Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1189

Experiment: m.b. Fusidic 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Fusidic 0.003 mg/ml
1,363,692	-		Echvi_1188	0.66	+1.2
1,363,713	-		Echvi_1188	0.67	-0.2
1,363,720	-		Echvi_1188	0.68	+0.3
1,363,889	-		Echvi_1188	0.81	-0.2
1,363,944	-		Echvi_1188	0.85	+0.1
1,363,963	-		Echvi_1188	0.87	-2.7
1,364,112	-				-0.4
1,364,133	-				+0.0
1,364,133	-				-0.5
1,364,133	-				+0.5
1,364,133	-				+2.2
1,364,267	-				+0.8
1,364,282	-				-2.2
1,364,282	-				-0.1
1,364,282	-				-1.1
1,364,282	-				-1.1
1,364,282	-				+0.7
1,364,282	-				+0.9
1,364,282	-				+1.0
1,364,282	-				-1.8
1,364,312	+				-1.0
1,364,313	-				+0.8
1,364,359	-				-0.5
1,364,375	+				-0.0
1,364,375	+				+0.5
1,364,375	+				+0.3
1,364,376	-				-1.0
1,364,376	-				+0.3
1,364,379	+				+0.5
1,364,379	+				+0.1
1,364,380	-				-2.3
1,364,384	+				+0.1
1,364,458	+				-0.6
1,364,601	+				+1.0
1,364,601	+				-1.2
1,364,601	+				+1.0
1,364,614	-				+0.5
1,364,617	+				+2.0
1,364,618	-				-0.5
1,364,693	-				+0.7
1,364,825	+		Echvi_1189	0.22	+0.6
1,364,826	-		Echvi_1189	0.22	-0.1
1,364,915	+		Echvi_1189	0.32	-0.8
1,364,916	-		Echvi_1189	0.32	-0.7
1,364,916	-		Echvi_1189	0.32	-0.4
1,364,982	+		Echvi_1189	0.39	-0.0
1,364,982	+		Echvi_1189	0.39	+1.0
1,364,982	+		Echvi_1189	0.39	+0.2
1,364,982	+		Echvi_1189	0.39	-0.5
1,364,983	-		Echvi_1189	0.39	+0.0
1,364,983	-		Echvi_1189	0.39	+0.9
1,365,110	-		Echvi_1189	0.52	-0.0
1,365,111	+		Echvi_1189	0.52	+0.1
1,365,117	+		Echvi_1189	0.53	-0.1
1,365,127	+		Echvi_1189	0.54	-1.0
1,365,127	+		Echvi_1189	0.54	-0.3
1,365,153	-		Echvi_1189	0.56	-0.5
1,365,181	+		Echvi_1189	0.59	-0.1
1,365,182	-		Echvi_1189	0.59	+0.6
1,365,216	+		Echvi_1189	0.63	-1.2
1,365,221	-		Echvi_1189	0.63	-0.9
1,365,270	+		Echvi_1189	0.69	+0.5
1,365,270	+		Echvi_1189	0.69	+0.8
1,365,271	-		Echvi_1189	0.69	+0.6
1,365,441	+		Echvi_1189	0.86	-0.3
1,365,441	+		Echvi_1189	0.86	+1.2
1,365,488	-				-0.2
1,365,504	+				-0.3
1,365,504	+				+1.0
1,365,504	+				-2.4
1,365,505	-				-0.1
1,365,505	-				+0.3
1,365,505	-				+1.5
1,365,522	+				+0.8
1,365,522	+				-0.5
1,365,522	+				-0.0
1,365,556	+				-0.3
1,365,558	+				-0.3
1,365,583	-				+1.0
1,365,607	+				+1.4
1,365,608	-				-1.4
1,365,663	+				-0.6
1,365,664	-				+0.1
1,365,664	-				+0.8
1,365,753	+		Echvi_1190	0.18	+1.4
1,365,853	+		Echvi_1190	0.33	-1.0
1,365,853	+		Echvi_1190	0.33	+2.3
1,365,942	+		Echvi_1190	0.46	+1.3
1,365,972	+		Echvi_1190	0.50	-0.9
1,365,973	-		Echvi_1190	0.50	-0.7
1,366,018	-		Echvi_1190	0.57	-0.2
1,366,034	-		Echvi_1190	0.59	+1.0
1,366,060	+		Echvi_1190	0.63	+0.5
1,366,061	-		Echvi_1190	0.63	+0.8
1,366,202	+		Echvi_1190	0.83	-0.6
1,366,255	+				-1.2
1,366,255	+				-0.8
1,366,256	-				+0.4
1,366,256	-				+0.2
1,366,256	-				-0.1
1,366,353	+				+0.6
1,366,354	-				+0.5
1,366,354	-				+1.0
1,366,358	+				-0.2
1,366,359	-				-0.7
1,366,359	-				+0.2
1,366,424	-				-0.5
1,366,435	+				-0.8
1,366,435	+				-1.0
1,366,526	-				-0.8
1,366,526	-				+0.4
1,366,526	-				+0.1
1,366,526	-				+1.2
1,366,526	-				-0.3
1,366,526	-				+0.3
1,366,526	-				-1.4
1,366,528	+				+0.0
1,366,528	+				+0.5
1,366,528	+				-0.3
1,366,528	+				-0.5
1,366,528	+				+1.6
1,366,529	-				+0.8
1,366,529	-				-0.3
1,366,529	-				+0.1
1,366,529	-				+0.5
1,366,529	-				+0.6
1,366,529	-				+0.1
1,366,529	-				-1.8
1,366,531	+				-0.2