Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1752

Experiment: m.b. Fusidic 0.001 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Fusidic 0.001 mg/ml
2,062,418	-				+0.3
2,062,455	-				-0.1
2,062,589	+		Echvi_1751	0.13	+1.3
2,062,589	+		Echvi_1751	0.13	+1.8
2,062,685	+		Echvi_1751	0.25	-0.7
2,062,685	+		Echvi_1751	0.25	+0.9
2,062,685	+		Echvi_1751	0.25	-0.8
2,062,695	+		Echvi_1751	0.26	+0.2
2,062,696	-		Echvi_1751	0.26	-0.1
2,062,704	-		Echvi_1751	0.27	+0.8
2,062,834	+		Echvi_1751	0.43	-1.8
2,062,966	-		Echvi_1751	0.60	+0.0
2,063,086	-		Echvi_1751	0.75	-1.5
2,063,086	-		Echvi_1751	0.75	+1.8
2,063,121	+		Echvi_1751	0.79	+0.4
2,063,121	+		Echvi_1751	0.79	-0.6
2,063,210	+				-0.2
2,063,211	-				-1.1
2,063,211	-				+0.9
2,063,211	-				-0.0
2,063,225	+				+0.8
2,063,225	+				-0.2
2,063,226	-				-0.1
2,063,226	-				-2.6
2,063,230	-				+1.8
2,063,260	+				-0.7
2,063,261	-				+0.0
2,063,261	-				+1.2
2,063,266	+				-0.7
2,063,267	-				-0.4
2,063,267	-				-0.2
2,063,267	-				+1.8
2,063,267	-				+0.2
2,063,267	-				+0.5
2,063,269	-				-0.1
2,063,297	-				-0.4
2,063,304	+				+1.2
2,063,370	+				-0.4
2,063,371	-				+0.4
2,063,371	-				-0.1
2,063,470	+		Echvi_1752	0.29	+0.2
2,063,520	+		Echvi_1752	0.50	-0.4
2,063,521	-		Echvi_1752	0.51	+0.4
2,063,590	+		Echvi_1752	0.81	-0.7
2,063,591	-		Echvi_1752	0.81	-0.3
2,063,604	+		Echvi_1752	0.87	-0.5
2,063,605	-		Echvi_1752	0.87	-0.7
2,063,605	-		Echvi_1752	0.87	+0.8
2,063,717	+				-0.0
2,063,738	+				+0.3
2,063,799	+				-0.9
2,063,837	+				+0.4
2,063,926	+				-0.1
2,063,926	+				+0.2
2,063,927	-				+0.0
2,063,927	-				+0.8
2,063,927	-				+0.8
2,063,989	+				-0.8
2,064,095	+				+1.1