Experiment: m.b. Fusidic 0.003 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_0463 and Echvi_0464 are separated by 41 nucleotides Echvi_0464 and Echvi_0465 are separated by 333 nucleotides
Echvi_0463: Echvi_0463 - Zinc metalloprotease (elastase), at 506,088 to 508,676
_0463
Echvi_0464: Echvi_0464 - Protein of unknown function (DUF2726)., at 508,718 to 509,575
_0464
Echvi_0465: Echvi_0465 - hypothetical protein, at 509,909 to 511,240
_0465
Position (kb) 508
509
510 Strain fitness (log2 ratio) -2
-1
0
1
2
3
4 at 507.743 kb on + strand, within Echvi_0463 at 507.744 kb on - strand, within Echvi_0463 at 507.769 kb on + strand, within Echvi_0463 at 507.793 kb on - strand, within Echvi_0463 at 507.836 kb on + strand, within Echvi_0463 at 507.836 kb on + strand, within Echvi_0463 at 507.837 kb on - strand, within Echvi_0463 at 507.838 kb on + strand, within Echvi_0463 at 507.838 kb on + strand, within Echvi_0463 at 507.839 kb on - strand, within Echvi_0463 at 507.884 kb on + strand, within Echvi_0463 at 507.884 kb on + strand, within Echvi_0463 at 507.884 kb on + strand, within Echvi_0463 at 507.884 kb on + strand, within Echvi_0463 at 507.884 kb on + strand, within Echvi_0463 at 507.884 kb on + strand, within Echvi_0463 at 507.884 kb on + strand, within Echvi_0463 at 507.884 kb on + strand, within Echvi_0463 at 507.885 kb on - strand, within Echvi_0463 at 507.885 kb on - strand, within Echvi_0463 at 507.885 kb on - strand, within Echvi_0463 at 507.885 kb on - strand, within Echvi_0463 at 507.885 kb on - strand, within Echvi_0463 at 507.888 kb on - strand, within Echvi_0463 at 507.990 kb on + strand, within Echvi_0463 at 507.990 kb on + strand, within Echvi_0463 at 507.990 kb on + strand, within Echvi_0463 at 508.013 kb on + strand, within Echvi_0463 at 508.013 kb on + strand, within Echvi_0463 at 508.014 kb on - strand, within Echvi_0463 at 508.017 kb on + strand, within Echvi_0463 at 508.017 kb on + strand, within Echvi_0463 at 508.017 kb on + strand, within Echvi_0463 at 508.017 kb on + strand, within Echvi_0463 at 508.017 kb on + strand, within Echvi_0463 at 508.017 kb on + strand, within Echvi_0463 at 508.018 kb on - strand, within Echvi_0463 at 508.018 kb on - strand, within Echvi_0463 at 508.018 kb on - strand, within Echvi_0463 at 508.018 kb on - strand, within Echvi_0463 at 508.019 kb on + strand, within Echvi_0463 at 508.019 kb on + strand, within Echvi_0463 at 508.019 kb on + strand, within Echvi_0463 at 508.069 kb on + strand, within Echvi_0463 at 508.070 kb on - strand, within Echvi_0463 at 508.104 kb on + strand, within Echvi_0463 at 508.105 kb on - strand, within Echvi_0463 at 508.110 kb on + strand, within Echvi_0463 at 508.110 kb on + strand, within Echvi_0463 at 508.111 kb on - strand, within Echvi_0463 at 508.111 kb on - strand, within Echvi_0463 at 508.140 kb on + strand, within Echvi_0463 at 508.140 kb on + strand, within Echvi_0463 at 508.140 kb on + strand, within Echvi_0463 at 508.140 kb on + strand, within Echvi_0463 at 508.141 kb on - strand, within Echvi_0463 at 508.141 kb on - strand, within Echvi_0463 at 508.141 kb on - strand, within Echvi_0463 at 508.141 kb on - strand, within Echvi_0463 at 508.141 kb on - strand, within Echvi_0463 at 508.141 kb on - strand, within Echvi_0463 at 508.141 kb on - strand, within Echvi_0463 at 508.142 kb on + strand, within Echvi_0463 at 508.143 kb on - strand, within Echvi_0463 at 508.151 kb on + strand, within Echvi_0463 at 508.152 kb on - strand, within Echvi_0463 at 508.157 kb on + strand, within Echvi_0463 at 508.158 kb on - strand, within Echvi_0463 at 508.161 kb on - strand, within Echvi_0463 at 508.165 kb on + strand, within Echvi_0463 at 508.178 kb on - strand, within Echvi_0463 at 508.178 kb on - strand, within Echvi_0463 at 508.179 kb on + strand, within Echvi_0463 at 508.198 kb on + strand, within Echvi_0463 at 508.198 kb on + strand, within Echvi_0463 at 508.198 kb on + strand, within Echvi_0463 at 508.198 kb on + strand, within Echvi_0463 at 508.205 kb on - strand, within Echvi_0463 at 508.208 kb on - strand, within Echvi_0463 at 508.228 kb on + strand, within Echvi_0463 at 508.229 kb on - strand, within Echvi_0463 at 508.259 kb on + strand, within Echvi_0463 at 508.263 kb on + strand, within Echvi_0463 at 508.318 kb on - strand, within Echvi_0463 at 508.372 kb on - strand, within Echvi_0463 at 508.404 kb on + strand, within Echvi_0463 at 508.405 kb on - strand, within Echvi_0463 at 508.409 kb on + strand, within Echvi_0463 at 508.410 kb on - strand, within Echvi_0463 at 508.410 kb on - strand, within Echvi_0463 at 508.410 kb on - strand, within Echvi_0463 at 508.410 kb on - strand, within Echvi_0463 at 508.422 kb on + strand at 508.423 kb on - strand at 508.425 kb on - strand at 508.457 kb on - strand at 508.526 kb on - strand at 508.526 kb on - strand at 508.614 kb on + strand at 508.618 kb on - strand at 508.618 kb on - strand at 508.618 kb on - strand at 508.621 kb on + strand at 508.621 kb on + strand at 508.621 kb on + strand at 508.622 kb on - strand at 508.622 kb on - strand at 508.622 kb on - strand at 508.625 kb on + strand at 508.625 kb on + strand at 508.626 kb on - strand at 508.626 kb on - strand at 508.626 kb on - strand at 508.626 kb on - strand at 508.626 kb on - strand at 508.675 kb on - strand at 508.697 kb on - strand at 508.697 kb on - strand at 508.703 kb on + strand at 508.704 kb on - strand at 508.704 kb on - strand at 508.705 kb on + strand at 508.706 kb on - strand at 508.706 kb on - strand at 508.706 kb on - strand at 508.708 kb on + strand at 508.744 kb on + strand at 508.744 kb on + strand at 508.745 kb on - strand at 508.745 kb on - strand at 508.748 kb on + strand at 508.749 kb on - strand at 508.792 kb on + strand at 508.801 kb on + strand at 508.801 kb on + strand at 508.801 kb on + strand at 508.802 kb on - strand at 508.802 kb on - strand at 508.802 kb on - strand at 508.805 kb on + strand, within Echvi_0464 at 508.806 kb on - strand, within Echvi_0464 at 508.806 kb on - strand, within Echvi_0464 at 508.838 kb on + strand, within Echvi_0464 at 508.838 kb on + strand, within Echvi_0464 at 508.839 kb on - strand, within Echvi_0464 at 508.844 kb on - strand, within Echvi_0464 at 508.844 kb on - strand, within Echvi_0464 at 508.862 kb on + strand, within Echvi_0464 at 508.863 kb on - strand, within Echvi_0464 at 508.880 kb on - strand, within Echvi_0464 at 508.955 kb on + strand, within Echvi_0464 at 508.995 kb on - strand, within Echvi_0464 at 508.995 kb on - strand, within Echvi_0464 at 508.995 kb on - strand, within Echvi_0464 at 508.995 kb on - strand, within Echvi_0464 at 509.026 kb on + strand, within Echvi_0464 at 509.026 kb on + strand, within Echvi_0464 at 509.026 kb on + strand, within Echvi_0464 at 509.026 kb on + strand, within Echvi_0464 at 509.027 kb on - strand, within Echvi_0464 at 509.069 kb on + strand, within Echvi_0464 at 509.078 kb on + strand, within Echvi_0464 at 509.140 kb on - strand, within Echvi_0464 at 509.144 kb on + strand, within Echvi_0464 at 509.145 kb on - strand, within Echvi_0464 at 509.195 kb on - strand, within Echvi_0464 at 509.221 kb on - strand, within Echvi_0464 at 509.225 kb on + strand, within Echvi_0464 at 509.243 kb on + strand, within Echvi_0464 at 509.244 kb on - strand, within Echvi_0464 at 509.259 kb on + strand, within Echvi_0464 at 509.263 kb on - strand, within Echvi_0464 at 509.271 kb on + strand, within Echvi_0464 at 509.271 kb on + strand, within Echvi_0464 at 509.271 kb on + strand, within Echvi_0464 at 509.272 kb on - strand, within Echvi_0464 at 509.272 kb on - strand, within Echvi_0464 at 509.275 kb on + strand, within Echvi_0464 at 509.275 kb on + strand, within Echvi_0464 at 509.275 kb on + strand, within Echvi_0464 at 509.275 kb on + strand, within Echvi_0464 at 509.276 kb on - strand, within Echvi_0464 at 509.366 kb on + strand, within Echvi_0464 at 509.422 kb on + strand, within Echvi_0464 at 509.429 kb on + strand, within Echvi_0464 at 509.434 kb on + strand, within Echvi_0464 at 509.434 kb on + strand, within Echvi_0464 at 509.450 kb on - strand, within Echvi_0464 at 509.489 kb on - strand, within Echvi_0464 at 509.503 kb on - strand at 509.506 kb on - strand at 509.506 kb on - strand at 509.554 kb on - strand at 509.554 kb on - strand at 509.582 kb on - strand at 509.587 kb on + strand at 509.624 kb on + strand at 509.624 kb on + strand at 509.632 kb on + strand at 509.644 kb on + strand at 509.675 kb on + strand at 509.688 kb on + strand at 509.688 kb on + strand at 509.713 kb on + strand at 509.960 kb on - strand at 510.008 kb on + strand at 510.011 kb on - strand at 510.032 kb on + strand at 510.033 kb on - strand at 510.033 kb on - strand at 510.065 kb on + strand, within Echvi_0465 at 510.066 kb on - strand, within Echvi_0465 at 510.109 kb on - strand, within Echvi_0465 at 510.133 kb on + strand, within Echvi_0465 at 510.134 kb on - strand, within Echvi_0465 at 510.185 kb on - strand, within Echvi_0465 at 510.185 kb on - strand, within Echvi_0465 at 510.206 kb on - strand, within Echvi_0465 at 510.257 kb on - strand, within Echvi_0465 at 510.257 kb on - strand, within Echvi_0465 at 510.257 kb on - strand, within Echvi_0465 at 510.257 kb on - strand, within Echvi_0465 at 510.257 kb on - strand, within Echvi_0465 at 510.306 kb on - strand, within Echvi_0465 at 510.383 kb on - strand, within Echvi_0465 at 510.436 kb on - strand, within Echvi_0465 at 510.436 kb on - strand, within Echvi_0465 at 510.464 kb on - strand, within Echvi_0465 at 510.464 kb on - strand, within Echvi_0465 at 510.545 kb on - strand, within Echvi_0465 at 510.550 kb on - strand, within Echvi_0465 at 510.554 kb on - strand, within Echvi_0465
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Fusidic 0.003 mg/ml remove 507,743 + Echvi_0463 0.64 -0.5 507,744 - Echvi_0463 0.64 +1.6 507,769 + Echvi_0463 0.65 +0.1 507,793 - Echvi_0463 0.66 -0.2 507,836 + Echvi_0463 0.68 +2.0 507,836 + Echvi_0463 0.68 -0.2 507,837 - Echvi_0463 0.68 -1.4 507,838 + Echvi_0463 0.68 +1.2 507,838 + Echvi_0463 0.68 -0.5 507,839 - Echvi_0463 0.68 -1.1 507,884 + Echvi_0463 0.69 +2.7 507,884 + Echvi_0463 0.69 +1.6 507,884 + Echvi_0463 0.69 +0.9 507,884 + Echvi_0463 0.69 +1.5 507,884 + Echvi_0463 0.69 -0.7 507,884 + Echvi_0463 0.69 +0.6 507,884 + Echvi_0463 0.69 -2.6 507,884 + Echvi_0463 0.69 +0.8 507,885 - Echvi_0463 0.69 +1.0 507,885 - Echvi_0463 0.69 -1.2 507,885 - Echvi_0463 0.69 +1.1 507,885 - Echvi_0463 0.69 +1.0 507,885 - Echvi_0463 0.69 -0.9 507,888 - Echvi_0463 0.70 -0.1 507,990 + Echvi_0463 0.73 -0.0 507,990 + Echvi_0463 0.73 -0.2 507,990 + Echvi_0463 0.73 -0.8 508,013 + Echvi_0463 0.74 -2.0 508,013 + Echvi_0463 0.74 +1.3 508,014 - Echvi_0463 0.74 -1.1 508,017 + Echvi_0463 0.75 -0.6 508,017 + Echvi_0463 0.75 +0.1 508,017 + Echvi_0463 0.75 -0.6 508,017 + Echvi_0463 0.75 +1.7 508,017 + Echvi_0463 0.75 -0.4 508,017 + Echvi_0463 0.75 +0.8 508,018 - Echvi_0463 0.75 -0.5 508,018 - Echvi_0463 0.75 +0.1 508,018 - Echvi_0463 0.75 -0.3 508,018 - Echvi_0463 0.75 -0.3 508,019 + Echvi_0463 0.75 -0.3 508,019 + Echvi_0463 0.75 -0.5 508,019 + Echvi_0463 0.75 +0.3 508,069 + Echvi_0463 0.77 -0.5 508,070 - Echvi_0463 0.77 -0.0 508,104 + Echvi_0463 0.78 +0.3 508,105 - Echvi_0463 0.78 -1.0 508,110 + Echvi_0463 0.78 -0.2 508,110 + Echvi_0463 0.78 -0.9 508,111 - Echvi_0463 0.78 -0.0 508,111 - Echvi_0463 0.78 -0.5 508,140 + Echvi_0463 0.79 -0.7 508,140 + Echvi_0463 0.79 +0.5 508,140 + Echvi_0463 0.79 -0.7 508,140 + Echvi_0463 0.79 -2.1 508,141 - Echvi_0463 0.79 -0.2 508,141 - Echvi_0463 0.79 -0.0 508,141 - Echvi_0463 0.79 +1.0 508,141 - Echvi_0463 0.79 -1.8 508,141 - Echvi_0463 0.79 -0.1 508,141 - Echvi_0463 0.79 +0.2 508,141 - Echvi_0463 0.79 +0.3 508,142 + Echvi_0463 0.79 -0.0 508,143 - Echvi_0463 0.79 +0.1 508,151 + Echvi_0463 0.80 +0.3 508,152 - Echvi_0463 0.80 +1.0 508,157 + Echvi_0463 0.80 -0.7 508,158 - Echvi_0463 0.80 +0.7 508,161 - Echvi_0463 0.80 -1.5 508,165 + Echvi_0463 0.80 +0.2 508,178 - Echvi_0463 0.81 -0.3 508,178 - Echvi_0463 0.81 -0.0 508,179 + Echvi_0463 0.81 -0.3 508,198 + Echvi_0463 0.81 -0.5 508,198 + Echvi_0463 0.81 +1.0 508,198 + Echvi_0463 0.81 -1.0 508,198 + Echvi_0463 0.81 -1.2 508,205 - Echvi_0463 0.82 +1.1 508,208 - Echvi_0463 0.82 -1.7 508,228 + Echvi_0463 0.83 +0.7 508,229 - Echvi_0463 0.83 -0.3 508,259 + Echvi_0463 0.84 -0.3 508,263 + Echvi_0463 0.84 -0.6 508,318 - Echvi_0463 0.86 -1.5 508,372 - Echvi_0463 0.88 +0.3 508,404 + Echvi_0463 0.89 +3.2 508,405 - Echvi_0463 0.89 -0.7 508,409 + Echvi_0463 0.90 +1.0 508,410 - Echvi_0463 0.90 +1.6 508,410 - Echvi_0463 0.90 +0.5 508,410 - Echvi_0463 0.90 +0.4 508,410 - Echvi_0463 0.90 -0.6 508,422 + +1.4 508,423 - +0.7 508,425 - -0.8 508,457 - -0.1 508,526 - +0.6 508,526 - +2.0 508,614 + +0.3 508,618 - -0.6 508,618 - +1.0 508,618 - -0.3 508,621 + -0.3 508,621 + +0.8 508,621 + -1.5 508,622 - +1.0 508,622 - -0.0 508,622 - -0.1 508,625 + +0.4 508,625 + +1.4 508,626 - +0.0 508,626 - +0.7 508,626 - +1.2 508,626 - -0.8 508,626 - -0.7 508,675 - +0.9 508,697 - -0.4 508,697 - -0.2 508,703 + -1.1 508,704 - +0.8 508,704 - +4.0 508,705 + -0.7 508,706 - -0.4 508,706 - -0.1 508,706 - -1.5 508,708 + +0.8 508,744 + +0.7 508,744 + -1.6 508,745 - +0.7 508,745 - +1.3 508,748 + -0.4 508,749 - -0.0 508,792 + -0.6 508,801 + -0.4 508,801 + -0.2 508,801 + -0.3 508,802 - +1.4 508,802 - -0.0 508,802 - -0.5 508,805 + Echvi_0464 0.10 +0.8 508,806 - Echvi_0464 0.10 -0.3 508,806 - Echvi_0464 0.10 -0.3 508,838 + Echvi_0464 0.14 -0.3 508,838 + Echvi_0464 0.14 -1.2 508,839 - Echvi_0464 0.14 +0.3 508,844 - Echvi_0464 0.15 +0.5 508,844 - Echvi_0464 0.15 +1.1 508,862 + Echvi_0464 0.17 +1.1 508,863 - Echvi_0464 0.17 -1.4 508,880 - Echvi_0464 0.19 -0.0 508,955 + Echvi_0464 0.28 -0.1 508,995 - Echvi_0464 0.32 -0.7 508,995 - Echvi_0464 0.32 -1.4 508,995 - Echvi_0464 0.32 -0.4 508,995 - Echvi_0464 0.32 +0.5 509,026 + Echvi_0464 0.36 -0.3 509,026 + Echvi_0464 0.36 +1.0 509,026 + Echvi_0464 0.36 +0.2 509,026 + Echvi_0464 0.36 +1.1 509,027 - Echvi_0464 0.36 +0.8 509,069 + Echvi_0464 0.41 -0.2 509,078 + Echvi_0464 0.42 -0.6 509,140 - Echvi_0464 0.49 +0.8 509,144 + Echvi_0464 0.50 +0.3 509,145 - Echvi_0464 0.50 +0.4 509,195 - Echvi_0464 0.56 -0.7 509,221 - Echvi_0464 0.59 +0.5 509,225 + Echvi_0464 0.59 +0.1 509,243 + Echvi_0464 0.61 -0.5 509,244 - Echvi_0464 0.61 -0.3 509,259 + Echvi_0464 0.63 +0.3 509,263 - Echvi_0464 0.64 +1.2 509,271 + Echvi_0464 0.64 -1.7 509,271 + Echvi_0464 0.64 +0.3 509,271 + Echvi_0464 0.64 +0.0 509,272 - Echvi_0464 0.65 +1.0 509,272 - Echvi_0464 0.65 -0.1 509,275 + Echvi_0464 0.65 +0.7 509,275 + Echvi_0464 0.65 -0.2 509,275 + Echvi_0464 0.65 +1.6 509,275 + Echvi_0464 0.65 -0.3 509,276 - Echvi_0464 0.65 +1.2 509,366 + Echvi_0464 0.76 -0.5 509,422 + Echvi_0464 0.82 +0.7 509,429 + Echvi_0464 0.83 -1.0 509,434 + Echvi_0464 0.83 +1.1 509,434 + Echvi_0464 0.83 +2.2 509,450 - Echvi_0464 0.85 -1.0 509,489 - Echvi_0464 0.90 -0.8 509,503 - -0.9 509,506 - -0.7 509,506 - -1.0 509,554 - +0.7 509,554 - +0.0 509,582 - -0.4 509,587 + -0.0 509,624 + -0.3 509,624 + +0.2 509,632 + -0.2 509,644 + -0.5 509,675 + -1.6 509,688 + +0.3 509,688 + -0.3 509,713 + -0.3 509,960 - -0.6 510,008 + -0.1 510,011 - +1.1 510,032 + -0.8 510,033 - -0.6 510,033 - -1.8 510,065 + Echvi_0465 0.12 +2.0 510,066 - Echvi_0465 0.12 -1.2 510,109 - Echvi_0465 0.15 -0.0 510,133 + Echvi_0465 0.17 -0.2 510,134 - Echvi_0465 0.17 -0.4 510,185 - Echvi_0465 0.21 -0.3 510,185 - Echvi_0465 0.21 +0.4 510,206 - Echvi_0465 0.22 -0.9 510,257 - Echvi_0465 0.26 +0.4 510,257 - Echvi_0465 0.26 -1.1 510,257 - Echvi_0465 0.26 -1.2 510,257 - Echvi_0465 0.26 +1.1 510,257 - Echvi_0465 0.26 -0.3 510,306 - Echvi_0465 0.30 +0.6 510,383 - Echvi_0465 0.36 -0.0 510,436 - Echvi_0465 0.40 -0.5 510,436 - Echvi_0465 0.40 -0.0 510,464 - Echvi_0465 0.42 -0.2 510,464 - Echvi_0465 0.42 -0.1 510,545 - Echvi_0465 0.48 +0.3 510,550 - Echvi_0465 0.48 +1.3 510,554 - Echvi_0465 0.48 +0.0
Or see this region's nucleotide sequence