Experiment: m.b. benzoic 0.58 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_4636 and Echvi_4637 are separated by 73 nucleotides Echvi_4637 and Echvi_4638 are separated by 128 nucleotides
Echvi_4636: Echvi_4636 - lipid-A-disaccharide synthase, at 5,546,775 to 5,547,890
_4636
Echvi_4637: Echvi_4637 - 6-pyruvoyl-tetrahydropterin synthase, at 5,547,964 to 5,548,383
_4637
Echvi_4638: Echvi_4638 - SusD family., at 5,548,512 to 5,549,981
_4638
Position (kb)
5547
5548
5549 Strain fitness (log2 ratio)
-2
-1
0
1 at 5547.907 kb on - strand at 5547.936 kb on - strand at 5547.975 kb on - strand at 5548.117 kb on - strand, within Echvi_4637 at 5548.130 kb on - strand, within Echvi_4637 at 5548.130 kb on - strand, within Echvi_4637 at 5548.130 kb on - strand, within Echvi_4637 at 5548.156 kb on - strand, within Echvi_4637 at 5548.196 kb on - strand, within Echvi_4637 at 5548.261 kb on - strand, within Echvi_4637 at 5548.327 kb on - strand, within Echvi_4637 at 5548.327 kb on - strand, within Echvi_4637 at 5548.379 kb on - strand at 5548.433 kb on + strand at 5548.433 kb on + strand at 5548.480 kb on + strand at 5548.497 kb on - strand at 5548.501 kb on - strand at 5548.557 kb on + strand at 5548.558 kb on - strand at 5548.559 kb on + strand at 5548.559 kb on + strand at 5548.574 kb on + strand at 5548.574 kb on + strand at 5548.574 kb on + strand at 5548.574 kb on + strand at 5548.574 kb on + strand at 5548.575 kb on - strand at 5548.610 kb on + strand at 5548.611 kb on - strand at 5548.611 kb on - strand at 5548.658 kb on + strand at 5548.658 kb on + strand at 5548.659 kb on - strand, within Echvi_4638 at 5548.659 kb on - strand, within Echvi_4638 at 5548.663 kb on + strand, within Echvi_4638 at 5548.663 kb on + strand, within Echvi_4638 at 5548.670 kb on + strand, within Echvi_4638 at 5548.695 kb on - strand, within Echvi_4638 at 5548.747 kb on + strand, within Echvi_4638 at 5548.747 kb on + strand, within Echvi_4638 at 5548.775 kb on + strand, within Echvi_4638 at 5548.775 kb on + strand, within Echvi_4638 at 5548.797 kb on - strand, within Echvi_4638 at 5548.843 kb on - strand, within Echvi_4638 at 5548.843 kb on - strand, within Echvi_4638 at 5548.847 kb on - strand, within Echvi_4638 at 5548.867 kb on + strand, within Echvi_4638 at 5548.867 kb on + strand, within Echvi_4638 at 5548.873 kb on + strand, within Echvi_4638 at 5548.957 kb on + strand, within Echvi_4638 at 5549.007 kb on - strand, within Echvi_4638 at 5549.008 kb on + strand, within Echvi_4638 at 5549.008 kb on + strand, within Echvi_4638 at 5549.008 kb on + strand, within Echvi_4638 at 5549.021 kb on + strand, within Echvi_4638 at 5549.050 kb on + strand, within Echvi_4638 at 5549.050 kb on + strand, within Echvi_4638 at 5549.050 kb on + strand, within Echvi_4638 at 5549.054 kb on + strand, within Echvi_4638 at 5549.054 kb on + strand, within Echvi_4638 at 5549.054 kb on + strand, within Echvi_4638 at 5549.054 kb on + strand, within Echvi_4638 at 5549.054 kb on + strand, within Echvi_4638 at 5549.054 kb on + strand, within Echvi_4638 at 5549.055 kb on - strand, within Echvi_4638 at 5549.055 kb on - strand, within Echvi_4638 at 5549.056 kb on + strand, within Echvi_4638 at 5549.056 kb on + strand, within Echvi_4638 at 5549.057 kb on - strand, within Echvi_4638 at 5549.060 kb on + strand, within Echvi_4638 at 5549.060 kb on + strand, within Echvi_4638 at 5549.061 kb on - strand, within Echvi_4638 at 5549.061 kb on - strand, within Echvi_4638 at 5549.064 kb on + strand, within Echvi_4638 at 5549.064 kb on + strand, within Echvi_4638 at 5549.064 kb on + strand, within Echvi_4638 at 5549.064 kb on + strand, within Echvi_4638 at 5549.064 kb on + strand, within Echvi_4638 at 5549.148 kb on + strand, within Echvi_4638 at 5549.149 kb on - strand, within Echvi_4638 at 5549.149 kb on - strand, within Echvi_4638 at 5549.168 kb on + strand, within Echvi_4638 at 5549.169 kb on - strand, within Echvi_4638 at 5549.186 kb on + strand, within Echvi_4638 at 5549.207 kb on + strand, within Echvi_4638 at 5549.207 kb on + strand, within Echvi_4638 at 5549.208 kb on - strand, within Echvi_4638 at 5549.218 kb on + strand, within Echvi_4638 at 5549.219 kb on - strand, within Echvi_4638 at 5549.219 kb on - strand, within Echvi_4638 at 5549.228 kb on + strand, within Echvi_4638 at 5549.255 kb on + strand, within Echvi_4638 at 5549.263 kb on + strand, within Echvi_4638 at 5549.263 kb on + strand, within Echvi_4638 at 5549.264 kb on - strand, within Echvi_4638 at 5549.269 kb on + strand, within Echvi_4638 at 5549.270 kb on - strand, within Echvi_4638 at 5549.270 kb on - strand, within Echvi_4638 at 5549.270 kb on - strand, within Echvi_4638 at 5549.343 kb on + strand, within Echvi_4638 at 5549.344 kb on - strand, within Echvi_4638
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. benzoic 0.58 mg/ml remove 5,547,907 - -1.3 5,547,936 - -1.1 5,547,975 - -0.3 5,548,117 - Echvi_4637 0.36 +0.1 5,548,130 - Echvi_4637 0.40 -1.2 5,548,130 - Echvi_4637 0.40 -1.3 5,548,130 - Echvi_4637 0.40 +0.7 5,548,156 - Echvi_4637 0.46 -1.2 5,548,196 - Echvi_4637 0.55 -0.2 5,548,261 - Echvi_4637 0.71 +0.7 5,548,327 - Echvi_4637 0.86 -0.7 5,548,327 - Echvi_4637 0.86 -0.4 5,548,379 - -0.3 5,548,433 + -1.2 5,548,433 + -0.6 5,548,480 + -0.7 5,548,497 - -0.4 5,548,501 - -0.3 5,548,557 + +0.5 5,548,558 - -0.0 5,548,559 + -0.9 5,548,559 + +0.1 5,548,574 + -1.4 5,548,574 + +0.3 5,548,574 + +0.3 5,548,574 + +0.2 5,548,574 + -1.4 5,548,575 - +1.3 5,548,610 + +0.3 5,548,611 - +0.9 5,548,611 - +1.3 5,548,658 + -1.1 5,548,658 + -0.3 5,548,659 - Echvi_4638 0.10 +0.5 5,548,659 - Echvi_4638 0.10 +0.3 5,548,663 + Echvi_4638 0.10 -0.9 5,548,663 + Echvi_4638 0.10 -0.5 5,548,670 + Echvi_4638 0.11 +0.6 5,548,695 - Echvi_4638 0.12 +0.5 5,548,747 + Echvi_4638 0.16 -0.6 5,548,747 + Echvi_4638 0.16 -1.6 5,548,775 + Echvi_4638 0.18 +0.0 5,548,775 + Echvi_4638 0.18 -0.4 5,548,797 - Echvi_4638 0.19 -1.4 5,548,843 - Echvi_4638 0.23 +0.4 5,548,843 - Echvi_4638 0.23 -2.7 5,548,847 - Echvi_4638 0.23 -1.1 5,548,867 + Echvi_4638 0.24 -1.4 5,548,867 + Echvi_4638 0.24 -2.4 5,548,873 + Echvi_4638 0.25 -0.1 5,548,957 + Echvi_4638 0.30 -0.9 5,549,007 - Echvi_4638 0.34 +0.1 5,549,008 + Echvi_4638 0.34 -1.4 5,549,008 + Echvi_4638 0.34 -0.4 5,549,008 + Echvi_4638 0.34 +0.6 5,549,021 + Echvi_4638 0.35 +0.1 5,549,050 + Echvi_4638 0.37 -0.1 5,549,050 + Echvi_4638 0.37 -1.0 5,549,050 + Echvi_4638 0.37 -1.3 5,549,054 + Echvi_4638 0.37 -0.9 5,549,054 + Echvi_4638 0.37 -0.4 5,549,054 + Echvi_4638 0.37 -0.9 5,549,054 + Echvi_4638 0.37 -0.9 5,549,054 + Echvi_4638 0.37 +0.5 5,549,054 + Echvi_4638 0.37 -1.0 5,549,055 - Echvi_4638 0.37 +0.7 5,549,055 - Echvi_4638 0.37 +0.3 5,549,056 + Echvi_4638 0.37 -1.9 5,549,056 + Echvi_4638 0.37 +0.1 5,549,057 - Echvi_4638 0.37 -1.1 5,549,060 + Echvi_4638 0.37 +0.9 5,549,060 + Echvi_4638 0.37 -0.2 5,549,061 - Echvi_4638 0.37 -1.9 5,549,061 - Echvi_4638 0.37 +0.6 5,549,064 + Echvi_4638 0.38 +0.1 5,549,064 + Echvi_4638 0.38 +1.6 5,549,064 + Echvi_4638 0.38 +0.3 5,549,064 + Echvi_4638 0.38 -0.7 5,549,064 + Echvi_4638 0.38 +0.4 5,549,148 + Echvi_4638 0.43 -0.3 5,549,149 - Echvi_4638 0.43 -1.5 5,549,149 - Echvi_4638 0.43 -0.1 5,549,168 + Echvi_4638 0.45 -0.4 5,549,169 - Echvi_4638 0.45 -0.4 5,549,186 + Echvi_4638 0.46 -1.3 5,549,207 + Echvi_4638 0.47 -0.4 5,549,207 + Echvi_4638 0.47 -0.9 5,549,208 - Echvi_4638 0.47 -2.4 5,549,218 + Echvi_4638 0.48 -0.6 5,549,219 - Echvi_4638 0.48 -0.2 5,549,219 - Echvi_4638 0.48 +0.4 5,549,228 + Echvi_4638 0.49 -0.9 5,549,255 + Echvi_4638 0.51 -0.9 5,549,263 + Echvi_4638 0.51 +0.2 5,549,263 + Echvi_4638 0.51 -1.1 5,549,264 - Echvi_4638 0.51 -1.1 5,549,269 + Echvi_4638 0.51 +0.4 5,549,270 - Echvi_4638 0.52 +1.4 5,549,270 - Echvi_4638 0.52 -0.5 5,549,270 - Echvi_4638 0.52 -1.3 5,549,343 + Echvi_4638 0.57 -0.1 5,549,344 - Echvi_4638 0.57 +0.9
Or see this region's nucleotide sequence