi_1873	0.89	-1.2
2,200,220	+		Echvi_1873	0.89	+0.3
2,200,266	+				+0.4
2,200,267	-				-0.6
2,200,272	+				-1.4
2,200,272	+				-1.4
2,200,273	-				-0.8
2,200,282	-				-0.3
2,200,387	+		Echvi_1874	0.14	+1.4
2,200,388	-		Echvi_1874	0.14	-0.6
2,200,574	+		Echvi_1874	0.36	-2.2
2,200,574	+		Echvi_1874	0.36	+0.0
2,200,574	+		Echvi_1874	0.36	+0.6
2,200,574	+		Echvi_1874	0.36	+0.4
2,200,625	-		Echvi_1874	0.42	-1.5
2,200,625	-		Echvi_1874	0.42	-0.3
2,200,625	-		Echvi_1874	0.42	-0.4
2,200,625	-		Echvi_1874	0.42	-0.5
2,200,628	+		Echvi_1874	0.42	-0.4
2,200,628	+		Echvi_1874	0.42	-0.2
2,200,629	-		Echvi_1874	0.43	-0.9
2,200,629	-		Echvi_1874	0.43	+1.4
2,200,685	-		Echvi_1874	0.49	-0.7
2,200,707	-		Echvi_1874	0.52	+0.4
2,200,754	+		Echvi_1874	0.57	+0.8
2,200,755	-		Echvi_1874	0.58	-0.2
2,200,773	-		Echvi_1874	0.60	+1.1
2,200,773	-		Echvi_1874	0.60	-0.4