Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1139

Experiment: m.b. Fusidic 0.003 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Fusidic 0.003 mg/ml
1,302,224	+		Echvi_1138	0.83	-0.6
1,302,325	+		Echvi_1138	0.86	-1.3
1,302,325	+		Echvi_1138	0.86	-0.1
1,302,325	+		Echvi_1138	0.86	-0.5
1,302,326	-		Echvi_1138	0.86	+0.7
1,302,326	-		Echvi_1138	0.86	-0.9
1,302,326	-		Echvi_1138	0.86	+1.4
1,302,326	-		Echvi_1138	0.86	+1.0
1,302,336	+		Echvi_1138	0.87	-1.1
1,302,338	+		Echvi_1138	0.87	+2.0
1,302,338	+		Echvi_1138	0.87	-0.7
1,302,338	+		Echvi_1138	0.87	+0.0
1,302,338	+		Echvi_1138	0.87	-1.4
1,302,438	+				+0.0
1,302,438	+				-1.5
1,302,438	+				-0.5
1,302,438	+				+1.2
1,302,438	+				-0.8
1,302,439	-				-1.6
1,302,441	-				-2.0
1,302,527	+				-0.0
1,302,527	+				-0.7
1,302,527	+				-3.0
1,302,528	-				+0.3
1,302,559	+				+0.1
1,302,559	+				-0.3
1,302,559	+				-1.1
1,302,560	-				+0.3
1,302,578	+				+0.8
1,302,579	-				-0.2
1,302,579	-				+0.7
1,302,672	-				+0.5
1,302,697	+				+1.5
1,302,707	+				-0.6
1,302,707	+				+1.0
1,302,707	+				+0.0
1,302,708	-				-1.0
1,302,715	-				+0.3
1,302,715	-				+1.2
1,302,754	+				-0.9
1,302,755	-				-0.3
1,302,755	-				-0.4
1,302,755	-				-0.1
1,302,755	-				+0.0
1,302,786	+				+0.2
1,302,786	+				-0.7
1,302,786	+				+0.9
1,302,787	-				-0.3
1,302,792	+				+0.0
1,302,793	-				-1.3
1,302,793	-				-0.2
1,302,880	-				-0.5
1,302,880	-				-2.3
1,302,887	+				+1.8
1,302,903	-				+0.3
1,302,903	-				-0.6
1,302,936	-				-0.1
1,302,968	-				+0.5
1,302,979	+				+0.8
1,303,007	+				+0.0
1,303,011	+				-0.3
1,303,011	+				-0.4
1,303,011	+				-0.5
1,303,046	+				-0.4
1,303,047	-				+0.5
1,303,152	+				-2.8
1,303,153	-				-0.5
1,303,153	-				-0.4
1,303,153	-				-0.8
1,303,171	-				-1.6
1,303,171	-				+0.6
1,303,171	-				-0.4
1,303,172	+				+0.3
1,303,173	-				-0.8
1,303,196	+				-0.5
1,303,201	+				+0.9
1,303,202	-				-0.7
1,303,202	-				+1.1
1,303,203	+				+0.7
1,303,203	+				-1.0
1,303,204	-				-1.2
1,303,204	-				-1.0
1,303,204	-				-2.0
1,303,219	+				+0.1
1,303,303	-		Echvi_1139	0.11	-1.0
1,303,303	-		Echvi_1139	0.11	-3.1
1,303,303	-		Echvi_1139	0.11	-1.0
1,303,323	+		Echvi_1139	0.13	-0.7
1,303,324	-		Echvi_1139	0.13	-3.6
1,303,324	-		Echvi_1139	0.13	-0.9
1,303,346	+		Echvi_1139	0.15	+1.0
1,303,346	+		Echvi_1139	0.15	-0.5
1,303,347	-		Echvi_1139	0.15	-1.5
1,303,347	-		Echvi_1139	0.15	-2.3
1,303,355	+		Echvi_1139	0.16	-1.1
1,303,356	-		Echvi_1139	0.16	-2.3
1,303,356	-		Echvi_1139	0.16	-3.2
1,303,456	+		Echvi_1139	0.26	-0.3
1,303,457	-		Echvi_1139	0.26	-0.9
1,303,522	+		Echvi_1139	0.32	-0.1
1,303,527	-		Echvi_1139	0.32	-0.1
1,303,527	-		Echvi_1139	0.32	-0.5
1,303,527	-		Echvi_1139	0.32	+0.5
1,303,536	-		Echvi_1139	0.33	-2.3
1,303,543	+		Echvi_1139	0.34	-1.8
1,303,544	-		Echvi_1139	0.34	-0.7
1,303,548	+		Echvi_1139	0.34	-0.2
1,303,549	-		Echvi_1139	0.35	-2.9
1,303,549	-		Echvi_1139	0.35	-2.5
1,303,549	-		Echvi_1139	0.35	-0.5
1,303,570	-		Echvi_1139	0.37	-3.6
1,303,570	-		Echvi_1139	0.37	-3.2
1,303,570	-		Echvi_1139	0.37	-1.8
1,303,596	+		Echvi_1139	0.39	-1.0
1,303,596	+		Echvi_1139	0.39	-1.5
1,303,601	+		Echvi_1139	0.40	-1.5
1,303,601	+		Echvi_1139	0.40	-0.8
1,303,602	-		Echvi_1139	0.40	-1.4
1,303,602	-		Echvi_1139	0.40	-1.7
1,303,604	+		Echvi_1139	0.40	-2.5
1,303,604	+		Echvi_1139	0.40	-2.3
1,303,604	+		Echvi_1139	0.40	-0.5
1,303,604	+		Echvi_1139	0.40	-1.5
1,303,604	+		Echvi_1139	0.40	-0.4
1,303,604	+		Echvi_1139	0.40	-4.0
1,303,604	+		Echvi_1139	0.40	-1.0
1,303,604	+		Echvi_1139	0.40	-1.8
1,303,605	-		Echvi_1139	0.40	-1.5
1,303,611	-		Echvi_1139	0.40	+1.0
1,303,614	+		Echvi_1139	0.41	-2.8
1,303,615	-		Echvi_1139	0.41	-1.8
1,303,615	-		Echvi_1139	0.41	-0.7
1,303,802	-		Echvi_1139	0.59	-1.8
1,303,836	+		Echvi_1139	0.62	-0.9
1,303,853	+		Echvi_1139	0.63	-2.4
1,303,884	+		Echvi_1139	0.66	-1.5
1,303,884	+		Echvi_1139	0.66	-1.9
1,303,885	-		Echvi_1139	0.66	-2.0
1,303,892	-		Echvi_1139	0.67	-4.2
1,303,905	+		Echvi_1139	0.68	-3.9
1,303,906	-		Echvi_1139	0.68	-1.8
1,303,906	-		Echvi_1139	0.68	-3.1
1,303,906	-		Echvi_1139	0.68	-2.9
1,303,906	-		Echvi_1139	0.68	-3.2
1,303,906	-		Echvi_1139	0.68	+0.7
1,303,906	-		Echvi_1139	0.68	-2.1
1,303,911	+		Echvi_1139	0.69	+1.6
1,304,003	+		Echvi_1139	0.78	-3.1
1,304,004	-		Echvi_1139	0.78	-3.7
1,304,004	-		Echvi_1139	0.78	-1.4
1,304,004	-		Echvi_1139	0.78	-0.7
1,304,004	-		Echvi_1139	0.78	-1.0
1,304,015	-		Echvi_1139	0.79	+0.0
1,304,034	+		Echvi_1139	0.81	-1.9
1,304,034	+		Echvi_1139	0.81	-2.6
1,304,034	+		Echvi_1139	0.81	-2.1
1,304,035	-		Echvi_1139	0.81	+0.6
1,304,035	-		Echvi_1139	0.81	-0.5
1,304,035	-		Echvi_1139	0.81	-2.0
1,304,035	-		Echvi_1139	0.81	-3.5
1,304,036	+		Echvi_1139	0.81	-0.2
1,304,037	-		Echvi_1139	0.81	-4.2
1,304,109	-		Echvi_1139	0.88	-1.2
1,304,230	+				+0.7
1,304,268	+				-3.3
1,304,310	+				-4.4
1,304,311	-				-3.5
1,304,322	+				-2.1
1,304,322	+				-3.3
1,304,322	+				-4.3
1,304,322	+				-3.9
1,304,323	-				+0.4
1,304,352	+		Echvi_1140	0.13	-3.2
1,304,353	-		Echvi_1140	0.13	-2.2
1,304,353	-		Echvi_1140	0.13	-0.8
1,304,358	+		Echvi_1140	0.14	-1.7
1,304,358	+		Echvi_1140	0.14	-3.7
1,304,358	+		Echvi_1140	0.14	-3.3
1,304,358	+		Echvi_1140	0.14	-1.0
1,304,359	-		Echvi_1140	0.14	+2.7
1,304,409	+		Echvi_1140	0.21	-0.7
1,304,409	+		Echvi_1140	0.21	-1.5
1,304,492	+		Echvi_1140	0.32	-1.0
1,304,492	+		Echvi_1140	0.32	-1.1
1,304,492	+		Echvi_1140	0.32	-2.6
1,304,524	-		Echvi_1140	0.36	-2.3
1,304,553	+		Echvi_1140	0.40	-1.5
1,304,554	-		Echvi_1140	0.40	+0.5
1,304,554	-		Echvi_1140	0.40	-3.9
1,304,629	+		Echvi_1140	0.50	-2.5
1,304,646	+		Echvi_1140	0.53	-2.0
1,304,646	+		Echvi_1140	0.53	-3.2
1,304,647	-		Echvi_1140	0.53	-1.7
1,304,756	+		Echvi_1140	0.67	-3.5
1,304,757	-		Echvi_1140	0.67	-2.9
1,304,863	+		Echvi_1140	0.82	-1.0
1,304,863	+		Echvi_1140	0.82	-1.7
1,304,864	-		Echvi_1140	0.82	-3.9
1,304,864	-		Echvi_1140	0.82	-2.3
1,304,864	-		Echvi_1140	0.82	-1.4
1,304,866	+		Echvi_1140	0.82	-2.2
1,304,866	+		Echvi_1140	0.82	+1.0
1,304,867	-		Echvi_1140	0.82	-2.1
1,304,868	+		Echvi_1140	0.82	-1.3
1,304,868	+		Echvi_1140	0.82	-1.8
1,304,868	+		Echvi_1140	0.82	-3.2
1,304,869	-		Echvi_1140	0.83	-1.9
1,304,874	+		Echvi_1140	0.83	-3.3
1,304,875	-		Echvi_1140	0.83	-1.3
1,304,875	-		Echvi_1140	0.83	-0.9
1,304,875	-		Echvi_1140	0.83	-2.7
1,304,883	+		Echvi_1140	0.84	-2.0
1,304,929	+				-4.2
1,304,930	-				-1.5
1,304,984	-				-2.6
1,304,984	-				-2.8
1,304,995	-				-2.6
1,305,090	+				+2.4
1,305,122	+				-0.9
1,305,133	+				+0.2
1,305,138	+				+0.6