Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_2513

Experiment: m.b. Fusidic 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Fusidic 0.001 mg/ml
2,984,300	+		Echvi_2512	0.38	-0.2
2,984,302	+		Echvi_2512	0.38	-0.6
2,984,302	+		Echvi_2512	0.38	+0.1
2,984,302	+		Echvi_2512	0.38	-0.2
2,984,303	-		Echvi_2512	0.38	-0.5
2,984,303	-		Echvi_2512	0.38	+0.2
2,984,303	-		Echvi_2512	0.38	-0.4
2,984,323	+		Echvi_2512	0.40	-0.1
2,984,340	-		Echvi_2512	0.42	+1.1
2,984,346	-		Echvi_2512	0.42	-0.1
2,984,346	-		Echvi_2512	0.42	-0.4
2,984,346	-		Echvi_2512	0.42	-1.2
2,984,631	+		Echvi_2512	0.70	+0.9
2,984,632	-		Echvi_2512	0.70	+2.1
2,984,632	-		Echvi_2512	0.70	+0.1
2,984,632	-		Echvi_2512	0.70	+0.2
2,984,695	-		Echvi_2512	0.76	-0.3
2,984,804	-		Echvi_2512	0.87	-0.6
2,984,970	+				-0.2
2,984,970	+				+0.2
2,984,970	+				+0.8
2,984,971	-				-0.6
2,984,971	-				-1.6
2,984,971	-				+1.7
2,985,022	-				-1.1
2,985,056	+				+1.5
2,985,070	+				+0.2
2,985,070	+				+0.7
2,985,076	+				+0.3
2,985,077	-				-0.9
2,985,077	-				-0.5
2,985,077	-				-0.8
2,985,079	+				+0.8
2,985,106	+				-0.3
2,985,107	-				-1.1
2,985,112	+				+2.7
2,985,150	+				+0.7
2,985,277	+				+1.0
2,985,342	+		Echvi_2513	0.14	-1.9
2,985,388	-		Echvi_2513	0.19	-1.6
2,985,388	-		Echvi_2513	0.19	+1.7
2,985,388	-		Echvi_2513	0.19	+0.2
2,985,435	-		Echvi_2513	0.25	-0.1
2,985,435	-		Echvi_2513	0.25	-0.7
2,985,539	+		Echvi_2513	0.38	-1.5
2,985,630	-		Echvi_2513	0.50	-0.3
2,985,635	+		Echvi_2513	0.50	+0.1
2,985,635	+		Echvi_2513	0.50	-1.8
2,985,654	+		Echvi_2513	0.53	-1.3
2,985,655	-		Echvi_2513	0.53	-1.1
2,985,655	-		Echvi_2513	0.53	-0.7
2,985,655	-		Echvi_2513	0.53	+1.7
2,985,676	+		Echvi_2513	0.56	-0.9
2,985,697	-		Echvi_2513	0.58	-0.8
2,985,697	-		Echvi_2513	0.58	-0.7
2,985,707	+		Echvi_2513	0.59	-0.7
2,985,708	-		Echvi_2513	0.60	-1.9
2,985,834	-		Echvi_2513	0.75	-0.1
2,985,864	+		Echvi_2513	0.79	-0.9
2,985,865	-		Echvi_2513	0.79	+0.3
2,985,878	+		Echvi_2513	0.81	-0.7
2,985,906	-		Echvi_2513	0.85	-1.1
2,985,922	-		Echvi_2513	0.87	-0.7
2,985,939	+		Echvi_2513	0.89	-1.3
2,986,071	-				+0.9
2,986,095	-				+0.1
2,986,100	-				-0.3
2,986,101	+				-1.1
2,986,102	-				+0.5
2,986,102	-				+1.2
2,986,102	-				-0.7
2,986,228	-				+0.8
2,986,228	-				+0.5
2,986,234	+				-0.3
2,986,237	+				+1.1
2,986,237	+				-0.4
2,986,238	-				-0.5
2,986,252	+				-0.3
2,986,260	-				+0.3
2,986,261	+				-0.3
2,986,501	-		Echvi_2514	0.44	-0.6
2,986,549	+		Echvi_2514	0.52	-0.5
2,986,625	-		Echvi_2514	0.65	-0.3
2,986,638	-		Echvi_2514	0.67	-1.2
2,986,647	+		Echvi_2514	0.69	-0.8
2,986,653	+		Echvi_2514	0.70	-0.7
2,986,656	+		Echvi_2514	0.70	-0.0
2,986,755	+		Echvi_2514	0.87	-1.0
2,986,755	+		Echvi_2514	0.87	+1.7
2,986,825	+				+0.7
2,986,825	+				-0.1
2,986,855	+				+0.9
2,986,856	-				-0.9
2,986,914	-		Echvi_2515	0.11	+1.0