Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_2249

Experiment: m.b. Fusidic 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Fusidic 0.001 mg/ml
2,668,125	+		Echvi_2247	0.77	+0.0
2,668,125	+		Echvi_2247	0.77	-0.9
2,668,125	+		Echvi_2247	0.77	+0.1
2,668,125	+		Echvi_2247	0.77	-0.9
2,668,136	-		Echvi_2247	0.79	-0.4
2,668,143	+		Echvi_2247	0.80	+0.5
2,668,202	-		Echvi_2247	0.89	-1.1
2,668,202	-		Echvi_2247	0.89	+0.4
2,668,202	-		Echvi_2247	0.89	-0.5
2,668,207	-				+2.0
2,668,308	-				-0.3
2,668,333	+				-1.6
2,668,408	+		Echvi_2248	0.24	-0.7
2,668,408	+		Echvi_2248	0.24	-1.1
2,668,411	-		Echvi_2248	0.24	-0.8
2,668,432	-		Echvi_2248	0.29	+0.5
2,668,559	+		Echvi_2248	0.54	-0.6
2,668,581	+		Echvi_2248	0.59	-0.6
2,668,656	+		Echvi_2248	0.74	-1.1
2,668,673	-		Echvi_2248	0.78	+0.1
2,668,673	-		Echvi_2248	0.78	-0.1
2,668,676	-		Echvi_2248	0.78	+2.3
2,668,676	-		Echvi_2248	0.78	-1.0
2,668,706	+		Echvi_2248	0.84	+0.6
2,668,706	+		Echvi_2248	0.84	+0.3
2,668,707	-		Echvi_2248	0.85	+0.5
2,668,709	-		Echvi_2248	0.85	+0.7
2,668,769	+				-0.4
2,668,770	-				-0.5
2,668,770	-				-0.2
2,668,770	-				+0.4
2,668,785	-				+1.1
2,668,790	+				-1.8
2,668,795	+				+1.7
2,668,880	+				+1.4
2,668,881	-				+0.4
2,668,881	-				+1.0
2,668,884	-				-0.0
2,668,884	-				-0.8
2,668,915	+				-2.0
2,668,916	-				-0.2
2,668,916	-				+0.4
2,668,995	+				-1.0
2,668,996	-				+1.6
2,669,001	+				+0.4
2,669,097	+		Echvi_2249	0.34	-1.6
2,669,140	-		Echvi_2249	0.52	-0.6
2,669,249	+				+0.2
2,669,249	+				-0.2
2,669,250	-				-0.2
2,669,250	-				+0.6
2,669,295	-		Echvi_2250	0.22	-0.6
2,669,343	+		Echvi_2250	0.46	-0.6
2,669,343	+		Echvi_2250	0.46	-2.2
2,669,343	+		Echvi_2250	0.46	-0.2
2,669,343	+		Echvi_2250	0.46	-0.4
2,669,344	-		Echvi_2250	0.47	-0.2
2,669,344	-		Echvi_2250	0.47	-0.2
2,669,344	-		Echvi_2250	0.47	-0.5
2,669,344	-		Echvi_2250	0.47	+0.2
2,669,344	-		Echvi_2250	0.47	+0.2
2,669,344	-		Echvi_2250	0.47	+1.1
2,669,344	-		Echvi_2250	0.47	+0.5
2,669,344	-		Echvi_2250	0.47	-0.0
2,669,345	+		Echvi_2250	0.47	+0.8
2,669,345	+		Echvi_2250	0.47	-0.0
2,669,345	+		Echvi_2250	0.47	-2.8
2,669,346	-		Echvi_2250	0.48	-0.5
2,669,346	-		Echvi_2250	0.48	-0.5
2,669,357	-		Echvi_2250	0.53	-1.4
2,669,386	+		Echvi_2250	0.68	+0.7
2,669,386	+		Echvi_2250	0.68	+0.4
2,669,424	-		Echvi_2250	0.87	-0.4
2,669,424	-		Echvi_2250	0.87	-0.2
2,669,424	-		Echvi_2250	0.87	+0.3
2,669,456	-				-0.2
2,669,535	+				-0.6
2,669,536	-				-0.6
2,669,572	+				-0.4
2,669,573	-				+0.5
2,669,573	-				+0.7
2,669,575	+				+0.6
2,669,575	+				-0.9
2,669,575	+				-0.2
2,669,576	-				+0.1
2,669,576	-				-1.9
2,669,576	-				-0.5
2,669,576	-				-0.1
2,669,631	-				-0.2
2,669,678	+				+0.4
2,669,678	+				-1.2
2,669,684	+				-0.1
2,669,684	+				+1.4
2,669,685	-				+0.3
2,669,685	-				+0.2
2,669,693	+				+0.1
2,669,698	-				+0.0
2,669,709	+				-0.7
2,669,710	-				+0.2
2,669,743	+				-2.2
2,669,776	-		Echvi_2251	0.14	-0.4
2,669,783	+		Echvi_2251	0.18	-0.1
2,669,792	+		Echvi_2251	0.23	+0.3
2,669,795	+		Echvi_2251	0.24	+0.2
2,669,795	+		Echvi_2251	0.24	-0.0
2,669,796	-		Echvi_2251	0.25	-0.0
2,669,796	-		Echvi_2251	0.25	+0.3
2,669,812	+		Echvi_2251	0.34	-0.5
2,669,812	+		Echvi_2251	0.34	+0.1
2,669,812	+		Echvi_2251	0.34	+0.7
2,669,812	+		Echvi_2251	0.34	-0.3
2,669,812	+		Echvi_2251	0.34	+0.8
2,669,812	+		Echvi_2251	0.34	-0.2
2,669,813	-		Echvi_2251	0.34	+0.6
2,669,813	-		Echvi_2251	0.34	+0.4
2,669,813	-		Echvi_2251	0.34	-0.4
2,669,813	-		Echvi_2251	0.34	-2.7
2,669,815	-				+0.1
2,669,815	-		Echvi_2251	0.36	+2.3
2,669,881	-		Echvi_2251	0.73	-0.6
2,669,881	-		Echvi_2251	0.73	+0.4
2,669,893	-		Echvi_2251	0.80	+0.2
2,669,893	-		Echvi_2251	0.80	+1.7
2,669,926	+				-0.1
2,669,926	+				-0.9
2,669,926	+				+0.1
2,670,014	-				-2.0
2,670,023	+				-1.0
2,670,024	-				+0.1
2,670,098	+				+1.7
2,670,128	-				-1.0
2,670,157	+		Echvi_2252	0.10	-1.1