Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_3538

Experiment: m.b. Fusidic 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Fusidic 0.001 mg/ml
4,191,693	+				+0.2
4,191,778	+				-0.5
4,191,779	-				-1.2
4,191,781	+				+0.1
4,191,781	+				+1.4
4,191,781	+				+1.0
4,191,781	+				+0.5
4,191,782	-				+0.8
4,191,783	+				-1.0
4,191,885	+		Echvi_3537	0.19	+0.0
4,191,886	-		Echvi_3537	0.19	-0.9
4,191,973	-		Echvi_3537	0.34	+0.1
4,191,973	-		Echvi_3537	0.34	-1.4
4,192,028	+		Echvi_3537	0.44	-0.5
4,192,098	+		Echvi_3537	0.57	+0.2
4,192,126	+		Echvi_3537	0.62	+0.9
4,192,127	-		Echvi_3537	0.62	+0.0
4,192,138	+		Echvi_3537	0.64	+1.8
4,192,138	+		Echvi_3537	0.64	-1.0
4,192,139	-		Echvi_3537	0.64	+0.1
4,192,162	-		Echvi_3537	0.68	-0.9
4,192,234	-		Echvi_3537	0.81	+0.1
4,192,234	-		Echvi_3537	0.81	+0.1
4,192,234	-		Echvi_3537	0.81	-0.1
4,192,234	-		Echvi_3537	0.81	-1.5
4,192,275	-		Echvi_3537	0.88	-0.5
4,192,308	+				+0.3
4,192,308	+				+0.1
4,192,309	-				+1.2
4,192,490	+				+1.0
4,192,560	-				-0.2
4,192,566	+				-0.2
4,192,566	+				+0.1
4,192,566	+				-0.0
4,192,567	-				-0.9
4,192,567	-				-1.0
4,192,567	-				-0.6
4,192,570	+				+0.1
4,192,573	+				-0.3
4,192,573	+				+2.0
4,192,574	-				-0.5
4,192,574	-				+0.7
4,192,574	-				+0.1
4,192,574	-				-0.7
4,192,574	-				-0.6
4,192,574	-				+0.2
4,192,579	+				+0.2
4,192,580	-				+1.3
4,192,581	+				-1.7
4,192,582	-				-0.2
4,192,626	+				-0.6
4,192,641	-				+2.2
4,192,652	+				+0.1
4,192,652	+				+0.7
4,192,652	+				+0.9
4,192,653	-				+1.6
4,192,653	-				-0.2
4,192,653	-				+2.6
4,192,653	-				-0.9
4,192,653	-				+0.4
4,192,660	+				-0.6
4,192,660	+				+0.2
4,192,661	-				-0.4
4,192,661	-				+0.1
4,192,676	+				-0.1
4,192,702	+				+1.0
4,192,702	+				-0.3
4,192,709	-				-0.7
4,192,709	-				+0.2
4,192,734	+		Echvi_3538	0.12	+0.2
4,192,735	-		Echvi_3538	0.12	+1.1
4,192,775	-		Echvi_3538	0.22	+0.5
4,192,832	-		Echvi_3538	0.34	-0.5
4,192,910	+		Echvi_3538	0.52	-1.3
4,192,916	-		Echvi_3538	0.54	-0.4
4,192,916	-		Echvi_3538	0.54	-1.0
4,192,952	+		Echvi_3538	0.62	+1.1
4,192,952	+		Echvi_3538	0.62	-0.3
4,192,952	+		Echvi_3538	0.62	+2.3
4,192,953	-		Echvi_3538	0.62	+0.9
4,192,953	-		Echvi_3538	0.62	-0.2
4,192,953	-		Echvi_3538	0.62	+0.4
4,192,962	+		Echvi_3538	0.64	+0.5
4,193,013	-		Echvi_3538	0.76	+0.4
4,193,013	-		Echvi_3538	0.76	-0.5
4,193,013	-		Echvi_3538	0.76	-0.8
4,193,050	+		Echvi_3538	0.84	+2.6
4,193,063	-		Echvi_3538	0.87	-3.1
4,193,119	-				+1.2
4,193,127	+				+0.1
4,193,137	+				+2.0
4,193,137	+				+0.8
4,193,138	-				+0.1
4,193,138	-				-0.3
4,193,138	-				+2.0
4,193,161	-				+0.7
4,193,178	+				-1.3
4,193,178	+				+0.7
4,193,251	+				+0.5
4,193,295	+				-0.2
4,193,296	-				-0.8
4,193,352	+				-0.1
4,193,353	-				-0.1
4,193,353	-				+0.6
4,193,353	-				+0.4
4,193,354	+				+0.3
4,193,387	+				-1.7
4,193,397	+		Echvi_3539	0.11	-0.3
4,193,397	+		Echvi_3539	0.11	+0.5
4,193,398	-		Echvi_3539	0.11	-0.9
4,193,398	-		Echvi_3539	0.11	-0.9
4,193,400	-		Echvi_3539	0.11	+0.6
4,193,400	-		Echvi_3539	0.11	+0.3
4,193,458	-		Echvi_3539	0.18	-0.3
4,193,512	-		Echvi_3539	0.24	-2.0
4,193,512	-		Echvi_3539	0.24	-0.7
4,193,608	-		Echvi_3539	0.35	-0.4
4,193,609	+		Echvi_3539	0.35	-1.1
4,193,610	-		Echvi_3539	0.35	-0.1
4,193,613	+		Echvi_3539	0.35	-0.4
4,193,613	+		Echvi_3539	0.35	+0.5
4,193,613	+		Echvi_3539	0.35	-1.1
4,193,614	-		Echvi_3539	0.36	+0.0
4,193,637	+		Echvi_3539	0.38	-0.0
4,193,670	+		Echvi_3539	0.42	+0.5
4,193,678	-		Echvi_3539	0.43	+1.6
4,193,721	+		Echvi_3539	0.48	+1.0
4,193,721	+		Echvi_3539	0.48	+0.5
4,193,721	+		Echvi_3539	0.48	-0.8
4,193,722	-		Echvi_3539	0.48	+1.1
4,193,725	+		Echvi_3539	0.48	+0.0
4,193,729	+		Echvi_3539	0.49	+1.3
4,193,730	-		Echvi_3539	0.49	-0.5
4,193,778	+		Echvi_3539	0.54	+0.0
4,193,828	+		Echvi_3539	0.60	+0.1
4,193,829	-		Echvi_3539	0.60	+0.5
4,193,894	-		Echvi_3539	0.67	+0.6
4,193,943	+		Echvi_3539	0.73	-0.6
4,193,943	+		Echvi_3539	0.73	-0.5
4,193,946	-		Echvi_3539	0.73	-0.1
4,193,946	-		Echvi_3539	0.73	+0.2
4,193,948	+		Echvi_3539	0.73	-1.6
4,193,978	-		Echvi_3539	0.77	-1.1
4,194,051	+		Echvi_3539	0.85	-0.9
4,194,058	+		Echvi_3539	0.86	+1.0
4,194,089	+		Echvi_3539	0.89	-0.3
4,194,089	+		Echvi_3539	0.89	+0.9
4,194,104	+				-0.6
4,194,105	-				+0.0
4,194,110	+				-0.6