Experiment: m.b. Fusidic 0.001 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_0182 and Echvi_0183 overlap by 13 nucleotides Echvi_0183 and Echvi_0184 are separated by 54 nucleotides
Echvi_0182: Echvi_0182 - Mg2+ transporter (mgtE), at 199,344 to 200,711
_0182
Echvi_0183: Echvi_0183 - dimethyladenosine transferase, at 200,699 to 201,481
_0183
Echvi_0184: Echvi_0184 - Leucyl aminopeptidase, at 201,536 to 202,972
_0184
Position (kb) 200
201
202 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 200.756 kb on + strand at 200.756 kb on + strand at 200.757 kb on - strand at 200.821 kb on + strand, within Echvi_0183 at 200.854 kb on + strand, within Echvi_0183 at 200.946 kb on - strand, within Echvi_0183 at 200.991 kb on + strand, within Echvi_0183 at 200.991 kb on + strand, within Echvi_0183 at 200.996 kb on + strand, within Echvi_0183 at 200.997 kb on - strand, within Echvi_0183 at 200.997 kb on - strand, within Echvi_0183 at 201.036 kb on + strand, within Echvi_0183 at 201.036 kb on + strand, within Echvi_0183 at 201.036 kb on + strand, within Echvi_0183 at 201.037 kb on - strand, within Echvi_0183 at 201.157 kb on + strand, within Echvi_0183 at 201.182 kb on - strand, within Echvi_0183 at 201.183 kb on + strand, within Echvi_0183 at 201.184 kb on - strand, within Echvi_0183 at 201.239 kb on - strand, within Echvi_0183 at 201.249 kb on - strand, within Echvi_0183 at 201.371 kb on + strand, within Echvi_0183 at 201.485 kb on + strand at 201.503 kb on - strand at 201.533 kb on + strand at 201.533 kb on + strand at 201.533 kb on + strand at 201.533 kb on + strand at 201.534 kb on - strand at 201.535 kb on + strand at 201.535 kb on + strand at 201.535 kb on + strand at 201.535 kb on + strand at 201.535 kb on + strand at 201.536 kb on - strand at 201.536 kb on - strand at 201.549 kb on + strand at 201.558 kb on + strand at 201.558 kb on + strand at 201.601 kb on + strand at 201.601 kb on + strand at 201.601 kb on + strand at 201.602 kb on - strand at 201.630 kb on + strand at 201.636 kb on + strand at 201.636 kb on + strand at 201.640 kb on + strand at 201.640 kb on + strand at 201.640 kb on + strand at 201.641 kb on - strand at 201.643 kb on + strand at 201.662 kb on - strand at 201.672 kb on + strand at 201.672 kb on + strand at 201.685 kb on + strand, within Echvi_0184 at 202.052 kb on + strand, within Echvi_0184 at 202.053 kb on - strand, within Echvi_0184 at 202.053 kb on - strand, within Echvi_0184 at 202.281 kb on - strand, within Echvi_0184 at 202.298 kb on - strand, within Echvi_0184 at 202.393 kb on - strand, within Echvi_0184 at 202.448 kb on + strand, within Echvi_0184
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Fusidic 0.001 mg/ml remove 200,756 + +0.1 200,756 + -2.0 200,757 - -2.2 200,821 + Echvi_0183 0.16 +1.7 200,854 + Echvi_0183 0.20 +0.5 200,946 - Echvi_0183 0.32 -1.2 200,991 + Echvi_0183 0.37 -0.3 200,991 + Echvi_0183 0.37 -1.5 200,996 + Echvi_0183 0.38 -2.2 200,997 - Echvi_0183 0.38 -1.7 200,997 - Echvi_0183 0.38 -1.7 201,036 + Echvi_0183 0.43 +0.1 201,036 + Echvi_0183 0.43 -1.3 201,036 + Echvi_0183 0.43 -1.5 201,037 - Echvi_0183 0.43 -2.6 201,157 + Echvi_0183 0.58 -1.7 201,182 - Echvi_0183 0.62 -0.9 201,183 + Echvi_0183 0.62 -1.8 201,184 - Echvi_0183 0.62 +0.1 201,239 - Echvi_0183 0.69 -1.7 201,249 - Echvi_0183 0.70 +0.0 201,371 + Echvi_0183 0.86 -0.8 201,485 + -2.2 201,503 - -3.1 201,533 + -0.2 201,533 + -0.6 201,533 + -0.4 201,533 + +0.5 201,534 - +0.1 201,535 + -1.2 201,535 + +0.5 201,535 + +0.5 201,535 + +0.5 201,535 + -1.2 201,536 - -2.4 201,536 - -1.3 201,549 + +0.3 201,558 + +0.6 201,558 + -0.2 201,601 + -1.6 201,601 + +3.7 201,601 + +0.5 201,602 - -1.2 201,630 + +1.5 201,636 + -0.3 201,636 + +0.9 201,640 + +1.3 201,640 + -1.3 201,640 + +0.1 201,641 - -0.2 201,643 + -0.3 201,662 - +0.3 201,672 + -2.4 201,672 + +0.9 201,685 + Echvi_0184 0.10 -0.0 202,052 + Echvi_0184 0.36 +0.1 202,053 - Echvi_0184 0.36 -0.6 202,053 - Echvi_0184 0.36 -0.3 202,281 - Echvi_0184 0.52 +0.1 202,298 - Echvi_0184 0.53 -2.1 202,393 - Echvi_0184 0.60 +0.9 202,448 + Echvi_0184 0.63 +1.5
Or see this region's nucleotide sequence