Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1572

Experiment: m.b. Fusidic 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Fusidic 0.003 mg/ml
1,805,676	+		Echvi_1571	0.68	+0.4
1,805,677	-		Echvi_1571	0.68	+1.4
1,805,692	+		Echvi_1571	0.68	+1.0
1,805,755	+		Echvi_1571	0.71	+1.0
1,805,755	+		Echvi_1571	0.71	+0.0
1,805,755	+		Echvi_1571	0.71	+0.1
1,805,756	-		Echvi_1571	0.71	-0.9
1,805,756	-		Echvi_1571	0.71	-0.5
1,805,756	-		Echvi_1571	0.71	+0.9
1,805,756	-		Echvi_1571	0.71	+0.1
1,805,757	+		Echvi_1571	0.71	-0.1
1,805,757	+		Echvi_1571	0.71	-0.7
1,805,758	-		Echvi_1571	0.71	+1.3
1,805,758	-		Echvi_1571	0.71	+1.7
1,805,761	+		Echvi_1571	0.71	+1.6
1,805,762	-		Echvi_1571	0.71	-0.7
1,805,762	-		Echvi_1571	0.71	-1.1
1,805,764	-		Echvi_1571	0.71	-0.1
1,805,783	-		Echvi_1571	0.72	-1.2
1,805,836	+		Echvi_1571	0.74	-2.8
1,805,841	+		Echvi_1571	0.74	-0.8
1,805,842	-		Echvi_1571	0.74	+0.4
1,805,845	+		Echvi_1571	0.74	+0.2
1,805,845	+		Echvi_1571	0.74	+0.2
1,805,846	-		Echvi_1571	0.74	+0.2
1,805,863	+		Echvi_1571	0.75	-1.1
1,805,864	-		Echvi_1571	0.75	+1.0
1,805,866	+		Echvi_1571	0.75	-0.6
1,805,944	-		Echvi_1571	0.78	-0.6
1,805,951	-		Echvi_1571	0.79	-0.7
1,805,951	-		Echvi_1571	0.79	-0.6
1,805,982	+		Echvi_1571	0.80	+0.1
1,805,989	+		Echvi_1571	0.80	-1.6
1,805,992	+		Echvi_1571	0.80	-1.7
1,805,992	+		Echvi_1571	0.80	+0.2
1,805,993	-		Echvi_1571	0.80	-0.6
1,805,993	-		Echvi_1571	0.80	+0.7
1,805,993	-		Echvi_1571	0.80	-0.8
1,805,993	-		Echvi_1571	0.80	-0.1
1,805,994	+		Echvi_1571	0.81	+0.7
1,805,994	+		Echvi_1571	0.81	-1.0
1,805,994	+		Echvi_1571	0.81	-0.5
1,805,994	+		Echvi_1571	0.81	-1.6
1,805,994	+		Echvi_1571	0.81	+0.4
1,805,995	-		Echvi_1571	0.81	-0.4
1,805,995	-		Echvi_1571	0.81	+2.8
1,805,995	-		Echvi_1571	0.81	-0.1
1,805,995	-		Echvi_1571	0.81	+0.0
1,805,997	+		Echvi_1571	0.81	-2.2
1,805,997	+		Echvi_1571	0.81	+0.0
1,806,045	+		Echvi_1571	0.83	+0.0
1,806,045	+		Echvi_1571	0.83	+1.6
1,806,046	-		Echvi_1571	0.83	-0.6
1,806,046	-		Echvi_1571	0.83	-0.4
1,806,046	-		Echvi_1571	0.83	+1.0
1,806,046	-		Echvi_1571	0.83	+0.1
1,806,073	+		Echvi_1571	0.84	+0.2
1,806,103	-		Echvi_1571	0.85	+0.3
1,806,103	-		Echvi_1571	0.85	+1.2
1,806,127	-		Echvi_1571	0.86	-1.2
1,806,172	+		Echvi_1571	0.88	+0.2
1,806,284	-				-0.0
1,806,284	-				+0.7
1,806,284	-				-0.4
1,806,301	-				+0.2
1,806,507	+				-1.2
1,806,508	-				+0.9
1,806,529	-				-0.7
1,806,559	+				+0.9
1,806,596	+				+1.5
1,806,596	+				+0.4
1,806,596	+				-1.2
1,806,597	-				-0.2
1,806,597	-				+0.4
1,806,621	+				-1.3
1,806,630	+				-0.4
1,806,630	+				+0.5
1,806,630	+				+0.3
1,806,630	+				-0.9
1,806,631	-				-1.6
1,806,631	-				+1.0
1,806,631	-				+0.8
1,806,631	-				-0.4
1,806,631	-				+1.0
1,806,631	-				-0.4
1,806,634	+				-0.1
1,806,736	+				+0.8
1,806,736	+				+1.0
1,806,737	-				+0.1
1,806,737	-				-0.3
1,806,737	-				-0.1
1,806,750	+				-0.2
1,806,751	-				-0.1
1,806,759	+				-0.2
1,806,869	-		Echvi_1572	0.13	-0.2
1,806,869	-		Echvi_1572	0.13	-0.4
1,806,932	+		Echvi_1572	0.16	-1.0
1,806,932	+		Echvi_1572	0.16	-1.0
1,806,955	+		Echvi_1572	0.17	-0.4
1,806,956	-		Echvi_1572	0.17	-0.2
1,807,014	+		Echvi_1572	0.20	-1.0
1,807,234	-		Echvi_1572	0.30	+0.2
1,807,241	-		Echvi_1572	0.30	+0.6
1,807,251	+		Echvi_1572	0.31	-0.2
1,807,252	-		Echvi_1572	0.31	-0.5
1,807,252	-		Echvi_1572	0.31	-0.7
1,807,419	+		Echvi_1572	0.39	-0.2
1,807,420	-		Echvi_1572	0.39	+0.2
1,807,457	+		Echvi_1572	0.41	-0.4
1,807,458	-		Echvi_1572	0.41	-0.1
1,807,458	-		Echvi_1572	0.41	-0.8
1,807,507	-		Echvi_1572	0.43	-0.1
1,807,507	-		Echvi_1572	0.43	+0.2
1,807,639	+		Echvi_1572	0.49	-0.6
1,807,645	-		Echvi_1572	0.50	+0.1
1,807,665	+		Echvi_1572	0.51	-0.1
1,808,010	-		Echvi_1572	0.67	+0.8
1,808,126	-		Echvi_1572	0.72	-1.6
1,808,250	-		Echvi_1572	0.78	+0.0
1,808,283	-		Echvi_1572	0.80	+0.9
1,808,283	-		Echvi_1572	0.80	+0.7
1,808,325	+		Echvi_1572	0.82	+0.1
1,808,325	+		Echvi_1572	0.82	-0.3
1,808,348	+		Echvi_1572	0.83	+0.2
1,808,348	+		Echvi_1572	0.83	-1.0
1,808,372	-		Echvi_1572	0.84	-1.3
1,808,397	-		Echvi_1572	0.85	-0.3
1,808,447	+		Echvi_1572	0.88	+0.0
1,808,619	-				+1.7
1,808,644	-				+1.5
1,808,652	+				+0.1
1,808,658	+				-0.3
1,808,661	+				+0.8
1,808,661	+				+0.5
1,808,704	+				-0.2
1,808,705	-				+0.2
1,808,705	-				-1.3
1,808,708	+				+0.0
1,808,716	+				-1.2
1,808,717	-				+0.3
1,808,732	-				+0.7
1,808,830	+				-0.2
1,808,927	+		Echvi_1573	0.17	-0.6
1,808,928	-		Echvi_1573	0.17	-0.7
1,809,014	+		Echvi_1573	0.24	-0.6
1,809,014	+		Echvi_1573	0.24	+0.7
1,809,124	-		Echvi_1573	0.32	-1.1
1,809,124	-		Echvi_1573	0.32	-0.8
1,809,124	-		Echvi_1573	0.32	+0.4
1,809,125	+		Echvi_1573	0.32	-0.7
1,809,126	-		Echvi_1573	0.32	+0.0
1,809,126	-		Echvi_1573	0.32	+1.1
1,809,126	-		Echvi_1573	0.32	-1.0
1,809,279	-		Echvi_1573	0.44	-1.5
1,809,322	-		Echvi_1573	0.48	-0.5
1,809,322	-		Echvi_1573	0.48	+0.2
1,809,360	+		Echvi_1573	0.51	-0.5
1,809,370	-		Echvi_1573	0.51	+0.5
1,809,385	-		Echvi_1573	0.53	+0.5
1,809,398	-		Echvi_1573	0.54	-0.3
1,809,398	-		Echvi_1573	0.54	-0.3
1,809,431	+		Echvi_1573	0.56	-0.2
1,809,452	+		Echvi_1573	0.58	+0.1
1,809,452	+		Echvi_1573	0.58	-2.0
1,809,452	+		Echvi_1573	0.58	-0.2
1,809,453	-		Echvi_1573	0.58	+0.7
1,809,492	-		Echvi_1573	0.61	+0.3
1,809,584	-		Echvi_1573	0.68	-2.1
1,809,601	-				+0.7
1,809,701	+		Echvi_1573	0.77	-2.7
1,809,702	-		Echvi_1573	0.77	-0.6